RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 REM2Q8IYK8 340 aaPredicted RBP20.31■□□□□ 0.84
RAB40C-202ENST00000509637 F8W031 263 aaPredicted RBP20.3■□□□□ 0.84
RAB40C-202ENST00000509637 GPR25O00155 361 aa20.3■□□□□ 0.84
RAB40C-202ENST00000509637 MTMR14Q8NCE2 650 aa20.3■□□□□ 0.84
RAB40C-202ENST00000509637 PUS3Q9BZE2 481 aaKnown RBP20.3■□□□□ 0.84
RAB40C-202ENST00000509637 DEFB129Q9H1M3 183 aa20.3■□□□□ 0.84
RAB40C-202ENST00000509637 ANGEL1Q9UNK9 670 aaKnown RBP20.3■□□□□ 0.84
RAB40C-202ENST00000509637 CLRN2A0PK11 232 aa20.29■□□□□ 0.84
RAB40C-202ENST00000509637 GJA5P36382 358 aa20.29■□□□□ 0.84
RAB40C-202ENST00000509637 APOBEC3FQ8IUX4 373 aaKnown RBP20.29■□□□□ 0.84
RAB40C-202ENST00000509637 KCNJ4P48050 445 aa20.28■□□□□ 0.84
RAB40C-202ENST00000509637 CAP1Q01518 475 aa20.28■□□□□ 0.84
RAB40C-202ENST00000509637 IFIT5Q13325 482 aaKnown RBP20.28■□□□□ 0.84
RAB40C-202ENST00000509637 DLGAP5Q15398 846 aa20.28■□□□□ 0.84
RAB40C-202ENST00000509637 GRIK5Q16478 980 aa20.28■□□□□ 0.84
RAB40C-202ENST00000509637 MAP3K11Q16584 847 aa20.28■□□□□ 0.84
RAB40C-202ENST00000509637 CFAP100Q494V2 611 aa20.28■□□□□ 0.84
RAB40C-202ENST00000509637 CDAN1Q8IWY9 1227 aa20.28■□□□□ 0.84
RAB40C-202ENST00000509637 HDAC9Q9UKV0 1011 aa20.28■□□□□ 0.84
RAB40C-202ENST00000509637 PDE4DIPQ5VU43 2346 aa20.28■□□□□ 0.84
RAB40C-202ENST00000509637 SPDYE2BA6NHP3 402 aa20.27■□□□□ 0.84
RAB40C-202ENST00000509637 PLIN1O60240 522 aa20.27■□□□□ 0.84
RAB40C-202ENST00000509637 SPDYE6P0CI01 402 aa20.27■□□□□ 0.84
RAB40C-202ENST00000509637 NBPF12Q5TAG4 269 aaPredicted RBP20.27■□□□□ 0.84
RAB40C-202ENST00000509637 ARMC9Q7Z3E5 817 aa20.27■□□□□ 0.84
RAB40C-202ENST00000509637 SUCLG2Q96I99 432 aa20.27■□□□□ 0.84
RAB40C-202ENST00000509637 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.27■□□□□ 0.84
RAB40C-202ENST00000509637 CHMP3Q9Y3E7 222 aa20.27■□□□□ 0.84
RAB40C-202ENST00000509637 GRM8O00222 908 aa20.26■□□□□ 0.83
RAB40C-202ENST00000509637 MMP14P50281 582 aa20.26■□□□□ 0.83
RAB40C-202ENST00000509637 CFHR5Q9BXR6 569 aa20.26■□□□□ 0.83
RAB40C-202ENST00000509637 IGF2BP3O00425 579 aaKnown RBP eCLIP20.25■□□□□ 0.83
RAB40C-202ENST00000509637 USP2O75604 605 aaPredicted RBP20.25■□□□□ 0.83
RAB40C-202ENST00000509637 NF2P35240 595 aa20.25■□□□□ 0.83
RAB40C-202ENST00000509637 NOM1Q5C9Z4 860 aaKnown RBP20.25■□□□□ 0.83
RAB40C-202ENST00000509637 ECM29Q5VYK3 1845 aa20.25■□□□□ 0.83
RAB40C-202ENST00000509637 GYG1P46976 350 aa20.24■□□□□ 0.83
RAB40C-202ENST00000509637 FKBP1AP62942 108 aaKnown RBP20.24■□□□□ 0.83
RAB40C-202ENST00000509637 LDHAL6AQ6ZMR3 332 aa20.24■□□□□ 0.83
RAB40C-202ENST00000509637 TDRD7Q8NHU6 1098 aaKnown RBP20.24■□□□□ 0.83
RAB40C-202ENST00000509637 WNK4Q96J92 1243 aa20.24■□□□□ 0.83
RAB40C-202ENST00000509637 FAM84BQ96KN1 310 aaPredicted RBP20.24■□□□□ 0.83
RAB40C-202ENST00000509637 NBPF7P0C2Y1 421 aaPredicted RBP20.23■□□□□ 0.83
RAB40C-202ENST00000509637 RIPOR2Q9Y4F9 1068 aa20.23■□□□□ 0.83
RAB40C-202ENST00000509637 FAM205AQ6ZU69 1335 aa20.23■□□□□ 0.83
RAB40C-202ENST00000509637 RASA3Q14644 834 aa20.22■□□□□ 0.83
RAB40C-202ENST00000509637 ZNF804AQ7Z570 1209 aa20.22■□□□□ 0.83
RAB40C-202ENST00000509637 IFNL1Q8IU54 200 aa20.22■□□□□ 0.83
RAB40C-202ENST00000509637 SLC10A4Q96EP9 437 aa20.22■□□□□ 0.83
RAB40C-202ENST00000509637 PTPN18Q99952 460 aa20.22■□□□□ 0.83
RAB40C-202ENST00000509637 FKTNO75072 461 aa20.21■□□□□ 0.83
RAB40C-202ENST00000509637 CCDC57Q2TAC2 916 aa20.21■□□□□ 0.83
RAB40C-202ENST00000509637 TEPSINQ96N21 525 aa20.21■□□□□ 0.83
RAB40C-202ENST00000509637 COL1A1P02452 1464 aaPredicted RBP20.21■□□□□ 0.83
RAB40C-202ENST00000509637 ZNF521Q96K83 1311 aa20.21■□□□□ 0.83
RAB40C-202ENST00000509637 ALDH1L1O75891 902 aa20.2■□□□□ 0.82
RAB40C-202ENST00000509637 SREBF2Q12772 1141 aa20.2■□□□□ 0.82
RAB40C-202ENST00000509637 PKN2Q16513 984 aaKnown RBP20.2■□□□□ 0.82
RAB40C-202ENST00000509637 LRRC24Q50LG9 513 aa20.2■□□□□ 0.82
RAB40C-202ENST00000509637 FBXO46Q6PJ61 603 aaPredicted RBP20.2■□□□□ 0.82
RAB40C-202ENST00000509637 SLC4A10Q6U841 1118 aa20.2■□□□□ 0.82
RAB40C-202ENST00000509637 ANKRD44Q8N8A2 993 aa20.2■□□□□ 0.82
RAB40C-202ENST00000509637 CNKSR2Q8WXI2 1034 aa20.2■□□□□ 0.82
RAB40C-202ENST00000509637 TDRD3Q9H7E2 651 aaKnown RBP20.2■□□□□ 0.82
RAB40C-202ENST00000509637 VEZTQ9HBM0 779 aa20.2■□□□□ 0.82
RAB40C-202ENST00000509637 CNNM1Q9NRU3 951 aa20.2■□□□□ 0.82
RAB40C-202ENST00000509637 ZNF70Q9UC06 446 aaPredicted RBP20.2■□□□□ 0.82
RAB40C-202ENST00000509637 LAMB1P07942 1786 aa20.2■□□□□ 0.82
RAB40C-202ENST00000509637 C9orf78Q9NZ63 289 aaPredicted RBP20.19■□□□□ 0.82
RAB40C-202ENST00000509637 IQSEC3Q9UPP2 1182 aaPredicted RBP20.19■□□□□ 0.82
RAB40C-202ENST00000509637 UTYO14607 1347 aa20.19■□□□□ 0.82
RAB40C-202ENST00000509637 OTOFQ9HC10 1997 aa20.18■□□□□ 0.82
RAB40C-202ENST00000509637 UBE4AQ14139 1066 aa20.18■□□□□ 0.82
RAB40C-202ENST00000509637 SPDYE2Q495Y8 402 aa20.18■□□□□ 0.82
RAB40C-202ENST00000509637 MFSD14BQ5SR56 506 aa20.18■□□□□ 0.82
RAB40C-202ENST00000509637 FBXO33Q7Z6M2 555 aa20.18■□□□□ 0.82
RAB40C-202ENST00000509637 FAM9BQ8IZU0 186 aa20.18■□□□□ 0.82
RAB40C-202ENST00000509637 SRCIN1Q9C0H9 1055 aa20.18■□□□□ 0.82
RAB40C-202ENST00000509637 PPP2R3BQ9Y5P8 575 aa20.18■□□□□ 0.82
RAB40C-202ENST00000509637 MANSC4A6NHS7 340 aaPredicted RBP20.17■□□□□ 0.82
RAB40C-202ENST00000509637 HIBADHP31937 336 aaKnown RBP20.17■□□□□ 0.82
RAB40C-202ENST00000509637 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.17■□□□□ 0.82
RAB40C-202ENST00000509637 MRPL50Q8N5N7 158 aaKnown RBP20.17■□□□□ 0.82
RAB40C-202ENST00000509637 VGLL2Q8N8G2 317 aa20.17■□□□□ 0.82
RAB40C-202ENST00000509637 KLHDC4Q8TBB5 520 aa20.17■□□□□ 0.82
RAB40C-202ENST00000509637 MS4A4AQ96JQ5 239 aa20.17■□□□□ 0.82
RAB40C-202ENST00000509637 BICC1Q9H694 974 aaKnown RBP20.17■□□□□ 0.82
RAB40C-202ENST00000509637 TTF2Q9UNY4 1162 aaKnown RBP20.17■□□□□ 0.82
RAB40C-202ENST00000509637 HTTP42858 3142 aa20.16■□□□□ 0.82
RAB40C-202ENST00000509637 TESPA1A2RU30 521 aaPredicted RBP20.16■□□□□ 0.82
RAB40C-202ENST00000509637 PPP1R12BO60237 982 aaPredicted RBP20.16■□□□□ 0.82
RAB40C-202ENST00000509637 ZBTB48P10074 688 aaPredicted RBP20.16■□□□□ 0.82
RAB40C-202ENST00000509637 RBM5P52756 815 aaKnown RBP eCLIP20.16■□□□□ 0.82
RAB40C-202ENST00000509637 RABL6Q3YEC7 729 aaPredicted RBP20.16■□□□□ 0.82
RAB40C-202ENST00000509637 TAF7LQ5H9L4 462 aa20.16■□□□□ 0.82
RAB40C-202ENST00000509637 OTOP1Q7RTM1 612 aa20.16■□□□□ 0.82
RAB40C-202ENST00000509637 DZIP1LQ8IYY4 767 aaKnown RBP20.16■□□□□ 0.82
RAB40C-202ENST00000509637 ANP32CO43423 234 aa20.15■□□□□ 0.82
RAB40C-202ENST00000509637 CRHR2Q13324 411 aa20.15■□□□□ 0.82
RAB40C-202ENST00000509637 SUPT20HL1Q3ZLR7 823 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms