RNA–Protein interactions for RNA: ENST00000510331.1

LSM6-206, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-206ENST00000510331 EYA2O00167 538 aa23.2■■□□□ 1.3
LSM6-206ENST00000510331 WNT10BO00744 389 aa23.2■■□□□ 1.3
LSM6-206ENST00000510331 PDE8BO95263 885 aa23.2■■□□□ 1.3
LSM6-206ENST00000510331 CDCA5Q96FF9 252 aa23.2■■□□□ 1.3
LSM6-206ENST00000510331 SIL1Q9H173 461 aa23.2■■□□□ 1.3
LSM6-206ENST00000510331 PAPPA2Q9BXP8 1791 aa23.19■■□□□ 1.3
LSM6-206ENST00000510331 F8W031 263 aaPredicted RBP23.19■■□□□ 1.3
LSM6-206ENST00000510331 HIBADHP31937 336 aaKnown RBP23.19■■□□□ 1.3
LSM6-206ENST00000510331 ATG9AQ7Z3C6 839 aa23.19■■□□□ 1.3
LSM6-206ENST00000510331 TDRD7Q8NHU6 1098 aaKnown RBP23.19■■□□□ 1.3
LSM6-206ENST00000510331 FAM205AQ6ZU69 1335 aa23.18■■□□□ 1.3
LSM6-206ENST00000510331 PUM3Q15397 648 aaKnown RBP23.18■■□□□ 1.3
LSM6-206ENST00000510331 ZKSCAN2Q63HK3 967 aa23.18■■□□□ 1.3
LSM6-206ENST00000510331 HDAC9Q9UKV0 1011 aa23.18■■□□□ 1.3
LSM6-206ENST00000510331 IQSEC3Q9UPP2 1182 aaPredicted RBP23.18■■□□□ 1.3
LSM6-206ENST00000510331 PA2G4Q9UQ80 394 aaKnown RBP23.18■■□□□ 1.3
LSM6-206ENST00000510331 FGFR2P21802 821 aa23.17■■□□□ 1.3
LSM6-206ENST00000510331 ZBED3Q96IU2 234 aaPredicted RBP23.17■■□□□ 1.3
LSM6-206ENST00000510331 GBA2Q9HCG7 927 aaPredicted RBP23.17■■□□□ 1.3
LSM6-206ENST00000510331 PCDHAC2Q9Y5I4 1007 aa23.17■■□□□ 1.3
LSM6-206ENST00000510331 COL1A1P02452 1464 aaPredicted RBP23.17■■□□□ 1.3
LSM6-206ENST00000510331 GNAI3P08754 354 aa23.16■■□□□ 1.3
LSM6-206ENST00000510331 FKBP1AP62942 108 aaKnown RBP23.16■■□□□ 1.3
LSM6-206ENST00000510331 TMEM57Q8N5G2 664 aa23.16■■□□□ 1.3
LSM6-206ENST00000510331 CIAO1O76071 339 aa23.15■■□□□ 1.3
LSM6-206ENST00000510331 ECE1P42892 770 aa23.15■■□□□ 1.3
LSM6-206ENST00000510331 HUNKP57058 714 aa23.15■■□□□ 1.3
LSM6-206ENST00000510331 MFSD14BQ5SR56 506 aa23.15■■□□□ 1.3
LSM6-206ENST00000510331 FBXO33Q7Z6M2 555 aa23.15■■□□□ 1.3
LSM6-206ENST00000510331 VPS37DQ86XT2 251 aa23.15■■□□□ 1.3
LSM6-206ENST00000510331 HDAC5Q9UQL6 1122 aa23.15■■□□□ 1.3
LSM6-206ENST00000510331 AOX1Q06278 1338 aa23.14■■□□□ 1.3
LSM6-206ENST00000510331 AOC2O75106 756 aa23.14■■□□□ 1.29
LSM6-206ENST00000510331 MMP14P50281 582 aa23.14■■□□□ 1.29
LSM6-206ENST00000510331 BCAMP50895 628 aa23.14■■□□□ 1.29
LSM6-206ENST00000510331 CAVIN4Q5BKX8 364 aa23.14■■□□□ 1.29
LSM6-206ENST00000510331 HHIPL1Q96JK4 782 aa23.14■■□□□ 1.29
LSM6-206ENST00000510331 FOXN1O15353 648 aa23.13■■□□□ 1.29
LSM6-206ENST00000510331 IFIT1P09914 478 aaKnown RBP23.13■■□□□ 1.29
LSM6-206ENST00000510331 CHAF1AQ13111 956 aaPredicted RBP23.13■■□□□ 1.29
LSM6-206ENST00000510331 DLGAP5Q15398 846 aa23.13■■□□□ 1.29
LSM6-206ENST00000510331 PRAMEF18Q5VWM3 479 aa23.13■■□□□ 1.29
LSM6-206ENST00000510331 SRGAP3O43295 1099 aa23.12■■□□□ 1.29
LSM6-206ENST00000510331 RLBP1P12271 317 aa23.12■■□□□ 1.29
LSM6-206ENST00000510331 SLC5A1P13866 664 aa23.12■■□□□ 1.29
LSM6-206ENST00000510331 MTX1Q13505 466 aa23.12■■□□□ 1.29
LSM6-206ENST00000510331 CFAP100Q494V2 611 aa23.12■■□□□ 1.29
LSM6-206ENST00000510331 C2orf69Q8N8R5 385 aa23.12■■□□□ 1.29
LSM6-206ENST00000510331 COPRSQ9NQ92 184 aa23.12■■□□□ 1.29
LSM6-206ENST00000510331 WBP1LQ9NX94 342 aa23.12■■□□□ 1.29
LSM6-206ENST00000510331 FBXO3Q9UK99 471 aa23.12■■□□□ 1.29
LSM6-206ENST00000510331 SPDYE2BA6NHP3 402 aa23.11■■□□□ 1.29
LSM6-206ENST00000510331 SPDYE6P0CI01 402 aa23.11■■□□□ 1.29
LSM6-206ENST00000510331 GRIK5Q16478 980 aa23.11■■□□□ 1.29
LSM6-206ENST00000510331 ATP2B3Q16720 1220 aa23.11■■□□□ 1.29
LSM6-206ENST00000510331 COL13A1Q5TAT6 717 aaPredicted RBP23.11■■□□□ 1.29
LSM6-206ENST00000510331 APOBEC3FQ8IUX4 373 aaKnown RBP23.11■■□□□ 1.29
LSM6-206ENST00000510331 FTSJ3Q8IY81 847 aaKnown RBP23.11■■□□□ 1.29
LSM6-206ENST00000510331 MTMR14Q8NCE2 650 aa23.11■■□□□ 1.29
LSM6-206ENST00000510331 LPIN2Q92539 896 aa23.11■■□□□ 1.29
LSM6-206ENST00000510331 GNAI2P04899 355 aa23.1■■□□□ 1.29
LSM6-206ENST00000510331 IL15P40933 162 aaPredicted RBP23.1■■□□□ 1.29
LSM6-206ENST00000510331 AIDAQ96BJ3 306 aa23.1■■□□□ 1.29
LSM6-206ENST00000510331 TTF2Q9UNY4 1162 aaKnown RBP23.1■■□□□ 1.29
LSM6-206ENST00000510331 SSC5DA1L4H1 1573 aa23.1■■□□□ 1.29
LSM6-206ENST00000510331 CLRN2A0PK11 232 aa23.09■■□□□ 1.29
LSM6-206ENST00000510331 FRAT2O75474 233 aaPredicted RBP23.09■■□□□ 1.29
LSM6-206ENST00000510331 MOB2Q70IA6 237 aa23.09■■□□□ 1.29
LSM6-206ENST00000510331 CEP126Q9P2H0 1117 aa23.09■■□□□ 1.29
LSM6-206ENST00000510331 RBM5P52756 815 aaKnown RBP eCLIP23.08■■□□□ 1.29
LSM6-206ENST00000510331 MAP2K1Q02750 393 aaPredicted RBP23.08■■□□□ 1.29
LSM6-206ENST00000510331 RGMBQ6NW40 437 aa23.08■■□□□ 1.29
LSM6-206ENST00000510331 ITPRIPQ8IWB1 547 aa23.08■■□□□ 1.29
LSM6-206ENST00000510331 DZIP1LQ8IYY4 767 aaKnown RBP23.08■■□□□ 1.29
LSM6-206ENST00000510331 PNMA6EA0A0J9YXQ4 647 aa23.07■■□□□ 1.28
LSM6-206ENST00000510331 PRMT6Q96LA8 375 aaPredicted RBP23.07■■□□□ 1.28
LSM6-206ENST00000510331 ZIC5Q96T25 663 aa23.07■■□□□ 1.28
LSM6-206ENST00000510331 C1orf115Q9H7X2 142 aa23.07■■□□□ 1.28
LSM6-206ENST00000510331 FAM155AB1AL88 458 aaPredicted RBP23.06■■□□□ 1.28
LSM6-206ENST00000510331 ADORA1P30542 326 aa23.06■■□□□ 1.28
LSM6-206ENST00000510331 VEZTQ9HBM0 779 aa23.06■■□□□ 1.28
LSM6-206ENST00000510331 SERPINA10Q9UK55 444 aa23.06■■□□□ 1.28
LSM6-206ENST00000510331 OTOFQ9HC10 1997 aa23.05■■□□□ 1.28
LSM6-206ENST00000510331 MYO1BO43795 1136 aa23.05■■□□□ 1.28
LSM6-206ENST00000510331 MAP2K2P36507 400 aa23.05■■□□□ 1.28
LSM6-206ENST00000510331 ZNF157P51786 506 aaPredicted RBP23.05■■□□□ 1.28
LSM6-206ENST00000510331 FKBP1BP68106 108 aa23.05■■□□□ 1.28
LSM6-206ENST00000510331 TBC1D22AQ8WUA7 517 aa23.05■■□□□ 1.28
LSM6-206ENST00000510331 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.05■■□□□ 1.28
LSM6-206ENST00000510331 SLC10A3P09131 477 aa23.04■■□□□ 1.28
LSM6-206ENST00000510331 PHKA1P46020 1223 aa23.04■■□□□ 1.28
LSM6-206ENST00000510331 CRKP46108 304 aa23.04■■□□□ 1.28
LSM6-206ENST00000510331 CTCFP49711 727 aaPredicted RBP23.04■■□□□ 1.28
LSM6-206ENST00000510331 NOGQ13253 232 aa23.04■■□□□ 1.28
LSM6-206ENST00000510331 DEFB129Q9H1M3 183 aa23.04■■□□□ 1.28
LSM6-206ENST00000510331 HSPA8P11142 646 aaKnown RBP23.03■■□□□ 1.28
LSM6-206ENST00000510331 TFCP2Q12800 502 aa23.03■■□□□ 1.28
LSM6-206ENST00000510331 TTLL12Q14166 644 aaPredicted RBP23.03■■□□□ 1.28
LSM6-206ENST00000510331 SPDYE2Q495Y8 402 aa23.03■■□□□ 1.28
LSM6-206ENST00000510331 RASAL3Q86YV0 1011 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms