RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 IFIT2P09913 472 aaKnown RBP12.78□□□□□ -0.36
NR1I3-227ENST00000510951 GMPSP49915 693 aaPredicted RBP12.78□□□□□ -0.36
NR1I3-227ENST00000510951 TNIP1Q15025 636 aa12.78□□□□□ -0.36
NR1I3-227ENST00000510951 TTC39AQ5SRH9 613 aa12.78□□□□□ -0.36
NR1I3-227ENST00000510951 TTLL5Q6EMB2 1281 aa12.78□□□□□ -0.36
NR1I3-227ENST00000510951 B4GALNT3Q6L9W6 998 aa12.78□□□□□ -0.36
NR1I3-227ENST00000510951 MAST2Q6P0Q8 1798 aa12.78□□□□□ -0.36
NR1I3-227ENST00000510951 MYH7P12883 1935 aa12.78□□□□□ -0.36
NR1I3-227ENST00000510951 ECM29Q5VYK3 1845 aa12.77□□□□□ -0.37
NR1I3-227ENST00000510951 DOCK2Q92608 1830 aa12.77□□□□□ -0.37
NR1I3-227ENST00000510951 RASGRF1Q13972 1273 aa12.77□□□□□ -0.37
NR1I3-227ENST00000510951 DACT2Q5SW24 774 aa12.77□□□□□ -0.37
NR1I3-227ENST00000510951 ANKRD45Q5TZF3 282 aa12.77□□□□□ -0.37
NR1I3-227ENST00000510951 RSBN1LQ6PCB5 846 aaPredicted RBP12.77□□□□□ -0.37
NR1I3-227ENST00000510951 GCC1Q96CN9 775 aa12.77□□□□□ -0.37
NR1I3-227ENST00000510951 NMRK2Q9NPI5 230 aa12.77□□□□□ -0.37
NR1I3-227ENST00000510951 GNL3LQ9NVN8 582 aaKnown RBP12.77□□□□□ -0.37
NR1I3-227ENST00000510951 ZBTB47Q9UFB7 747 aaPredicted RBP12.77□□□□□ -0.37
NR1I3-227ENST00000510951 MYH2Q9UKX2 1941 aa12.77□□□□□ -0.37
NR1I3-227ENST00000510951 AK9Q5TCS8 1911 aa12.76□□□□□ -0.37
NR1I3-227ENST00000510951 SHTN1A0MZ66 631 aa12.76□□□□□ -0.37
NR1I3-227ENST00000510951 VIL1P09327 827 aaKnown RBP12.76□□□□□ -0.37
NR1I3-227ENST00000510951 SCNN1DP51172 638 aa12.76□□□□□ -0.37
NR1I3-227ENST00000510951 SCARF1Q14162 830 aa12.76□□□□□ -0.37
NR1I3-227ENST00000510951 CCDC158Q5M9N0 1113 aa12.76□□□□□ -0.37
NR1I3-227ENST00000510951 STRIP1Q5VSL9 837 aa12.76□□□□□ -0.37
NR1I3-227ENST00000510951 PI16Q6UXB8 463 aa12.76□□□□□ -0.37
NR1I3-227ENST00000510951 SMC5Q8IY18 1101 aa12.76□□□□□ -0.37
NR1I3-227ENST00000510951 CERS5Q8N5B7 392 aa12.76□□□□□ -0.37
NR1I3-227ENST00000510951 GPBP1L1Q9HC44 474 aaPredicted RBP12.76□□□□□ -0.37
NR1I3-227ENST00000510951 F8W031 263 aaPredicted RBP12.75□□□□□ -0.37
NR1I3-227ENST00000510951 ARID4AP29374 1257 aaPredicted RBP12.75□□□□□ -0.37
NR1I3-227ENST00000510951 LMOD1P29536 600 aaPredicted RBP12.75□□□□□ -0.37
NR1I3-227ENST00000510951 MCAMP43121 646 aa12.75□□□□□ -0.37
NR1I3-227ENST00000510951 MFSD14BQ5SR56 506 aa12.75□□□□□ -0.37
NR1I3-227ENST00000510951 TSHZ3Q63HK5 1081 aa12.75□□□□□ -0.37
NR1I3-227ENST00000510951 FAM205AQ6ZU69 1335 aa12.75□□□□□ -0.37
NR1I3-227ENST00000510951 ZNF784Q8NCA9 323 aaPredicted RBP12.75□□□□□ -0.37
NR1I3-227ENST00000510951 OTUD7AQ8TE49 926 aaPredicted RBP12.75□□□□□ -0.37
NR1I3-227ENST00000510951 L3MBTL3Q96JM7 780 aaPredicted RBP12.75□□□□□ -0.37
NR1I3-227ENST00000510951 LNPKQ9C0E8 428 aa12.75□□□□□ -0.37
NR1I3-227ENST00000510951 RRAGCQ9HB90 399 aa12.75□□□□□ -0.37
NR1I3-227ENST00000510951 SNRKQ9NRH2 765 aa12.75□□□□□ -0.37
NR1I3-227ENST00000510951 POLR2AP24928 1970 aaKnown RBP12.74□□□□□ -0.37
NR1I3-227ENST00000510951 SEMA3EO15041 775 aa12.74□□□□□ -0.37
NR1I3-227ENST00000510951 UQCRFS1P1P0C7P4 283 aa12.74□□□□□ -0.37
NR1I3-227ENST00000510951 EPS15P42566 896 aa12.74□□□□□ -0.37
NR1I3-227ENST00000510951 KIAA0825Q8IV33 1275 aa12.74□□□□□ -0.37
NR1I3-227ENST00000510951 MICALL2Q8IY33 904 aa12.74□□□□□ -0.37
NR1I3-227ENST00000510951 C16orf71Q8IYS4 520 aaPredicted RBP12.74□□□□□ -0.37
NR1I3-227ENST00000510951 GPRC5DQ9NZD1 345 aa12.74□□□□□ -0.37
NR1I3-227ENST00000510951 HMG20BQ9P0W2 317 aa12.74□□□□□ -0.37
NR1I3-227ENST00000510951 DENND2AQ9ULE3 1009 aa12.74□□□□□ -0.37
NR1I3-227ENST00000510951 NDUFB9Q9Y6M9 179 aa12.74□□□□□ -0.37
NR1I3-227ENST00000510951 MYO3BQ8WXR4 1341 aa12.73□□□□□ -0.37
NR1I3-227ENST00000510951 NPM3O75607 178 aaKnown RBP12.73□□□□□ -0.37
NR1I3-227ENST00000510951 RPS12P25398 132 aaKnown RBP12.73□□□□□ -0.37
NR1I3-227ENST00000510951 GRIK5Q16478 980 aa12.73□□□□□ -0.37
NR1I3-227ENST00000510951 SPATA5Q8NB90 893 aa12.73□□□□□ -0.37
NR1I3-227ENST00000510951 AGBL3Q8NEM8 1001 aa12.73□□□□□ -0.37
NR1I3-227ENST00000510951 CCDC136Q96JN2 1154 aa12.73□□□□□ -0.37
NR1I3-227ENST00000510951 HACL1Q9UJ83 578 aa12.73□□□□□ -0.37
NR1I3-227ENST00000510951 IQCA1LA6NCM1 817 aa12.72□□□□□ -0.37
NR1I3-227ENST00000510951 POTECB2RU33 542 aa12.72□□□□□ -0.37
NR1I3-227ENST00000510951 EPHX2P34913 555 aa12.72□□□□□ -0.37
NR1I3-227ENST00000510951 ZAP70P43403 619 aa12.72□□□□□ -0.37
NR1I3-227ENST00000510951 NUCB1Q02818 461 aa12.72□□□□□ -0.37
NR1I3-227ENST00000510951 WDR66Q8TBY9 1149 aa12.72□□□□□ -0.37
NR1I3-227ENST00000510951 TBC1D22AQ8WUA7 517 aa12.72□□□□□ -0.37
NR1I3-227ENST00000510951 GPATCH3Q96I76 525 aa12.72□□□□□ -0.37
NR1I3-227ENST00000510951 GMLQ99445 158 aa12.72□□□□□ -0.37
NR1I3-227ENST00000510951 DNAJC2Q99543 621 aaKnown RBP12.72□□□□□ -0.37
NR1I3-227ENST00000510951 ABCF2Q9UG63 623 aa12.72□□□□□ -0.37
NR1I3-227ENST00000510951 CNOT7Q9UIV1 285 aaKnown RBP12.72□□□□□ -0.37
NR1I3-227ENST00000510951 PDS5AQ29RF7 1337 aaKnown RBP12.71□□□□□ -0.37
NR1I3-227ENST00000510951 EGFRP00533 1210 aa12.71□□□□□ -0.37
NR1I3-227ENST00000510951 USP17L8P0C7I0 530 aa12.71□□□□□ -0.37
NR1I3-227ENST00000510951 MX1P20591 662 aa12.71□□□□□ -0.37
NR1I3-227ENST00000510951 PRDX5P30044 214 aa12.71□□□□□ -0.37
NR1I3-227ENST00000510951 FKBP1AP62942 108 aaKnown RBP12.71□□□□□ -0.37
NR1I3-227ENST00000510951 TBC1D10BQ4KMP7 808 aaPredicted RBP12.71□□□□□ -0.37
NR1I3-227ENST00000510951 EAPPQ56P03 285 aaPredicted RBP12.71□□□□□ -0.37
NR1I3-227ENST00000510951 RBM26Q5T8P6 1007 aaKnown RBP12.71□□□□□ -0.37
NR1I3-227ENST00000510951 TBC1D9Q6ZT07 1266 aa12.71□□□□□ -0.37
NR1I3-227ENST00000510951 SAMD7Q7Z3H4 446 aa12.71□□□□□ -0.37
NR1I3-227ENST00000510951 CHD1LQ86WJ1 897 aa12.71□□□□□ -0.37
NR1I3-227ENST00000510951 TRPM4Q8TD43 1214 aa12.71□□□□□ -0.37
NR1I3-227ENST00000510951 DPF2Q92785 391 aa12.71□□□□□ -0.37
NR1I3-227ENST00000510951 BOLA2Q9H3K6 86 aa12.71□□□□□ -0.37
NR1I3-227ENST00000510951 TAF1DQ9H5J8 278 aaPredicted RBP12.71□□□□□ -0.37
NR1I3-227ENST00000510951 TTF2Q9UNY4 1162 aaKnown RBP12.71□□□□□ -0.37
NR1I3-227ENST00000510951 SALL1Q9NSC2 1324 aa12.7□□□□□ -0.38
NR1I3-227ENST00000510951 H7C1D1 291 aa12.7□□□□□ -0.38
NR1I3-227ENST00000510951 VEGFAP15692 232 aaPredicted RBP12.7□□□□□ -0.38
NR1I3-227ENST00000510951 KIF4BQ2VIQ3 1234 aa12.7□□□□□ -0.38
NR1I3-227ENST00000510951 ZNF512BQ96KM6 892 aaPredicted RBP12.7□□□□□ -0.38
NR1I3-227ENST00000510951 ECHDC1Q9NTX5 307 aa12.7□□□□□ -0.38
NR1I3-227ENST00000510951 HDAC9Q9UKV0 1011 aa12.7□□□□□ -0.38
NR1I3-227ENST00000510951 PCDHAC2Q9Y5I4 1007 aa12.7□□□□□ -0.38
NR1I3-227ENST00000510951 CDK5RAP2Q96SN8 1893 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms