RNA–Protein interactions for RNA: ENST00000509692.5

SKP2-205, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-205ENST00000509692 ZNF280AP59817 542 aaPredicted RBP20.24■□□□□ 0.83
SKP2-205ENST00000509692 ZC3H15Q8WU90 426 aaKnown RBP20.24■□□□□ 0.83
SKP2-205ENST00000509692 FAM84BQ96KN1 310 aaPredicted RBP20.24■□□□□ 0.83
SKP2-205ENST00000509692 EXOC6BQ9Y2D4 811 aa20.24■□□□□ 0.83
SKP2-205ENST00000509692 USP17L8P0C7I0 530 aa20.24■□□□□ 0.83
SKP2-205ENST00000509692 CEP126Q9P2H0 1117 aa20.24■□□□□ 0.83
SKP2-205ENST00000509692 TRAF5O00463 557 aa20.23■□□□□ 0.83
SKP2-205ENST00000509692 HDAC1Q13547 482 aaPredicted RBP20.23■□□□□ 0.83
SKP2-205ENST00000509692 KIF4BQ2VIQ3 1234 aa20.23■□□□□ 0.83
SKP2-205ENST00000509692 HSP90AB4PQ58FF6 505 aa20.23■□□□□ 0.83
SKP2-205ENST00000509692 GLIS2Q9BZE0 524 aaPredicted RBP20.22■□□□□ 0.83
SKP2-205ENST00000509692 SASH1O94885 1247 aa20.21■□□□□ 0.83
SKP2-205ENST00000509692 FGFR2P21802 821 aa20.21■□□□□ 0.83
SKP2-205ENST00000509692 HIBADHP31937 336 aaKnown RBP20.21■□□□□ 0.83
SKP2-205ENST00000509692 TFCP2Q12800 502 aa20.21■□□□□ 0.83
SKP2-205ENST00000509692 RWDD1Q9H446 243 aaPredicted RBP20.21■□□□□ 0.83
SKP2-205ENST00000509692 DCTPP1Q9H773 170 aa20.21■□□□□ 0.83
SKP2-205ENST00000509692 CREBZFQ9NS37 354 aa20.21■□□□□ 0.83
SKP2-205ENST00000509692 JAG2Q9Y219 1238 aa20.21■□□□□ 0.83
SKP2-205ENST00000509692 MYO3BQ8WXR4 1341 aa20.21■□□□□ 0.83
SKP2-205ENST00000509692 ASTN2O75129 1339 aaPredicted RBP20.2■□□□□ 0.82
SKP2-205ENST00000509692 FBXO33Q7Z6M2 555 aa20.2■□□□□ 0.82
SKP2-205ENST00000509692 ERC1Q8IUD2 1116 aa20.2■□□□□ 0.82
SKP2-205ENST00000509692 CERS5Q8N5B7 392 aa20.2■□□□□ 0.82
SKP2-205ENST00000509692 TDRD7Q8NHU6 1098 aaKnown RBP20.2■□□□□ 0.82
SKP2-205ENST00000509692 MYOZ2Q9NPC6 264 aa20.2■□□□□ 0.82
SKP2-205ENST00000509692 TRPM7Q96QT4 1865 aa20.2■□□□□ 0.82
SKP2-205ENST00000509692 PUM3Q15397 648 aaKnown RBP20.2■□□□□ 0.82
SKP2-205ENST00000509692 KIAA0825Q8IV33 1275 aa20.2■□□□□ 0.82
SKP2-205ENST00000509692 TMEM88BA6NKF7 163 aa20.19■□□□□ 0.82
SKP2-205ENST00000509692 APBB1O00213 710 aa20.19■□□□□ 0.82
SKP2-205ENST00000509692 RAB11FIP3O75154 756 aa20.19■□□□□ 0.82
SKP2-205ENST00000509692 DLK2Q6UY11 383 aa20.19■□□□□ 0.82
SKP2-205ENST00000509692 KLRG1Q96E93 195 aa20.19■□□□□ 0.82
SKP2-205ENST00000509692 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.19■□□□□ 0.82
SKP2-205ENST00000509692 SCARF1Q14162 830 aa20.18■□□□□ 0.82
SKP2-205ENST00000509692 CDC37L1Q7L3B6 337 aa20.18■□□□□ 0.82
SKP2-205ENST00000509692 FAM205AQ6ZU69 1335 aa20.17■□□□□ 0.82
SKP2-205ENST00000509692 IGHDP01880 384 aa20.17■□□□□ 0.82
SKP2-205ENST00000509692 BCAMP50895 628 aa20.17■□□□□ 0.82
SKP2-205ENST00000509692 ATP2B3Q16720 1220 aa20.17■□□□□ 0.82
SKP2-205ENST00000509692 CST9Q5W186 159 aa20.17■□□□□ 0.82
SKP2-205ENST00000509692 OGFOD1Q8N543 542 aa20.17■□□□□ 0.82
SKP2-205ENST00000509692 RHPN1Q8TCX5 695 aa20.17■□□□□ 0.82
SKP2-205ENST00000509692 KIF1BPQ96EK5 621 aa20.17■□□□□ 0.82
SKP2-205ENST00000509692 IQSEC3Q9UPP2 1182 aaPredicted RBP20.17■□□□□ 0.82
SKP2-205ENST00000509692 AKAP2Q9Y2D5 859 aa20.17■□□□□ 0.82
SKP2-205ENST00000509692 IFIT1P09914 478 aaKnown RBP20.16■□□□□ 0.82
SKP2-205ENST00000509692 SLC5A1P13866 664 aa20.16■□□□□ 0.82
SKP2-205ENST00000509692 CAVIN4Q5BKX8 364 aa20.16■□□□□ 0.82
SKP2-205ENST00000509692 USP48Q86UV5 1035 aa20.16■□□□□ 0.82
SKP2-205ENST00000509692 VPS37DQ86XT2 251 aa20.16■□□□□ 0.82
SKP2-205ENST00000509692 LPIN2Q92539 896 aa20.16■□□□□ 0.82
SKP2-205ENST00000509692 GGA3Q9NZ52 723 aa20.16■□□□□ 0.82
SKP2-205ENST00000509692 ARAP2Q8WZ64 1704 aa20.16■□□□□ 0.82
SKP2-205ENST00000509692 FKBP1AP62942 108 aaKnown RBP20.16■□□□□ 0.82
SKP2-205ENST00000509692 NBPF9Q3BBW0 867 aa20.16■□□□□ 0.82
SKP2-205ENST00000509692 DCPSQ96C86 337 aaKnown RBP20.16■□□□□ 0.82
SKP2-205ENST00000509692 GCC1Q96CN9 775 aa20.16■□□□□ 0.82
SKP2-205ENST00000509692 TIMM10P62072 90 aa20.15■□□□□ 0.82
SKP2-205ENST00000509692 ANGEL2Q5VTE6 544 aaKnown RBP20.15■□□□□ 0.82
SKP2-205ENST00000509692 ERICH6BQ5W0A0 696 aa20.15■□□□□ 0.82
SKP2-205ENST00000509692 KRT26Q7Z3Y9 468 aa20.15■□□□□ 0.82
SKP2-205ENST00000509692 GPR108Q9NPR9 543 aa20.15■□□□□ 0.82
SKP2-205ENST00000509692 A0A1B0GUL7 405 aa20.14■□□□□ 0.81
SKP2-205ENST00000509692 ADM5C9JUS6 153 aa20.14■□□□□ 0.81
SKP2-205ENST00000509692 F8W031 263 aaPredicted RBP20.14■□□□□ 0.81
SKP2-205ENST00000509692 WNT10BO00744 389 aa20.14■□□□□ 0.81
SKP2-205ENST00000509692 TNNI3KQ59H18 835 aa20.14■□□□□ 0.81
SKP2-205ENST00000509692 LRRCC1Q9C099 1032 aa20.14■□□□□ 0.81
SKP2-205ENST00000509692 IL1RAPL2Q9NP60 686 aa20.14■□□□□ 0.81
SKP2-205ENST00000509692 MKRN1Q9UHC7 482 aaKnown RBP20.14■□□□□ 0.81
SKP2-205ENST00000509692 FPGT-TNNI3KV9GXZ4 949 aa20.14■□□□□ 0.81
SKP2-205ENST00000509692 MMP14P50281 582 aa20.13■□□□□ 0.81
SKP2-205ENST00000509692 NEUROD6Q96NK8 337 aa20.13■□□□□ 0.81
SKP2-205ENST00000509692 HDAC9Q9UKV0 1011 aa20.13■□□□□ 0.81
SKP2-205ENST00000509692 CELF2O95319 508 aaKnown RBP20.13■□□□□ 0.81
SKP2-205ENST00000509692 MFSD14BQ5SR56 506 aa20.13■□□□□ 0.81
SKP2-205ENST00000509692 ZBED3Q96IU2 234 aaPredicted RBP20.13■□□□□ 0.81
SKP2-205ENST00000509692 SCAF8Q9UPN6 1271 aaKnown RBP20.13■□□□□ 0.81
SKP2-205ENST00000509692 PCDHAC2Q9Y5I4 1007 aa20.13■□□□□ 0.81
SKP2-205ENST00000509692 SMARCA5O60264 1052 aaPredicted RBP20.12■□□□□ 0.81
SKP2-205ENST00000509692 CHAF1AQ13111 956 aaPredicted RBP20.12■□□□□ 0.81
SKP2-205ENST00000509692 SMC5Q8IY18 1101 aa20.12■□□□□ 0.81
SKP2-205ENST00000509692 CLASRPQ8N2M8 674 aaKnown RBP20.12■□□□□ 0.81
SKP2-205ENST00000509692 EAF2Q96CJ1 260 aaPredicted RBP20.12■□□□□ 0.81
SKP2-205ENST00000509692 BCL11AQ9H165 835 aa20.12■□□□□ 0.81
SKP2-205ENST00000509692 MYH13Q9UKX3 1938 aa20.11■□□□□ 0.81
SKP2-205ENST00000509692 FRAT2O75474 233 aaPredicted RBP20.11■□□□□ 0.81
SKP2-205ENST00000509692 ADORA1P30542 326 aa20.11■□□□□ 0.81
SKP2-205ENST00000509692 GRIK5Q16478 980 aa20.11■□□□□ 0.81
SKP2-205ENST00000509692 SULF1Q8IWU6 871 aa20.11■□□□□ 0.81
SKP2-205ENST00000509692 JMYQ8N9B5 988 aa20.11■□□□□ 0.81
SKP2-205ENST00000509692 XAGE2Q96GT9 111 aa20.11■□□□□ 0.81
SKP2-205ENST00000509692 ZNF408Q9H9D4 720 aa20.11■□□□□ 0.81
SKP2-205ENST00000509692 ABT1Q9ULW3 272 aaKnown RBP20.11■□□□□ 0.81
SKP2-205ENST00000509692 CNTNAP1P78357 1384 aa20.11■□□□□ 0.81
SKP2-205ENST00000509692 AACSQ86V21 672 aa20.1■□□□□ 0.81
SKP2-205ENST00000509692 PITPNM2Q9BZ72 1349 aa20.1■□□□□ 0.81
SKP2-205ENST00000509692 RASSF10A6NK89 507 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms