RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 C9orf78Q9NZ63 289 aaPredicted RBP15.29■□□□□ 0.04
HMGB2-205ENST00000511316 LRRC37AA6NMS7 1700 aa15.29■□□□□ 0.04
HMGB2-205ENST00000511316 ZC3H4Q9UPT8 1303 aaKnown RBP15.29■□□□□ 0.04
HMGB2-205ENST00000511316 FZD9O00144 591 aa15.29■□□□□ 0.04
HMGB2-205ENST00000511316 RUFY2Q8WXA3 655 aa15.29■□□□□ 0.04
HMGB2-205ENST00000511316 BSDC1Q9NW68 430 aaPredicted RBP15.29■□□□□ 0.04
HMGB2-205ENST00000511316 PODXL2Q9NZ53 605 aa15.29■□□□□ 0.04
HMGB2-205ENST00000511316 LTBP1Q14766 1721 aa15.28■□□□□ 0.04
HMGB2-205ENST00000511316 DICER1Q9UPY3 1922 aaKnown RBP15.28■□□□□ 0.04
HMGB2-205ENST00000511316 GLTPD2A6NH11 291 aa15.28■□□□□ 0.04
HMGB2-205ENST00000511316 TRIM6-TRIM34B2RNG4 842 aa15.28■□□□□ 0.04
HMGB2-205ENST00000511316 IARSP41252 1262 aaKnown RBP15.28■□□□□ 0.04
HMGB2-205ENST00000511316 UBE2HP62256 183 aa15.28■□□□□ 0.04
HMGB2-205ENST00000511316 MPNDQ8N594 471 aa15.28■□□□□ 0.04
HMGB2-205ENST00000511316 ZSCAN31Q96LW9 406 aaPredicted RBP15.28■□□□□ 0.04
HMGB2-205ENST00000511316 MINPP1Q9UNW1 487 aa15.28■□□□□ 0.04
HMGB2-205ENST00000511316 R3HCC1Q9Y3T6 440 aaKnown RBP15.28■□□□□ 0.04
HMGB2-205ENST00000511316 RAD50Q92878 1312 aa15.27■□□□□ 0.04
HMGB2-205ENST00000511316 UBTFL1P0CB47 393 aaPredicted RBP15.27■□□□□ 0.04
HMGB2-205ENST00000511316 CNTROBQ8N137 903 aa15.27■□□□□ 0.04
HMGB2-205ENST00000511316 SSH3Q8TE77 659 aa15.27■□□□□ 0.04
HMGB2-205ENST00000511316 NSFL1CQ9UNZ2 370 aaKnown RBP15.27■□□□□ 0.04
HMGB2-205ENST00000511316 MYH3P11055 1940 aa15.27■□□□□ 0.04
HMGB2-205ENST00000511316 APBB1O00213 710 aa15.27■□□□□ 0.03
HMGB2-205ENST00000511316 KIF3CO14782 793 aa15.27■□□□□ 0.03
HMGB2-205ENST00000511316 DPP8Q6V1X1 898 aaPredicted RBP15.27■□□□□ 0.03
HMGB2-205ENST00000511316 ANKRD18AQ8IVF6 992 aa15.27■□□□□ 0.03
HMGB2-205ENST00000511316 ZNF526Q8TF50 670 aaPredicted RBP15.27■□□□□ 0.03
HMGB2-205ENST00000511316 BICC1Q9H694 974 aaKnown RBP15.27■□□□□ 0.03
HMGB2-205ENST00000511316 TTC41PQ6P2S7 1318 aa15.26■□□□□ 0.03
HMGB2-205ENST00000511316 UQCRHLA0A096LP55 91 aa15.26■□□□□ 0.03
HMGB2-205ENST00000511316 UQCRHP07919 91 aa15.26■□□□□ 0.03
HMGB2-205ENST00000511316 TBC1D16Q8TBP0 767 aa15.26■□□□□ 0.03
HMGB2-205ENST00000511316 KIF1BPQ96EK5 621 aa15.26■□□□□ 0.03
HMGB2-205ENST00000511316 VPS33BQ9H267 617 aa15.26■□□□□ 0.03
HMGB2-205ENST00000511316 NMRK2Q9NPI5 230 aa15.26■□□□□ 0.03
HMGB2-205ENST00000511316 SH2B1Q9NRF2 756 aaPredicted RBP15.26■□□□□ 0.03
HMGB2-205ENST00000511316 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.26■□□□□ 0.03
HMGB2-205ENST00000511316 RBM27Q9P2N5 1060 aaKnown RBP15.26■□□□□ 0.03
HMGB2-205ENST00000511316 AOC3Q16853 763 aa15.25■□□□□ 0.03
HMGB2-205ENST00000511316 RILPL2Q969X0 211 aa15.25■□□□□ 0.03
HMGB2-205ENST00000511316 LIMCH1Q9UPQ0 1083 aa15.25■□□□□ 0.03
HMGB2-205ENST00000511316 EXOC6BQ9Y2D4 811 aa15.25■□□□□ 0.03
HMGB2-205ENST00000511316 GOLGA6L6A8MZA4 724 aa15.24■□□□□ 0.03
HMGB2-205ENST00000511316 DDNO94850 711 aaPredicted RBP15.24■□□□□ 0.03
HMGB2-205ENST00000511316 GPATCH3Q96I76 525 aa15.24■□□□□ 0.03
HMGB2-205ENST00000511316 ZNF594Q96JF6 807 aaPredicted RBP15.24■□□□□ 0.03
HMGB2-205ENST00000511316 CDC5LQ99459 802 aaKnown RBP15.24■□□□□ 0.03
HMGB2-205ENST00000511316 TM6SF1Q9BZW5 370 aa15.24■□□□□ 0.03
HMGB2-205ENST00000511316 CEP350Q5VT06 3117 aa15.24■□□□□ 0.03
HMGB2-205ENST00000511316 ZNF541Q9H0D2 1346 aa15.24■□□□□ 0.03
HMGB2-205ENST00000511316 ZSCAN22P10073 491 aaPredicted RBP15.24■□□□□ 0.03
HMGB2-205ENST00000511316 PIBF1Q8WXW3 757 aa15.24■□□□□ 0.03
HMGB2-205ENST00000511316 GPR101Q96P66 508 aaPredicted RBP15.24■□□□□ 0.03
HMGB2-205ENST00000511316 GPBP1L1Q9HC44 474 aaPredicted RBP15.24■□□□□ 0.03
HMGB2-205ENST00000511316 RPAP1Q9BWH6 1393 aaPredicted RBP15.24■□□□□ 0.03
HMGB2-205ENST00000511316 YDJCA8MPS7 323 aa15.23■□□□□ 0.03
HMGB2-205ENST00000511316 HIP1O00291 1037 aa15.23■□□□□ 0.03
HMGB2-205ENST00000511316 SGSM2O43147 1006 aa15.23■□□□□ 0.03
HMGB2-205ENST00000511316 RFX5P48382 616 aaPredicted RBP15.23■□□□□ 0.03
HMGB2-205ENST00000511316 POLA2Q14181 598 aa15.23■□□□□ 0.03
HMGB2-205ENST00000511316 USP25Q9UHP3 1055 aa15.23■□□□□ 0.03
HMGB2-205ENST00000511316 SNAP23O00161 211 aa15.22■□□□□ 0.03
HMGB2-205ENST00000511316 GLRX3O76003 335 aaKnown RBP15.22■□□□□ 0.03
HMGB2-205ENST00000511316 IFIT5Q13325 482 aaKnown RBP15.22■□□□□ 0.03
HMGB2-205ENST00000511316 TXNRD3Q86VQ6 643 aa15.22■□□□□ 0.03
HMGB2-205ENST00000511316 ERC1Q8IUD2 1116 aa15.22■□□□□ 0.03
HMGB2-205ENST00000511316 PKNOX2Q96KN3 472 aa15.22■□□□□ 0.03
HMGB2-205ENST00000511316 PUS3Q9BZE2 481 aaKnown RBP15.22■□□□□ 0.03
HMGB2-205ENST00000511316 RRAGCQ9HB90 399 aa15.22■□□□□ 0.03
HMGB2-205ENST00000511316 KCNQ5Q9NR82 932 aa15.22■□□□□ 0.03
HMGB2-205ENST00000511316 IRS2Q9Y4H2 1338 aa15.22■□□□□ 0.03
HMGB2-205ENST00000511316 ANKRD18BA2A2Z9 1011 aa15.22■□□□□ 0.03
HMGB2-205ENST00000511316 PPIP5K2O43314 1243 aa15.22■□□□□ 0.03
HMGB2-205ENST00000511316 GTF2F1P35269 517 aaKnown RBP eCLIP15.22■□□□□ 0.038e-7■■□□□ 14.4
HMGB2-205ENST00000511316 USP48Q86UV5 1035 aa15.22■□□□□ 0.03
HMGB2-205ENST00000511316 LARGE2Q8N3Y3 721 aa15.22■□□□□ 0.03
HMGB2-205ENST00000511316 MYRIPQ8NFW9 859 aa15.22■□□□□ 0.03
HMGB2-205ENST00000511316 RIPOR2Q9Y4F9 1068 aa15.22■□□□□ 0.03
HMGB2-205ENST00000511316 CCDC171Q6TFL3 1326 aa15.21■□□□□ 0.03
HMGB2-205ENST00000511316 TIAM2Q8IVF5 1701 aa15.21■□□□□ 0.03
HMGB2-205ENST00000511316 STX6O43752 255 aa15.21■□□□□ 0.03
HMGB2-205ENST00000511316 PDCP20941 246 aa15.21■□□□□ 0.03
HMGB2-205ENST00000511316 WASHC4Q2M389 1173 aa15.21■□□□□ 0.03
HMGB2-205ENST00000511316 SUPT20HQ8NEM7 779 aa15.21■□□□□ 0.03
HMGB2-205ENST00000511316 SMC3Q9UQE7 1217 aa15.21■□□□□ 0.03
HMGB2-205ENST00000511316 CHRNDQ07001 517 aa15.2■□□□□ 0.02
HMGB2-205ENST00000511316 CXCL9Q07325 125 aa15.2■□□□□ 0.02
HMGB2-205ENST00000511316 CCDC57Q2TAC2 916 aa15.2■□□□□ 0.02
HMGB2-205ENST00000511316 VPS53Q5VIR6 699 aa15.2■□□□□ 0.02
HMGB2-205ENST00000511316 KLHDC4Q8TBB5 520 aa15.2■□□□□ 0.02
HMGB2-205ENST00000511316 L3MBTL3Q96JM7 780 aaPredicted RBP15.2■□□□□ 0.02
HMGB2-205ENST00000511316 ZMYND15Q9H091 742 aa15.2■□□□□ 0.02
HMGB2-205ENST00000511316 TMX4Q9H1E5 349 aaPredicted RBP15.2■□□□□ 0.02
HMGB2-205ENST00000511316 ANKIB1Q9P2G1 1089 aa15.2■□□□□ 0.02
HMGB2-205ENST00000511316 LRRFIP2Q9Y608 721 aaKnown RBP15.2■□□□□ 0.02
HMGB2-205ENST00000511316 XDHP47989 1333 aa15.2■□□□□ 0.02
HMGB2-205ENST00000511316 PNMA6EA0A0J9YXQ4 647 aa15.2■□□□□ 0.02
HMGB2-205ENST00000511316 C6orf229H3BNL8 230 aa15.2■□□□□ 0.02
HMGB2-205ENST00000511316 KLRK1P26718 216 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms