RNA–Protein interactions for RNA: ENST00000511023.1

COL12A1-210, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-210ENST00000511023 WNT10BO00744 389 aa18.15■□□□□ 0.5
COL12A1-210ENST00000511023 RLBP1P12271 317 aa18.15■□□□□ 0.5
COL12A1-210ENST00000511023 FKBP1AP62942 108 aaKnown RBP18.15■□□□□ 0.5
COL12A1-210ENST00000511023 MTX1Q13505 466 aa18.15■□□□□ 0.5
COL12A1-210ENST00000511023 COPRSQ9NQ92 184 aa18.15■□□□□ 0.5
COL12A1-210ENST00000511023 SCAF8Q9UPN6 1271 aaKnown RBP18.15■□□□□ 0.5
COL12A1-210ENST00000511023 CIAO1O76071 339 aa18.14■□□□□ 0.49
COL12A1-210ENST00000511023 PUM3Q15397 648 aaKnown RBP18.14■□□□□ 0.49
COL12A1-210ENST00000511023 SAPCD2Q86UD0 394 aa18.14■□□□□ 0.49
COL12A1-210ENST00000511023 SULF1Q8IWU6 871 aa18.14■□□□□ 0.49
COL12A1-210ENST00000511023 FBXO3Q9UK99 471 aa18.14■□□□□ 0.49
COL12A1-210ENST00000511023 IQSEC3Q9UPP2 1182 aaPredicted RBP18.14■□□□□ 0.49
COL12A1-210ENST00000511023 PCDHAC2Q9Y5I4 1007 aa18.14■□□□□ 0.49
COL12A1-210ENST00000511023 F8W031 263 aaPredicted RBP18.13■□□□□ 0.49
COL12A1-210ENST00000511023 MMP14P50281 582 aa18.13■□□□□ 0.49
COL12A1-210ENST00000511023 BCAMP50895 628 aa18.13■□□□□ 0.49
COL12A1-210ENST00000511023 PITPNM2Q9BZ72 1349 aa18.13■□□□□ 0.49
COL12A1-210ENST00000511023 SRGAP3O43295 1099 aa18.12■□□□□ 0.49
COL12A1-210ENST00000511023 GNAI2P04899 355 aa18.12■□□□□ 0.49
COL12A1-210ENST00000511023 CYP4F22Q6NT55 531 aa18.12■□□□□ 0.49
COL12A1-210ENST00000511023 DZIP1LQ8IYY4 767 aaKnown RBP18.12■□□□□ 0.49
COL12A1-210ENST00000511023 CDCA5Q96FF9 252 aa18.12■□□□□ 0.49
COL12A1-210ENST00000511023 HDAC9Q9UKV0 1011 aa18.12■□□□□ 0.49
COL12A1-210ENST00000511023 WDR33Q9C0J8 1336 aaKnown RBP18.12■□□□□ 0.49
COL12A1-210ENST00000511023 IFIT1P09914 478 aaKnown RBP18.11■□□□□ 0.49
COL12A1-210ENST00000511023 HSPA1AP0DMV8 641 aaKnown RBP18.11■□□□□ 0.49
COL12A1-210ENST00000511023 HSPA1BP0DMV9 641 aaKnown RBP18.11■□□□□ 0.49
COL12A1-210ENST00000511023 IL15P40933 162 aaPredicted RBP18.11■□□□□ 0.49
COL12A1-210ENST00000511023 GRIK5Q16478 980 aa18.11■□□□□ 0.49
COL12A1-210ENST00000511023 CAVIN4Q5BKX8 364 aa18.11■□□□□ 0.49
COL12A1-210ENST00000511023 MFSD14BQ5SR56 506 aa18.11■□□□□ 0.49
COL12A1-210ENST00000511023 VPS37DQ86XT2 251 aa18.11■□□□□ 0.49
COL12A1-210ENST00000511023 LPIN2Q92539 896 aa18.11■□□□□ 0.49
COL12A1-210ENST00000511023 CAPNS2Q96L46 248 aa18.11■□□□□ 0.49
COL12A1-210ENST00000511023 AOX1Q06278 1338 aa18.11■□□□□ 0.49
COL12A1-210ENST00000511023 ARAP2Q8WZ64 1704 aa18.1■□□□□ 0.49
COL12A1-210ENST00000511023 PNMA6EA0A0J9YXQ4 647 aa18.1■□□□□ 0.49
COL12A1-210ENST00000511023 SLC5A1P13866 664 aa18.1■□□□□ 0.49
COL12A1-210ENST00000511023 FTSJ3Q8IY81 847 aaKnown RBP18.1■□□□□ 0.49
COL12A1-210ENST00000511023 MTMR14Q8NCE2 650 aa18.1■□□□□ 0.49
COL12A1-210ENST00000511023 CEP126Q9P2H0 1117 aa18.1■□□□□ 0.49
COL12A1-210ENST00000511023 THSD7BQ9C0I4 1608 aa18.09■□□□□ 0.49
COL12A1-210ENST00000511023 CHAF1AQ13111 956 aaPredicted RBP18.09■□□□□ 0.49
COL12A1-210ENST00000511023 DLGAP5Q15398 846 aa18.09■□□□□ 0.49
COL12A1-210ENST00000511023 ATP2B3Q16720 1220 aa18.09■□□□□ 0.49
COL12A1-210ENST00000511023 CFAP100Q494V2 611 aa18.09■□□□□ 0.49
COL12A1-210ENST00000511023 PRAMEF18Q5VWM3 479 aa18.09■□□□□ 0.49
COL12A1-210ENST00000511023 PANK1Q8TE04 598 aa18.09■□□□□ 0.49
COL12A1-210ENST00000511023 GBA2Q9HCG7 927 aaPredicted RBP18.09■□□□□ 0.49
COL12A1-210ENST00000511023 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.09■□□□□ 0.49
COL12A1-210ENST00000511023 ZBTB7BO15156 539 aaPredicted RBP18.08■□□□□ 0.48
COL12A1-210ENST00000511023 HUNKP57058 714 aa18.08■□□□□ 0.48
COL12A1-210ENST00000511023 PAXIP1Q6ZW49 1069 aaPredicted RBP18.08■□□□□ 0.48
COL12A1-210ENST00000511023 ITPRIPQ8IWB1 547 aa18.08■□□□□ 0.48
COL12A1-210ENST00000511023 HHIPL1Q96JK4 782 aa18.08■□□□□ 0.48
COL12A1-210ENST00000511023 PRMT6Q96LA8 375 aaPredicted RBP18.08■□□□□ 0.48
COL12A1-210ENST00000511023 C1orf115Q9H7X2 142 aa18.08■□□□□ 0.48
COL12A1-210ENST00000511023 COL1A1P02452 1464 aaPredicted RBP18.07■□□□□ 0.48
COL12A1-210ENST00000511023 SPDYE2BA6NHP3 402 aa18.07■□□□□ 0.48
COL12A1-210ENST00000511023 AOC2O75106 756 aa18.07■□□□□ 0.48
COL12A1-210ENST00000511023 SPDYE6P0CI01 402 aa18.07■□□□□ 0.48
COL12A1-210ENST00000511023 ADORA1P30542 326 aa18.07■□□□□ 0.48
COL12A1-210ENST00000511023 GRM1Q13255 1194 aa18.07■□□□□ 0.48
COL12A1-210ENST00000511023 TTF2Q9UNY4 1162 aaKnown RBP18.07■□□□□ 0.48
COL12A1-210ENST00000511023 FRAT2O75474 233 aaPredicted RBP18.06■□□□□ 0.48
COL12A1-210ENST00000511023 ECE1P42892 770 aa18.06■□□□□ 0.48
COL12A1-210ENST00000511023 TFCP2Q12800 502 aa18.06■□□□□ 0.48
COL12A1-210ENST00000511023 C2orf69Q8N8R5 385 aa18.06■□□□□ 0.48
COL12A1-210ENST00000511023 ECM29Q5VYK3 1845 aa18.05■□□□□ 0.48
COL12A1-210ENST00000511023 CLRN2A0PK11 232 aa18.05■□□□□ 0.48
COL12A1-210ENST00000511023 PHKA1P46020 1223 aa18.05■□□□□ 0.48
COL12A1-210ENST00000511023 TIMM10P62072 90 aa18.05■□□□□ 0.48
COL12A1-210ENST00000511023 POLA2Q14181 598 aa18.05■□□□□ 0.48
COL12A1-210ENST00000511023 APOBEC3FQ8IUX4 373 aaKnown RBP18.05■□□□□ 0.48
COL12A1-210ENST00000511023 TBC1D22AQ8WUA7 517 aa18.05■□□□□ 0.48
COL12A1-210ENST00000511023 WBP1LQ9NX94 342 aa18.05■□□□□ 0.48
COL12A1-210ENST00000511023 SERPINA10Q9UK55 444 aa18.05■□□□□ 0.48
COL12A1-210ENST00000511023 FOXN1O15353 648 aa18.04■□□□□ 0.48
COL12A1-210ENST00000511023 ATP8B2P98198 1209 aa18.04■□□□□ 0.48
COL12A1-210ENST00000511023 MOB2Q70IA6 237 aa18.04■□□□□ 0.48
COL12A1-210ENST00000511023 SSH3Q8TE77 659 aa18.04■□□□□ 0.48
COL12A1-210ENST00000511023 RCAN3Q9UKA8 241 aa18.04■□□□□ 0.48
COL12A1-210ENST00000511023 FAM155AB1AL88 458 aaPredicted RBP18.03■□□□□ 0.48
COL12A1-210ENST00000511023 CRKP46108 304 aa18.03■□□□□ 0.48
COL12A1-210ENST00000511023 RBM5P52756 815 aaKnown RBP eCLIP18.03■□□□□ 0.48
COL12A1-210ENST00000511023 ZIC5Q96T25 663 aa18.03■□□□□ 0.48
COL12A1-210ENST00000511023 PAPPA2Q9BXP8 1791 aa18.03■□□□□ 0.48
COL12A1-210ENST00000511023 MYH13Q9UKX3 1938 aa18.03■□□□□ 0.48
COL12A1-210ENST00000511023 A0A1B0GUL7 405 aa18.02■□□□□ 0.48
COL12A1-210ENST00000511023 CCDC102BQ68D86 513 aa18.02■□□□□ 0.48
COL12A1-210ENST00000511023 RGMBQ6NW40 437 aa18.02■□□□□ 0.48
COL12A1-210ENST00000511023 DEFB129Q9H1M3 183 aa18.02■□□□□ 0.48
COL12A1-210ENST00000511023 MAP2K2P36507 400 aa18.01■□□□□ 0.47
COL12A1-210ENST00000511023 FKBP1BP68106 108 aa18.01■□□□□ 0.47
COL12A1-210ENST00000511023 HDLBPQ00341 1268 aaKnown RBP18.01■□□□□ 0.47
COL12A1-210ENST00000511023 SPDYE2Q495Y8 402 aa18.01■□□□□ 0.47
COL12A1-210ENST00000511023 COL13A1Q5TAT6 717 aaPredicted RBP18.01■□□□□ 0.47
COL12A1-210ENST00000511023 WDR66Q8TBY9 1149 aa18.01■□□□□ 0.47
COL12A1-210ENST00000511023 XAGE2Q96GT9 111 aa18.01■□□□□ 0.47
COL12A1-210ENST00000511023 TDRD3Q9H7E2 651 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms