RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 OGFOD1Q8N543 542 aa16.61■□□□□ 0.25
RNF4-215ENST00000511843 TMEM57Q8N5G2 664 aa16.61■□□□□ 0.25
RNF4-215ENST00000511843 PCDHAC2Q9Y5I4 1007 aa16.61■□□□□ 0.25
RNF4-215ENST00000511843 TLL2Q9Y6L7 1015 aa16.61■□□□□ 0.25
RNF4-215ENST00000511843 THSD7BQ9C0I4 1608 aa16.6■□□□□ 0.25
RNF4-215ENST00000511843 WNT10BO00744 389 aa16.6■□□□□ 0.25
RNF4-215ENST00000511843 HIBADHP31937 336 aaKnown RBP16.6■□□□□ 0.25
RNF4-215ENST00000511843 SAPCD2Q86UD0 394 aa16.6■□□□□ 0.25
RNF4-215ENST00000511843 SULF1Q8IWU6 871 aa16.6■□□□□ 0.25
RNF4-215ENST00000511843 TDRD7Q8NHU6 1098 aaKnown RBP16.6■□□□□ 0.25
RNF4-215ENST00000511843 GNAI3P08754 354 aa16.59■□□□□ 0.25
RNF4-215ENST00000511843 PRAMEF18Q5VWM3 479 aa16.59■□□□□ 0.25
RNF4-215ENST00000511843 CDCA5Q96FF9 252 aa16.59■□□□□ 0.25
RNF4-215ENST00000511843 CAPNS2Q96L46 248 aa16.59■□□□□ 0.25
RNF4-215ENST00000511843 WDR33Q9C0J8 1336 aaKnown RBP16.59■□□□□ 0.25
RNF4-215ENST00000511843 RLBP1P12271 317 aa16.58■□□□□ 0.24
RNF4-215ENST00000511843 FGFR2P21802 821 aa16.58■□□□□ 0.24
RNF4-215ENST00000511843 BCAMP50895 628 aa16.58■□□□□ 0.24
RNF4-215ENST00000511843 CHAF1AQ13111 956 aaPredicted RBP16.58■□□□□ 0.24
RNF4-215ENST00000511843 PUM3Q15397 648 aaKnown RBP16.58■□□□□ 0.24
RNF4-215ENST00000511843 FBXO33Q7Z6M2 555 aa16.58■□□□□ 0.24
RNF4-215ENST00000511843 VPS37DQ86XT2 251 aa16.58■□□□□ 0.24
RNF4-215ENST00000511843 HDAC9Q9UKV0 1011 aa16.58■□□□□ 0.24
RNF4-215ENST00000511843 AOX1Q06278 1338 aa16.58■□□□□ 0.24
RNF4-215ENST00000511843 FAM205AQ6ZU69 1335 aa16.58■□□□□ 0.24
RNF4-215ENST00000511843 SRGAP3O43295 1099 aa16.57■□□□□ 0.24
RNF4-215ENST00000511843 GRIK5Q16478 980 aa16.57■□□□□ 0.24
RNF4-215ENST00000511843 MFSD14BQ5SR56 506 aa16.57■□□□□ 0.24
RNF4-215ENST00000511843 PITPNM2Q9BZ72 1349 aa16.56■□□□□ 0.24
RNF4-215ENST00000511843 AOC2O75106 756 aa16.56■□□□□ 0.24
RNF4-215ENST00000511843 HUNKP57058 714 aa16.56■□□□□ 0.24
RNF4-215ENST00000511843 CAVIN4Q5BKX8 364 aa16.56■□□□□ 0.24
RNF4-215ENST00000511843 ZBED3Q96IU2 234 aaPredicted RBP16.56■□□□□ 0.24
RNF4-215ENST00000511843 GBA2Q9HCG7 927 aaPredicted RBP16.56■□□□□ 0.24
RNF4-215ENST00000511843 HDAC5Q9UQL6 1122 aa16.56■□□□□ 0.24
RNF4-215ENST00000511843 FRAT2O75474 233 aaPredicted RBP16.55■□□□□ 0.24
RNF4-215ENST00000511843 CIAO1O76071 339 aa16.55■□□□□ 0.24
RNF4-215ENST00000511843 IFIT1P09914 478 aaKnown RBP16.55■□□□□ 0.24
RNF4-215ENST00000511843 FKBP1AP62942 108 aaKnown RBP16.55■□□□□ 0.24
RNF4-215ENST00000511843 DLGAP5Q15398 846 aa16.55■□□□□ 0.24
RNF4-215ENST00000511843 CFAP100Q494V2 611 aa16.55■□□□□ 0.24
RNF4-215ENST00000511843 MOB2Q70IA6 237 aa16.55■□□□□ 0.24
RNF4-215ENST00000511843 FTSJ3Q8IY81 847 aaKnown RBP16.55■□□□□ 0.24
RNF4-215ENST00000511843 C1orf115Q9H7X2 142 aa16.55■□□□□ 0.24
RNF4-215ENST00000511843 PAPPA2Q9BXP8 1791 aa16.55■□□□□ 0.24
RNF4-215ENST00000511843 COL1A1P02452 1464 aaPredicted RBP16.54■□□□□ 0.24
RNF4-215ENST00000511843 PNMA6EA0A0J9YXQ4 647 aa16.54■□□□□ 0.24
RNF4-215ENST00000511843 CLRN2A0PK11 232 aa16.54■□□□□ 0.24
RNF4-215ENST00000511843 FOXN1O15353 648 aa16.54■□□□□ 0.24
RNF4-215ENST00000511843 GNAI2P04899 355 aa16.54■□□□□ 0.24
RNF4-215ENST00000511843 SLC5A1P13866 664 aa16.54■□□□□ 0.24
RNF4-215ENST00000511843 ECE1P42892 770 aa16.54■□□□□ 0.24
RNF4-215ENST00000511843 RBM5P52756 815 aaKnown RBP eCLIP16.54■□□□□ 0.24
RNF4-215ENST00000511843 ATP2B3Q16720 1220 aa16.54■□□□□ 0.24
RNF4-215ENST00000511843 ITPRIPQ8IWB1 547 aa16.54■□□□□ 0.24
RNF4-215ENST00000511843 DZIP1LQ8IYY4 767 aaKnown RBP16.54■□□□□ 0.24
RNF4-215ENST00000511843 C2orf69Q8N8R5 385 aa16.54■□□□□ 0.24
RNF4-215ENST00000511843 COPRSQ9NQ92 184 aa16.54■□□□□ 0.24
RNF4-215ENST00000511843 CEP126Q9P2H0 1117 aa16.54■□□□□ 0.24
RNF4-215ENST00000511843 TTF2Q9UNY4 1162 aaKnown RBP16.54■□□□□ 0.24
RNF4-215ENST00000511843 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.54■□□□□ 0.24
RNF4-215ENST00000511843 ADORA1P30542 326 aa16.53■□□□□ 0.24
RNF4-215ENST00000511843 MTX1Q13505 466 aa16.53■□□□□ 0.24
RNF4-215ENST00000511843 COL13A1Q5TAT6 717 aaPredicted RBP16.53■□□□□ 0.24
RNF4-215ENST00000511843 PANK1Q8TE04 598 aa16.53■□□□□ 0.24
RNF4-215ENST00000511843 LPIN2Q92539 896 aa16.53■□□□□ 0.24
RNF4-215ENST00000511843 PRMT6Q96LA8 375 aaPredicted RBP16.53■□□□□ 0.24
RNF4-215ENST00000511843 IL15P40933 162 aaPredicted RBP16.52■□□□□ 0.24
RNF4-215ENST00000511843 ZIC5Q96T25 663 aa16.52■□□□□ 0.24
RNF4-215ENST00000511843 WBP1LQ9NX94 342 aa16.52■□□□□ 0.24
RNF4-215ENST00000511843 FBXO3Q9UK99 471 aa16.52■□□□□ 0.24
RNF4-215ENST00000511843 SPDYE2BA6NHP3 402 aa16.51■□□□□ 0.23
RNF4-215ENST00000511843 SPDYE6P0CI01 402 aa16.51■□□□□ 0.23
RNF4-215ENST00000511843 MMP14P50281 582 aa16.51■□□□□ 0.23
RNF4-215ENST00000511843 TFCP2Q12800 502 aa16.51■□□□□ 0.23
RNF4-215ENST00000511843 PRKG1Q13976 671 aa16.51■□□□□ 0.23
RNF4-215ENST00000511843 MTMR14Q8NCE2 650 aa16.51■□□□□ 0.23
RNF4-215ENST00000511843 HHIPL1Q96JK4 782 aa16.51■□□□□ 0.23
RNF4-215ENST00000511843 FZD1Q9UP38 647 aa16.51■□□□□ 0.23
RNF4-215ENST00000511843 PHKA1P46020 1223 aa16.5■□□□□ 0.23
RNF4-215ENST00000511843 TIMM10P62072 90 aa16.5■□□□□ 0.23
RNF4-215ENST00000511843 RGMBQ6NW40 437 aa16.5■□□□□ 0.23
RNF4-215ENST00000511843 APOBEC3FQ8IUX4 373 aaKnown RBP16.5■□□□□ 0.23
RNF4-215ENST00000511843 VEZTQ9HBM0 779 aa16.5■□□□□ 0.23
RNF4-215ENST00000511843 MYH2Q9UKX2 1941 aa16.5■□□□□ 0.23
RNF4-215ENST00000511843 AKAP11Q9UKA4 1901 aa16.49■□□□□ 0.23
RNF4-215ENST00000511843 FAM155AB1AL88 458 aaPredicted RBP16.49■□□□□ 0.23
RNF4-215ENST00000511843 UBE2Q2LH0YL09 131 aa16.49■□□□□ 0.23
RNF4-215ENST00000511843 CRKP46108 304 aa16.49■□□□□ 0.23
RNF4-215ENST00000511843 ZNF157P51786 506 aaPredicted RBP16.49■□□□□ 0.23
RNF4-215ENST00000511843 TTLL12Q14166 644 aaPredicted RBP16.49■□□□□ 0.23
RNF4-215ENST00000511843 AIDAQ96BJ3 306 aa16.49■□□□□ 0.23
RNF4-215ENST00000511843 TDRD3Q9H7E2 651 aaKnown RBP16.49■□□□□ 0.23
RNF4-215ENST00000511843 OTOFQ9HC10 1997 aa16.49■□□□□ 0.23
RNF4-215ENST00000511843 SSC5DA1L4H1 1573 aa16.48■□□□□ 0.23
RNF4-215ENST00000511843 ZBTB7BO15156 539 aaPredicted RBP16.48■□□□□ 0.23
RNF4-215ENST00000511843 MAP2K1Q02750 393 aaPredicted RBP16.48■□□□□ 0.23
RNF4-215ENST00000511843 TBC1D22AQ8WUA7 517 aa16.48■□□□□ 0.23
RNF4-215ENST00000511843 DEFB129Q9H1M3 183 aa16.48■□□□□ 0.23
RNF4-215ENST00000511843 TSKSQ9UJT2 592 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms