RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 SP8Q8IXZ3 490 aa11.07□□□□□ -0.64
NR1I3-228ENST00000511676 CCDC24Q8N4L8 307 aa11.07□□□□□ -0.64
NR1I3-228ENST00000511676 KLHDC4Q8TBB5 520 aa11.07□□□□□ -0.64
NR1I3-228ENST00000511676 ATP6V0A2Q9Y487 856 aa11.07□□□□□ -0.64
NR1I3-228ENST00000511676 REC8O95072 547 aa11.06□□□□□ -0.64
NR1I3-228ENST00000511676 PDE8BO95263 885 aa11.06□□□□□ -0.64
NR1I3-228ENST00000511676 MMP14P50281 582 aa11.06□□□□□ -0.64
NR1I3-228ENST00000511676 NUTM1Q86Y26 1132 aa11.06□□□□□ -0.64
NR1I3-228ENST00000511676 MPNDQ8N594 471 aa11.06□□□□□ -0.64
NR1I3-228ENST00000511676 VGLL2Q8N8G2 317 aa11.06□□□□□ -0.64
NR1I3-228ENST00000511676 EVI5LQ96CN4 794 aa11.06□□□□□ -0.64
NR1I3-228ENST00000511676 GPR101Q96P66 508 aaPredicted RBP11.06□□□□□ -0.64
NR1I3-228ENST00000511676 EYA3Q99504 573 aa11.06□□□□□ -0.64
NR1I3-228ENST00000511676 MPHOSPH8Q99549 860 aa11.06□□□□□ -0.64
NR1I3-228ENST00000511676 CNNM1Q9NRU3 951 aa11.06□□□□□ -0.64
NR1I3-228ENST00000511676 BSDC1Q9NW68 430 aaPredicted RBP11.06□□□□□ -0.64
NR1I3-228ENST00000511676 DBNLQ9UJU6 430 aaKnown RBP11.06□□□□□ -0.64
NR1I3-228ENST00000511676 ARAP2Q8WZ64 1704 aa11.06□□□□□ -0.64
NR1I3-228ENST00000511676 G3V3G9 751 aa11.05□□□□□ -0.64
NR1I3-228ENST00000511676 ANP32AP39687 249 aaKnown RBP11.05□□□□□ -0.64
NR1I3-228ENST00000511676 PUM3Q15397 648 aaKnown RBP11.05□□□□□ -0.64
NR1I3-228ENST00000511676 LRRC24Q50LG9 513 aa11.05□□□□□ -0.64
NR1I3-228ENST00000511676 METTL24Q5JXM2 366 aa11.05□□□□□ -0.64
NR1I3-228ENST00000511676 DCAF8Q5TAQ9 597 aa11.05□□□□□ -0.64
NR1I3-228ENST00000511676 CIAPIN1Q6FI81 312 aa11.05□□□□□ -0.64
NR1I3-228ENST00000511676 ANKRD18AQ8IVF6 992 aa11.05□□□□□ -0.64
NR1I3-228ENST00000511676 RTFDC1Q9BY42 306 aaPredicted RBP11.05□□□□□ -0.64
NR1I3-228ENST00000511676 RTN4Q9NQC3 1192 aaKnown RBP11.05□□□□□ -0.64
NR1I3-228ENST00000511676 RAD50Q92878 1312 aa11.05□□□□□ -0.64
NR1I3-228ENST00000511676 A0A1B0GUL7 405 aa11.04□□□□□ -0.64
NR1I3-228ENST00000511676 FOXN1O15353 648 aa11.04□□□□□ -0.64
NR1I3-228ENST00000511676 IGSF3O75054 1194 aa11.04□□□□□ -0.64
NR1I3-228ENST00000511676 FGFR2P21802 821 aa11.04□□□□□ -0.64
NR1I3-228ENST00000511676 RPS12P25398 132 aaKnown RBP11.04□□□□□ -0.64
NR1I3-228ENST00000511676 RBM25P49756 843 aaKnown RBP11.04□□□□□ -0.64
NR1I3-228ENST00000511676 ATP2B3Q16720 1220 aa11.04□□□□□ -0.64
NR1I3-228ENST00000511676 LRRFIP1Q32MZ4 808 aaKnown RBP11.04□□□□□ -0.64
NR1I3-228ENST00000511676 MAP1SQ66K74 1059 aaPredicted RBP11.04□□□□□ -0.64
NR1I3-228ENST00000511676 RUFY2Q8WXA3 655 aa11.04□□□□□ -0.64
NR1I3-228ENST00000511676 LPIN2Q92539 896 aa11.04□□□□□ -0.64
NR1I3-228ENST00000511676 DPF2Q92785 391 aa11.04□□□□□ -0.64
NR1I3-228ENST00000511676 ZNF594Q96JF6 807 aaPredicted RBP11.04□□□□□ -0.64
NR1I3-228ENST00000511676 TBC1D32Q96NH3 1257 aa11.04□□□□□ -0.64
NR1I3-228ENST00000511676 SLX4Q8IY92 1834 aa11.04□□□□□ -0.64
NR1I3-228ENST00000511676 UQCRFS1P1P0C7P4 283 aa11.03□□□□□ -0.64
NR1I3-228ENST00000511676 CHMLP26374 656 aa11.03□□□□□ -0.64
NR1I3-228ENST00000511676 LBX1P52954 281 aa11.03□□□□□ -0.64
NR1I3-228ENST00000511676 NOGQ13253 232 aa11.03□□□□□ -0.64
NR1I3-228ENST00000511676 CCDC158Q5M9N0 1113 aa11.03□□□□□ -0.64
NR1I3-228ENST00000511676 CCDC102AQ96A19 550 aa11.03□□□□□ -0.64
NR1I3-228ENST00000511676 CAPNS2Q96L46 248 aa11.03□□□□□ -0.64
NR1I3-228ENST00000511676 HAUS7Q99871 368 aa11.03□□□□□ -0.64
NR1I3-228ENST00000511676 PUS3Q9BZE2 481 aaKnown RBP11.03□□□□□ -0.64
NR1I3-228ENST00000511676 ANKRD2Q9GZV1 360 aa11.03□□□□□ -0.64
NR1I3-228ENST00000511676 CCDC8Q9H0W5 538 aaPredicted RBP11.03□□□□□ -0.64
NR1I3-228ENST00000511676 SNRKQ9NRH2 765 aa11.03□□□□□ -0.64
NR1I3-228ENST00000511676 GPRC5DQ9NZD1 345 aa11.03□□□□□ -0.64
NR1I3-228ENST00000511676 TLL2Q9Y6L7 1015 aa11.03□□□□□ -0.64
NR1I3-228ENST00000511676 PCNTO95613 3336 aa11.03□□□□□ -0.64
NR1I3-228ENST00000511676 TRIM6-TRIM34B2RNG4 842 aa11.02□□□□□ -0.65
NR1I3-228ENST00000511676 IFIT1P09914 478 aaKnown RBP11.02□□□□□ -0.65
NR1I3-228ENST00000511676 SLC5A1P13866 664 aa11.02□□□□□ -0.65
NR1I3-228ENST00000511676 RPS8P62241 208 aaKnown RBP11.02□□□□□ -0.65
NR1I3-228ENST00000511676 KIAA2012Q0VF49 1180 aa11.02□□□□□ -0.65
NR1I3-228ENST00000511676 GRAPQ13588 217 aa11.02□□□□□ -0.65
NR1I3-228ENST00000511676 UBE4AQ14139 1066 aa11.02□□□□□ -0.65
NR1I3-228ENST00000511676 TMED8Q6PL24 325 aaPredicted RBP11.02□□□□□ -0.65
NR1I3-228ENST00000511676 C2orf69Q8N8R5 385 aa11.02□□□□□ -0.65
NR1I3-228ENST00000511676 GRAPLQ8TC17 118 aaPredicted RBP11.02□□□□□ -0.65
NR1I3-228ENST00000511676 DDRGK1Q96HY6 314 aa11.02□□□□□ -0.65
NR1I3-228ENST00000511676 DBNDD2Q9BQY9 259 aa11.02□□□□□ -0.65
NR1I3-228ENST00000511676 TLR7Q9NYK1 1049 aaKnown RBP11.02□□□□□ -0.65
NR1I3-228ENST00000511676 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.02□□□□□ -0.65
NR1I3-228ENST00000511676 ZNF541Q9H0D2 1346 aa11.02□□□□□ -0.65
NR1I3-228ENST00000511676 ANKRD31Q8N7Z5 1873 aa11.02□□□□□ -0.65
NR1I3-228ENST00000511676 POTEIP0CG38 1075 aa11.01□□□□□ -0.65
NR1I3-228ENST00000511676 POTEJP0CG39 1038 aa11.01□□□□□ -0.65
NR1I3-228ENST00000511676 ARID4AP29374 1257 aaPredicted RBP11.01□□□□□ -0.65
NR1I3-228ENST00000511676 WASHC4Q2M389 1173 aa11.01□□□□□ -0.65
NR1I3-228ENST00000511676 DCPSQ96C86 337 aaKnown RBP11.01□□□□□ -0.65
NR1I3-228ENST00000511676 XAGE2Q96GT9 111 aa11.01□□□□□ -0.65
NR1I3-228ENST00000511676 ESYT1Q9BSJ8 1104 aa11.01□□□□□ -0.65
NR1I3-228ENST00000511676 SEC31BQ9NQW1 1179 aa11.01□□□□□ -0.65
NR1I3-228ENST00000511676 PGAP2Q9UHJ9 254 aa11.01□□□□□ -0.65
NR1I3-228ENST00000511676 PDS5AQ29RF7 1337 aaKnown RBP11.01□□□□□ -0.65
NR1I3-228ENST00000511676 ZFYP08048 801 aaPredicted RBP11□□□□□ -0.65
NR1I3-228ENST00000511676 SCNN1DP51172 638 aa11□□□□□ -0.65
NR1I3-228ENST00000511676 MLLT1Q03111 559 aaPredicted RBP11□□□□□ -0.65
NR1I3-228ENST00000511676 TTF1Q15361 905 aaPredicted RBP11□□□□□ -0.65
NR1I3-228ENST00000511676 GORABQ5T7V8 394 aa11□□□□□ -0.65
NR1I3-228ENST00000511676 TSHZ3Q63HK5 1081 aa11□□□□□ -0.65
NR1I3-228ENST00000511676 KBTBD3Q8NAB2 608 aa11□□□□□ -0.65
NR1I3-228ENST00000511676 RILPL2Q969X0 211 aa11□□□□□ -0.65
NR1I3-228ENST00000511676 IL17RAQ96F46 866 aa11□□□□□ -0.65
NR1I3-228ENST00000511676 NEUROD6Q96NK8 337 aa11□□□□□ -0.65
NR1I3-228ENST00000511676 CCDC85AQ96PX6 553 aaPredicted RBP11□□□□□ -0.65
NR1I3-228ENST00000511676 C22orf23Q9BZE7 217 aa11□□□□□ -0.65
NR1I3-228ENST00000511676 ZC3H12CQ9C0D7 883 aaKnown RBP11□□□□□ -0.65
NR1I3-228ENST00000511676 DIAPH3Q9NSV4 1193 aa11□□□□□ -0.65
NR1I3-228ENST00000511676 ZNF804BA4D1E1 1349 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms