RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 IGF2BP3O00425 579 aaKnown RBP eCLIP13.22□□□□□ -0.29
MBD4-208ENST00000509828 WDHD1O75717 1129 aaPredicted RBP13.22□□□□□ -0.29
MBD4-208ENST00000509828 SLC4A2P04920 1241 aa13.22□□□□□ -0.29
MBD4-208ENST00000509828 SP3Q02447 781 aa13.22□□□□□ -0.29
MBD4-208ENST00000509828 CHRNDQ07001 517 aa13.22□□□□□ -0.29
MBD4-208ENST00000509828 HELBQ8NG08 1087 aaPredicted RBP13.22□□□□□ -0.29
MBD4-208ENST00000509828 UNCXA6NJT0 531 aa13.21□□□□□ -0.29
MBD4-208ENST00000509828 PLIN1O60240 522 aa13.21□□□□□ -0.29
MBD4-208ENST00000509828 TAF5LO75529 589 aa13.21□□□□□ -0.29
MBD4-208ENST00000509828 EN2P19622 333 aaPredicted RBP13.21□□□□□ -0.29
MBD4-208ENST00000509828 CRHR2Q13324 411 aa13.21□□□□□ -0.29
MBD4-208ENST00000509828 MAP3K11Q16584 847 aa13.21□□□□□ -0.29
MBD4-208ENST00000509828 SLC4A8Q2Y0W8 1093 aa13.21□□□□□ -0.29
MBD4-208ENST00000509828 TAF7LQ5H9L4 462 aa13.21□□□□□ -0.29
MBD4-208ENST00000509828 NBPF12Q5TAG4 269 aaPredicted RBP13.21□□□□□ -0.29
MBD4-208ENST00000509828 NBPF11Q86T75 865 aa13.21□□□□□ -0.29
MBD4-208ENST00000509828 ANKRD13AQ8IZ07 590 aa13.21□□□□□ -0.29
MBD4-208ENST00000509828 TSPYL6Q8N831 410 aa13.21□□□□□ -0.29
MBD4-208ENST00000509828 ZBED3Q96IU2 234 aaPredicted RBP13.21□□□□□ -0.29
MBD4-208ENST00000509828 IFIT5Q13325 482 aaKnown RBP13.2□□□□□ -0.3
MBD4-208ENST00000509828 GCKRQ14397 625 aa13.2□□□□□ -0.3
MBD4-208ENST00000509828 ELP3Q9H9T3 547 aa13.2□□□□□ -0.3
MBD4-208ENST00000509828 JAG2Q9Y219 1238 aa13.2□□□□□ -0.3
MBD4-208ENST00000509828 COL1A1P02452 1464 aaPredicted RBP13.2□□□□□ -0.3
MBD4-208ENST00000509828 SPDYE2BA6NHP3 402 aa13.19□□□□□ -0.3
MBD4-208ENST00000509828 USP2O75604 605 aaPredicted RBP13.19□□□□□ -0.3
MBD4-208ENST00000509828 MYCP01106 439 aaPredicted RBP13.19□□□□□ -0.3
MBD4-208ENST00000509828 SPDYE6P0CI01 402 aa13.19□□□□□ -0.3
MBD4-208ENST00000509828 FKBP5Q13451 457 aaPredicted RBP13.19□□□□□ -0.3
MBD4-208ENST00000509828 TNFAIP1Q13829 316 aa13.19□□□□□ -0.3
MBD4-208ENST00000509828 RASA3Q14644 834 aa13.19□□□□□ -0.3
MBD4-208ENST00000509828 TWISTNBQ3B726 338 aaPredicted RBP13.19□□□□□ -0.3
MBD4-208ENST00000509828 MTMR14Q8NCE2 650 aa13.19□□□□□ -0.3
MBD4-208ENST00000509828 TSR2Q969E8 191 aaKnown RBP13.19□□□□□ -0.3
MBD4-208ENST00000509828 PRMT6Q96LA8 375 aaPredicted RBP13.19□□□□□ -0.3
MBD4-208ENST00000509828 ZFYVE28Q9HCC9 887 aa13.19□□□□□ -0.3
MBD4-208ENST00000509828 SNAP23O00161 211 aa13.18□□□□□ -0.3
MBD4-208ENST00000509828 KIF22Q14807 665 aa13.18□□□□□ -0.3
MBD4-208ENST00000509828 TAF1CQ15572 869 aaPredicted RBP13.18□□□□□ -0.3
MBD4-208ENST00000509828 SLC9C1Q4G0N8 1177 aa13.18□□□□□ -0.3
MBD4-208ENST00000509828 G2E3Q7L622 706 aa13.18□□□□□ -0.3
MBD4-208ENST00000509828 CERS5Q8N5B7 392 aa13.18□□□□□ -0.3
MBD4-208ENST00000509828 OPTNQ96CV9 577 aa13.18□□□□□ -0.3
MBD4-208ENST00000509828 PLA2G12BQ9BX93 195 aa13.18□□□□□ -0.3
MBD4-208ENST00000509828 PCDHAC2Q9Y5I4 1007 aa13.18□□□□□ -0.3
MBD4-208ENST00000509828 PSME4Q14997 1843 aa13.18□□□□□ -0.3
MBD4-208ENST00000509828 CSF1RP07333 972 aa13.17□□□□□ -0.3
MBD4-208ENST00000509828 TNNI2P48788 182 aa13.17□□□□□ -0.3
MBD4-208ENST00000509828 CCDC57Q2TAC2 916 aa13.17□□□□□ -0.3
MBD4-208ENST00000509828 LINS1Q8NG48 757 aa13.17□□□□□ -0.3
MBD4-208ENST00000509828 DNAAF4Q8WXU2 420 aa13.17□□□□□ -0.3
MBD4-208ENST00000509828 ARMC5Q96C12 935 aa13.17□□□□□ -0.3
MBD4-208ENST00000509828 CNNM1Q9NRU3 951 aa13.17□□□□□ -0.3
MBD4-208ENST00000509828 CSADQ9Y600 493 aa13.17□□□□□ -0.3
MBD4-208ENST00000509828 CCL15-CCL14A0A0B4J2E2 113 aa13.16□□□□□ -0.3
MBD4-208ENST00000509828 IL1R1P14778 569 aa13.16□□□□□ -0.3
MBD4-208ENST00000509828 GTF2A2P52657 109 aa13.16□□□□□ -0.3
MBD4-208ENST00000509828 FKBP1AP62942 108 aaKnown RBP13.16□□□□□ -0.3
MBD4-208ENST00000509828 FLIIQ13045 1269 aa13.16□□□□□ -0.3
MBD4-208ENST00000509828 CCL15Q16663 113 aa13.16□□□□□ -0.3
MBD4-208ENST00000509828 LDHAL6AQ6ZMR3 332 aa13.16□□□□□ -0.3
MBD4-208ENST00000509828 PTPN18Q99952 460 aa13.16□□□□□ -0.3
MBD4-208ENST00000509828 ZNF70Q9UC06 446 aaPredicted RBP13.16□□□□□ -0.3
MBD4-208ENST00000509828 TTF2Q9UNY4 1162 aaKnown RBP13.16□□□□□ -0.3
MBD4-208ENST00000509828 TCP10L2B9ZVM9 353 aa13.15□□□□□ -0.3
MBD4-208ENST00000509828 GJA5P36382 358 aa13.15□□□□□ -0.3
MBD4-208ENST00000509828 MAP3K9P80192 1104 aa13.15□□□□□ -0.3
MBD4-208ENST00000509828 C15orf52Q6ZUT6 534 aaKnown RBP13.15□□□□□ -0.3
MBD4-208ENST00000509828 TDRD3Q9H7E2 651 aaKnown RBP13.15□□□□□ -0.3
MBD4-208ENST00000509828 TESPA1A2RU30 521 aaPredicted RBP13.14□□□□□ -0.31
MBD4-208ENST00000509828 FRAT2O75474 233 aaPredicted RBP13.14□□□□□ -0.31
MBD4-208ENST00000509828 MFSD14BQ5SR56 506 aa13.14□□□□□ -0.31
MBD4-208ENST00000509828 VPS37DQ86XT2 251 aa13.14□□□□□ -0.31
MBD4-208ENST00000509828 OTUD5Q96G74 571 aa13.14□□□□□ -0.31
MBD4-208ENST00000509828 COLQQ9Y215 455 aaPredicted RBP13.14□□□□□ -0.31
MBD4-208ENST00000509828 PTCH2Q9Y6C5 1203 aa13.14□□□□□ -0.31
MBD4-208ENST00000509828 SPEF2Q9C093 1822 aa13.13□□□□□ -0.31
MBD4-208ENST00000509828 ECM2O94769 699 aaPredicted RBP13.13□□□□□ -0.31
MBD4-208ENST00000509828 HIBADHP31937 336 aaKnown RBP13.13□□□□□ -0.31
MBD4-208ENST00000509828 SPDYE2Q495Y8 402 aa13.13□□□□□ -0.31
MBD4-208ENST00000509828 LMBR1LQ6UX01 489 aa13.13□□□□□ -0.31
MBD4-208ENST00000509828 ZNF594Q96JF6 807 aaPredicted RBP13.13□□□□□ -0.31
MBD4-208ENST00000509828 ZNF333Q96JL9 665 aa13.13□□□□□ -0.31
MBD4-208ENST00000509828 PRKRIP1Q9H875 184 aaPredicted RBP13.13□□□□□ -0.31
MBD4-208ENST00000509828 SERPINA10Q9UK55 444 aa13.13□□□□□ -0.31
MBD4-208ENST00000509828 SSC5DA1L4H1 1573 aa13.12□□□□□ -0.31
MBD4-208ENST00000509828 CETPP11597 493 aa13.12□□□□□ -0.31
MBD4-208ENST00000509828 FXR1P51114 621 aaKnown RBP eCLIP13.12□□□□□ -0.31
MBD4-208ENST00000509828 CASP7P55210 303 aa13.12□□□□□ -0.31
MBD4-208ENST00000509828 DZIP1LQ8IYY4 767 aaKnown RBP13.12□□□□□ -0.31
MBD4-208ENST00000509828 CNKSR2Q8WXI2 1034 aa13.12□□□□□ -0.31
MBD4-208ENST00000509828 BRI3BPQ8WY22 251 aa13.12□□□□□ -0.31
MBD4-208ENST00000509828 DPF3Q92784 378 aa13.12□□□□□ -0.31
MBD4-208ENST00000509828 C9orf78Q9NZ63 289 aaPredicted RBP13.12□□□□□ -0.31
MBD4-208ENST00000509828 TMOD2Q9NZR1 351 aa13.12□□□□□ -0.31
MBD4-208ENST00000509828 AOX1Q06278 1338 aa13.12□□□□□ -0.31
MBD4-208ENST00000509828 H0YGN5 161 aa13.11□□□□□ -0.31
MBD4-208ENST00000509828 GYG1P46976 350 aa13.11□□□□□ -0.31
MBD4-208ENST00000509828 FOXO4P98177 505 aa13.11□□□□□ -0.31
MBD4-208ENST00000509828 CHAF1AQ13111 956 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms