RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 AIDAQ96BJ3 306 aa8.13□□□□□ -1.11
KDM3B-208ENST00000512928 PGAP2Q9UHJ9 254 aa8.13□□□□□ -1.11
KDM3B-208ENST00000512928 SCAF8Q9UPN6 1271 aaKnown RBP8.13□□□□□ -1.11
KDM3B-208ENST00000512928 PSME4Q14997 1843 aa8.13□□□□□ -1.11
KDM3B-208ENST00000512928 POLR2AP24928 1970 aaKnown RBP8.12□□□□□ -1.11
KDM3B-208ENST00000512928 HIBADHP31937 336 aaKnown RBP8.12□□□□□ -1.11
KDM3B-208ENST00000512928 RBM5P52756 815 aaKnown RBP eCLIP8.12□□□□□ -1.11
KDM3B-208ENST00000512928 NBPF9Q3BBW0 867 aa8.12□□□□□ -1.11
KDM3B-208ENST00000512928 CAVIN4Q5BKX8 364 aa8.12□□□□□ -1.11
KDM3B-208ENST00000512928 FTSJ3Q8IY81 847 aaKnown RBP8.12□□□□□ -1.11
KDM3B-208ENST00000512928 CAPNS2Q96L46 248 aa8.12□□□□□ -1.11
KDM3B-208ENST00000512928 MEIS3Q99687 375 aa8.12□□□□□ -1.11
KDM3B-208ENST00000512928 PRDM10Q9NQV6 1147 aa8.12□□□□□ -1.11
KDM3B-208ENST00000512928 IQSEC3Q9UPP2 1182 aaPredicted RBP8.12□□□□□ -1.11
KDM3B-208ENST00000512928 HDAC5Q9UQL6 1122 aa8.12□□□□□ -1.11
KDM3B-208ENST00000512928 RIPOR2Q9Y4F9 1068 aa8.12□□□□□ -1.11
KDM3B-208ENST00000512928 TLL2Q9Y6L7 1015 aa8.12□□□□□ -1.11
KDM3B-208ENST00000512928 ZNF609O15014 1411 aa8.12□□□□□ -1.11
KDM3B-208ENST00000512928 CCDC85CA6NKD9 419 aa8.11□□□□□ -1.11
KDM3B-208ENST00000512928 EYA2O00167 538 aa8.11□□□□□ -1.11
KDM3B-208ENST00000512928 PDE8BO95263 885 aa8.11□□□□□ -1.11
KDM3B-208ENST00000512928 TRIM27P14373 513 aa8.11□□□□□ -1.11
KDM3B-208ENST00000512928 IL1R1P14778 569 aa8.11□□□□□ -1.11
KDM3B-208ENST00000512928 ECE1P42892 770 aa8.11□□□□□ -1.11
KDM3B-208ENST00000512928 BRPF1P55201 1214 aaPredicted RBP8.11□□□□□ -1.11
KDM3B-208ENST00000512928 HUNKP57058 714 aa8.11□□□□□ -1.11
KDM3B-208ENST00000512928 CHAF1AQ13111 956 aaPredicted RBP8.11□□□□□ -1.11
KDM3B-208ENST00000512928 UBE4AQ14139 1066 aa8.11□□□□□ -1.11
KDM3B-208ENST00000512928 TTLL12Q14166 644 aaPredicted RBP8.11□□□□□ -1.11
KDM3B-208ENST00000512928 ZKSCAN2Q63HK3 967 aa8.11□□□□□ -1.11
KDM3B-208ENST00000512928 ATF7IPQ6VMQ6 1270 aa8.11□□□□□ -1.11
KDM3B-208ENST00000512928 C15orf52Q6ZUT6 534 aaKnown RBP8.11□□□□□ -1.11
KDM3B-208ENST00000512928 SAPCD2Q86UD0 394 aa8.11□□□□□ -1.11
KDM3B-208ENST00000512928 C2orf69Q8N8R5 385 aa8.11□□□□□ -1.11
KDM3B-208ENST00000512928 ARHGAP45Q92619 1136 aa8.11□□□□□ -1.11
KDM3B-208ENST00000512928 CDCA5Q96FF9 252 aa8.11□□□□□ -1.11
KDM3B-208ENST00000512928 GMLQ99445 158 aa8.11□□□□□ -1.11
KDM3B-208ENST00000512928 TNNQ9UQP3 1299 aa8.11□□□□□ -1.11
KDM3B-208ENST00000512928 IRS2Q9Y4H2 1338 aa8.1□□□□□ -1.11
KDM3B-208ENST00000512928 WNT10BO00744 389 aa8.1□□□□□ -1.11
KDM3B-208ENST00000512928 SRGAP3O43295 1099 aa8.1□□□□□ -1.11
KDM3B-208ENST00000512928 GNAI3P08754 354 aa8.1□□□□□ -1.11
KDM3B-208ENST00000512928 IFIT1P09914 478 aaKnown RBP8.1□□□□□ -1.11
KDM3B-208ENST00000512928 SLC5A1P13866 664 aa8.1□□□□□ -1.11
KDM3B-208ENST00000512928 PUM3Q15397 648 aaKnown RBP8.1□□□□□ -1.11
KDM3B-208ENST00000512928 DLGAP5Q15398 846 aa8.1□□□□□ -1.11
KDM3B-208ENST00000512928 MFSD14BQ5SR56 506 aa8.1□□□□□ -1.11
KDM3B-208ENST00000512928 PRAMEF18Q5VWM3 479 aa8.1□□□□□ -1.11
KDM3B-208ENST00000512928 INTS3Q68E01 1043 aaKnown RBP8.1□□□□□ -1.11
KDM3B-208ENST00000512928 CERS5Q8N5B7 392 aa8.1□□□□□ -1.11
KDM3B-208ENST00000512928 FAM84BQ96KN1 310 aaPredicted RBP8.1□□□□□ -1.11
KDM3B-208ENST00000512928 BEGAINQ9BUH8 593 aa8.1□□□□□ -1.11
KDM3B-208ENST00000512928 GBA2Q9HCG7 927 aaPredicted RBP8.1□□□□□ -1.11
KDM3B-208ENST00000512928 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.1□□□□□ -1.11
KDM3B-208ENST00000512928 PA2G4Q9UQ80 394 aaKnown RBP8.1□□□□□ -1.11
KDM3B-208ENST00000512928 ZNF646O15015 1829 aaPredicted RBP8.1□□□□□ -1.11
KDM3B-208ENST00000512928 CLRN2A0PK11 232 aa8.09□□□□□ -1.11
KDM3B-208ENST00000512928 MYO1BO43795 1136 aa8.09□□□□□ -1.11
KDM3B-208ENST00000512928 GNAI2P04899 355 aa8.09□□□□□ -1.11
KDM3B-208ENST00000512928 NF2P35240 595 aa8.09□□□□□ -1.11
KDM3B-208ENST00000512928 RFX5P48382 616 aaPredicted RBP8.09□□□□□ -1.11
KDM3B-208ENST00000512928 BCAMP50895 628 aa8.09□□□□□ -1.11
KDM3B-208ENST00000512928 PTPN12Q05209 780 aaKnown RBP8.09□□□□□ -1.11
KDM3B-208ENST00000512928 PRKG1Q13976 671 aa8.09□□□□□ -1.11
KDM3B-208ENST00000512928 CFAP100Q494V2 611 aa8.09□□□□□ -1.11
KDM3B-208ENST00000512928 ITPRIPQ8IWB1 547 aa8.09□□□□□ -1.11
KDM3B-208ENST00000512928 TMEM57Q8N5G2 664 aa8.09□□□□□ -1.11
KDM3B-208ENST00000512928 VEZTQ9HBM0 779 aa8.09□□□□□ -1.11
KDM3B-208ENST00000512928 CEP126Q9P2H0 1117 aa8.09□□□□□ -1.11
KDM3B-208ENST00000512928 TTF2Q9UNY4 1162 aaKnown RBP8.09□□□□□ -1.11
KDM3B-208ENST00000512928 PITPNM2Q9BZ72 1349 aa8.08□□□□□ -1.12
KDM3B-208ENST00000512928 SLC34A2O95436 690 aa8.08□□□□□ -1.12
KDM3B-208ENST00000512928 IL15P40933 162 aaPredicted RBP8.08□□□□□ -1.12
KDM3B-208ENST00000512928 ZNF157P51786 506 aaPredicted RBP8.08□□□□□ -1.12
KDM3B-208ENST00000512928 MAP2K1Q02750 393 aaPredicted RBP8.08□□□□□ -1.12
KDM3B-208ENST00000512928 ATP2B3Q16720 1220 aa8.08□□□□□ -1.12
KDM3B-208ENST00000512928 ATG9AQ7Z3C6 839 aa8.08□□□□□ -1.12
KDM3B-208ENST00000512928 APOBEC3FQ8IUX4 373 aaKnown RBP8.08□□□□□ -1.12
KDM3B-208ENST00000512928 DZIP1LQ8IYY4 767 aaKnown RBP8.08□□□□□ -1.12
KDM3B-208ENST00000512928 VGLL2Q8N8G2 317 aa8.08□□□□□ -1.12
KDM3B-208ENST00000512928 TDRD7Q8NHU6 1098 aaKnown RBP8.08□□□□□ -1.12
KDM3B-208ENST00000512928 LPIN2Q92539 896 aa8.08□□□□□ -1.12
KDM3B-208ENST00000512928 PCDHAC2Q9Y5I4 1007 aa8.08□□□□□ -1.12
KDM3B-208ENST00000512928 FAM205AQ6ZU69 1335 aa8.07□□□□□ -1.12
KDM3B-208ENST00000512928 SPDYE2BA6NHP3 402 aa8.07□□□□□ -1.12
KDM3B-208ENST00000512928 CIAO1O76071 339 aa8.07□□□□□ -1.12
KDM3B-208ENST00000512928 SPDYE6P0CI01 402 aa8.07□□□□□ -1.12
KDM3B-208ENST00000512928 MMP14P50281 582 aa8.07□□□□□ -1.12
KDM3B-208ENST00000512928 FKBP1AP62942 108 aaKnown RBP8.07□□□□□ -1.12
KDM3B-208ENST00000512928 OS9Q13438 667 aaPredicted RBP8.07□□□□□ -1.12
KDM3B-208ENST00000512928 RGMBQ6NW40 437 aa8.07□□□□□ -1.12
KDM3B-208ENST00000512928 FBXO33Q7Z6M2 555 aa8.07□□□□□ -1.12
KDM3B-208ENST00000512928 MCOLN1Q9GZU1 580 aa8.07□□□□□ -1.12
KDM3B-208ENST00000512928 C1orf115Q9H7X2 142 aa8.07□□□□□ -1.12
KDM3B-208ENST00000512928 GNL3LQ9NVN8 582 aaKnown RBP8.07□□□□□ -1.12
KDM3B-208ENST00000512928 ARAP2Q8WZ64 1704 aa8.06□□□□□ -1.12
KDM3B-208ENST00000512928 UBE2Q2LH0YL09 131 aa8.06□□□□□ -1.12
KDM3B-208ENST00000512928 FGFR2P21802 821 aa8.06□□□□□ -1.12
KDM3B-208ENST00000512928 TFCP2Q12800 502 aa8.06□□□□□ -1.12
KDM3B-208ENST00000512928 GORABQ5T7V8 394 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms