RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 HDAC1Q13547 482 aaPredicted RBP15.81■□□□□ 0.12
COL6A6-203ENST00000511332 CCDC102BQ68D86 513 aa15.81■□□□□ 0.12
COL6A6-203ENST00000511332 CLASRPQ8N2M8 674 aaKnown RBP15.81■□□□□ 0.12
COL6A6-203ENST00000511332 TBC1D22AQ8WUA7 517 aa15.81■□□□□ 0.12
COL6A6-203ENST00000511332 LRRCC1Q9C099 1032 aa15.81■□□□□ 0.12
COL6A6-203ENST00000511332 ZBTB12Q9Y330 459 aaPredicted RBP15.81■□□□□ 0.12
COL6A6-203ENST00000511332 PDS5AQ29RF7 1337 aaKnown RBP15.8■□□□□ 0.12
COL6A6-203ENST00000511332 POTECB2RU33 542 aa15.8■□□□□ 0.12
COL6A6-203ENST00000511332 H7C1D1 291 aa15.8■□□□□ 0.12
COL6A6-203ENST00000511332 APBB1O00213 710 aa15.8■□□□□ 0.12
COL6A6-203ENST00000511332 KIF3CO14782 793 aa15.8■□□□□ 0.12
COL6A6-203ENST00000511332 EPHX2P34913 555 aa15.8■□□□□ 0.12
COL6A6-203ENST00000511332 PHKA1P46020 1223 aa15.8■□□□□ 0.12
COL6A6-203ENST00000511332 MMP14P50281 582 aa15.8■□□□□ 0.12
COL6A6-203ENST00000511332 PNMA8AQ86V59 439 aaPredicted RBP15.8■□□□□ 0.12
COL6A6-203ENST00000511332 MICALL2Q8IY33 904 aa15.8■□□□□ 0.12
COL6A6-203ENST00000511332 TAF1DQ9H5J8 278 aaPredicted RBP15.8■□□□□ 0.12
COL6A6-203ENST00000511332 DCTPP1Q9H773 170 aa15.8■□□□□ 0.12
COL6A6-203ENST00000511332 IQSEC3Q9UPP2 1182 aaPredicted RBP15.8■□□□□ 0.12
COL6A6-203ENST00000511332 DOCK2Q92608 1830 aa15.8■□□□□ 0.12
COL6A6-203ENST00000511332 CHAF1AQ13111 956 aaPredicted RBP15.79■□□□□ 0.12
COL6A6-203ENST00000511332 CCDC158Q5M9N0 1113 aa15.79■□□□□ 0.12
COL6A6-203ENST00000511332 MFSD14BQ5SR56 506 aa15.79■□□□□ 0.12
COL6A6-203ENST00000511332 AACSQ86V21 672 aa15.79■□□□□ 0.12
COL6A6-203ENST00000511332 GMLQ99445 158 aa15.79■□□□□ 0.12
COL6A6-203ENST00000511332 IL1RAPL2Q9NP60 686 aa15.79■□□□□ 0.12
COL6A6-203ENST00000511332 ADARB2Q9NS39 739 aaKnown RBP15.79■□□□□ 0.12
COL6A6-203ENST00000511332 CNOT7Q9UIV1 285 aaKnown RBP15.79■□□□□ 0.12
COL6A6-203ENST00000511332 DENND2AQ9ULE3 1009 aa15.79■□□□□ 0.12
COL6A6-203ENST00000511332 USP17L8P0C7I0 530 aa15.78■□□□□ 0.12
COL6A6-203ENST00000511332 UQCRFS1P1P0C7P4 283 aa15.78■□□□□ 0.12
COL6A6-203ENST00000511332 ARID4AP29374 1257 aaPredicted RBP15.78■□□□□ 0.12
COL6A6-203ENST00000511332 EPS15P42566 896 aa15.78■□□□□ 0.12
COL6A6-203ENST00000511332 USP50Q70EL3 339 aaPredicted RBP15.78■□□□□ 0.12
COL6A6-203ENST00000511332 OGFOD1Q8N543 542 aa15.78■□□□□ 0.12
COL6A6-203ENST00000511332 WDR66Q8TBY9 1149 aa15.78■□□□□ 0.12
COL6A6-203ENST00000511332 EAF2Q96CJ1 260 aaPredicted RBP15.78■□□□□ 0.12
COL6A6-203ENST00000511332 GCC1Q96CN9 775 aa15.78■□□□□ 0.12
COL6A6-203ENST00000511332 DBNDD2Q9BQY9 259 aa15.78■□□□□ 0.12
COL6A6-203ENST00000511332 RWDD1Q9H446 243 aaPredicted RBP15.78■□□□□ 0.12
COL6A6-203ENST00000511332 HDAC9Q9UKV0 1011 aa15.78■□□□□ 0.12
COL6A6-203ENST00000511332 MYH2Q9UKX2 1941 aa15.78■□□□□ 0.12
COL6A6-203ENST00000511332 MYO5AQ9Y4I1 1855 aaKnown RBP15.78■□□□□ 0.12
COL6A6-203ENST00000511332 MYH7P12883 1935 aa15.77■□□□□ 0.12
COL6A6-203ENST00000511332 NEFLP07196 543 aa15.77■□□□□ 0.12
COL6A6-203ENST00000511332 IFIT2P09913 472 aaKnown RBP15.77■□□□□ 0.12
COL6A6-203ENST00000511332 RASGRF1Q13972 1273 aa15.77■□□□□ 0.12
COL6A6-203ENST00000511332 TTC39AQ5SRH9 613 aa15.77■□□□□ 0.12
COL6A6-203ENST00000511332 MXD3Q9BW11 206 aa15.77■□□□□ 0.12
COL6A6-203ENST00000511332 DBNLQ9UJU6 430 aaKnown RBP15.77■□□□□ 0.12
COL6A6-203ENST00000511332 JAG2Q9Y219 1238 aa15.77■□□□□ 0.12
COL6A6-203ENST00000511332 MAST3O60307 1309 aa15.76■□□□□ 0.11
COL6A6-203ENST00000511332 SALL1Q9NSC2 1324 aa15.76■□□□□ 0.11
COL6A6-203ENST00000511332 TOMM70O94826 608 aa15.76■□□□□ 0.11
COL6A6-203ENST00000511332 ZNF280AP59817 542 aaPredicted RBP15.76■□□□□ 0.11
COL6A6-203ENST00000511332 KIF4BQ2VIQ3 1234 aa15.76■□□□□ 0.11
COL6A6-203ENST00000511332 EAPPQ56P03 285 aaPredicted RBP15.76■□□□□ 0.11
COL6A6-203ENST00000511332 LDHDQ86WU2 507 aa15.76■□□□□ 0.11
COL6A6-203ENST00000511332 KIAA0825Q8IV33 1275 aa15.76■□□□□ 0.11
COL6A6-203ENST00000511332 ZGPATQ8N5A5 531 aaKnown RBP15.76■□□□□ 0.11
COL6A6-203ENST00000511332 CERS5Q8N5B7 392 aa15.76■□□□□ 0.11
COL6A6-203ENST00000511332 ZNF512BQ96KM6 892 aaPredicted RBP15.76■□□□□ 0.11
COL6A6-203ENST00000511332 CCDC8Q9H0W5 538 aaPredicted RBP15.76■□□□□ 0.11
COL6A6-203ENST00000511332 TLR7Q9NYK1 1049 aaKnown RBP15.76■□□□□ 0.11
COL6A6-203ENST00000511332 ZBTB47Q9UFB7 747 aaPredicted RBP15.76■□□□□ 0.11
COL6A6-203ENST00000511332 SUGT1Q9Y2Z0 365 aa15.76■□□□□ 0.11
COL6A6-203ENST00000511332 TRPM7Q96QT4 1865 aa15.76■□□□□ 0.11
COL6A6-203ENST00000511332 RBM46Q8TBY0 533 aaKnown RBP15.75■□□□□ 0.11
COL6A6-203ENST00000511332 MYOZ2Q9NPC6 264 aa15.75■□□□□ 0.11
COL6A6-203ENST00000511332 POLR2AP24928 1970 aaKnown RBP15.75■□□□□ 0.11
COL6A6-203ENST00000511332 SHTN1A0MZ66 631 aa15.74■□□□□ 0.11
COL6A6-203ENST00000511332 SPATA5Q8NB90 893 aa15.74■□□□□ 0.11
COL6A6-203ENST00000511332 SMC1BQ8NDV3 1235 aa15.74■□□□□ 0.11
COL6A6-203ENST00000511332 TRPM4Q8TD43 1214 aa15.74■□□□□ 0.11
COL6A6-203ENST00000511332 F8W031 263 aaPredicted RBP15.73■□□□□ 0.11
COL6A6-203ENST00000511332 MCAMP43121 646 aa15.73■□□□□ 0.11
COL6A6-203ENST00000511332 TBC1D10BQ4KMP7 808 aaPredicted RBP15.73■□□□□ 0.11
COL6A6-203ENST00000511332 SAMD7Q7Z3H4 446 aa15.73■□□□□ 0.11
COL6A6-203ENST00000511332 GPATCH3Q96I76 525 aa15.73■□□□□ 0.11
COL6A6-203ENST00000511332 BCL11AQ9H165 835 aa15.73■□□□□ 0.11
COL6A6-203ENST00000511332 HMG20BQ9P0W2 317 aa15.73■□□□□ 0.11
COL6A6-203ENST00000511332 TTF2Q9UNY4 1162 aaKnown RBP15.73■□□□□ 0.11
COL6A6-203ENST00000511332 SMARCA5O60264 1052 aaPredicted RBP15.72■□□□□ 0.11
COL6A6-203ENST00000511332 FSTL1Q12841 308 aa15.72■□□□□ 0.11
COL6A6-203ENST00000511332 SPTY2D1Q68D10 685 aaPredicted RBP15.72■□□□□ 0.11
COL6A6-203ENST00000511332 CHADLQ6NUI6 762 aa15.72■□□□□ 0.11
COL6A6-203ENST00000511332 ZC3H15Q8WU90 426 aaKnown RBP15.72■□□□□ 0.11
COL6A6-203ENST00000511332 SERPINA10Q9UK55 444 aa15.72■□□□□ 0.11
COL6A6-203ENST00000511332 CLEC11AQ9Y240 323 aa15.72■□□□□ 0.11
COL6A6-203ENST00000511332 LDHBP07195 334 aaKnown RBP15.71■□□□□ 0.11
COL6A6-203ENST00000511332 POTEIP0CG38 1075 aa15.71■□□□□ 0.11
COL6A6-203ENST00000511332 POTEJP0CG39 1038 aa15.71■□□□□ 0.11
COL6A6-203ENST00000511332 HDLBPQ00341 1268 aaKnown RBP15.71■□□□□ 0.11
COL6A6-203ENST00000511332 SCARF1Q14162 830 aa15.71■□□□□ 0.11
COL6A6-203ENST00000511332 SMC5Q8IY18 1101 aa15.71■□□□□ 0.11
COL6A6-203ENST00000511332 MTMR14Q8NCE2 650 aa15.71■□□□□ 0.11
COL6A6-203ENST00000511332 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.71■□□□□ 0.11
COL6A6-203ENST00000511332 AK9Q5TCS8 1911 aa15.7■□□□□ 0.1
COL6A6-203ENST00000511332 EGFRP00533 1210 aa15.7■□□□□ 0.1
COL6A6-203ENST00000511332 PRDX5P30044 214 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms