RNA–Protein interactions for RNA: ENST00000509589.5

CYSTM1-203, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 3

Gene CYSTM1, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-203ENST00000509589 MPHOSPH8Q99549 860 aa13.17□□□□□ -0.3
CYSTM1-203ENST00000509589 PLA2G12BQ9BX93 195 aa13.17□□□□□ -0.3
CYSTM1-203ENST00000509589 ANKRD2Q9GZV1 360 aa13.17□□□□□ -0.3
CYSTM1-203ENST00000509589 CD209Q9NNX6 404 aa13.17□□□□□ -0.3
CYSTM1-203ENST00000509589 TRIM17Q9Y577 477 aa13.17□□□□□ -0.3
CYSTM1-203ENST00000509589 COL1A1P02452 1464 aaPredicted RBP13.16□□□□□ -0.3
CYSTM1-203ENST00000509589 MANSC4A6NHS7 340 aaPredicted RBP13.16□□□□□ -0.3
CYSTM1-203ENST00000509589 SLC4A2P04920 1241 aa13.16□□□□□ -0.3
CYSTM1-203ENST00000509589 GJA5P36382 358 aa13.16□□□□□ -0.3
CYSTM1-203ENST00000509589 CAP1Q01518 475 aa13.16□□□□□ -0.3
CYSTM1-203ENST00000509589 MAP3K11Q16584 847 aa13.16□□□□□ -0.3
CYSTM1-203ENST00000509589 TWISTNBQ3B726 338 aaPredicted RBP13.16□□□□□ -0.3
CYSTM1-203ENST00000509589 WNK4Q96J92 1243 aa13.16□□□□□ -0.3
CYSTM1-203ENST00000509589 CHMP3Q9Y3E7 222 aa13.16□□□□□ -0.3
CYSTM1-203ENST00000509589 ALDH1A1P00352 501 aa13.15□□□□□ -0.3
CYSTM1-203ENST00000509589 MMP14P50281 582 aa13.15□□□□□ -0.3
CYSTM1-203ENST00000509589 FLIIQ13045 1269 aa13.15□□□□□ -0.3
CYSTM1-203ENST00000509589 CFAP100Q494V2 611 aa13.15□□□□□ -0.3
CYSTM1-203ENST00000509589 NBPF12Q5TAG4 269 aaPredicted RBP13.15□□□□□ -0.3
CYSTM1-203ENST00000509589 PRMT6Q96LA8 375 aaPredicted RBP13.15□□□□□ -0.3
CYSTM1-203ENST00000509589 CHMP4AQ9BY43 222 aa13.15□□□□□ -0.3
CYSTM1-203ENST00000509589 LAMB1P07942 1786 aa13.15□□□□□ -0.31
CYSTM1-203ENST00000509589 SPDYE2BA6NHP3 402 aa13.14□□□□□ -0.31
CYSTM1-203ENST00000509589 SPDYE6P0CI01 402 aa13.14□□□□□ -0.31
CYSTM1-203ENST00000509589 ZBTB48P10074 688 aaPredicted RBP13.14□□□□□ -0.31
CYSTM1-203ENST00000509589 CRHR2Q13324 411 aa13.14□□□□□ -0.31
CYSTM1-203ENST00000509589 FKBP5Q13451 457 aaPredicted RBP13.14□□□□□ -0.31
CYSTM1-203ENST00000509589 MTMR14Q8NCE2 650 aa13.14□□□□□ -0.31
CYSTM1-203ENST00000509589 CD99L2Q8TCZ2 262 aa13.14□□□□□ -0.31
CYSTM1-203ENST00000509589 ARAP2Q8WZ64 1704 aa13.13□□□□□ -0.31
CYSTM1-203ENST00000509589 ANKRD18BA2A2Z9 1011 aa13.13□□□□□ -0.31
CYSTM1-203ENST00000509589 PPP1R12BO60237 982 aaPredicted RBP13.13□□□□□ -0.31
CYSTM1-203ENST00000509589 PLIN1O60240 522 aa13.13□□□□□ -0.31
CYSTM1-203ENST00000509589 INHBEP58166 350 aa13.13□□□□□ -0.31
CYSTM1-203ENST00000509589 FOXO4P98177 505 aa13.13□□□□□ -0.31
CYSTM1-203ENST00000509589 CDAN1Q8IWY9 1227 aa13.13□□□□□ -0.31
CYSTM1-203ENST00000509589 WWC1Q8IX03 1113 aa13.13□□□□□ -0.31
CYSTM1-203ENST00000509589 LINS1Q8NG48 757 aa13.13□□□□□ -0.31
CYSTM1-203ENST00000509589 DNAAF4Q8WXU2 420 aa13.13□□□□□ -0.31
CYSTM1-203ENST00000509589 PTPN18Q99952 460 aa13.13□□□□□ -0.31
CYSTM1-203ENST00000509589 VEZTQ9HBM0 779 aa13.13□□□□□ -0.31
CYSTM1-203ENST00000509589 PPP2R3BQ9Y5P8 575 aa13.13□□□□□ -0.31
CYSTM1-203ENST00000509589 MYH13Q9UKX3 1938 aa13.13□□□□□ -0.31
CYSTM1-203ENST00000509589 ZSWIM8A7E2V4 1837 aa13.12□□□□□ -0.31
CYSTM1-203ENST00000509589 F6X3S4 739 aa13.12□□□□□ -0.31
CYSTM1-203ENST00000509589 USP2O75604 605 aaPredicted RBP13.12□□□□□ -0.31
CYSTM1-203ENST00000509589 IL1R1P14778 569 aa13.12□□□□□ -0.31
CYSTM1-203ENST00000509589 C15orf52Q6ZUT6 534 aaKnown RBP13.12□□□□□ -0.31
CYSTM1-203ENST00000509589 MYH16Q9H6N6 1097 aa13.12□□□□□ -0.31
CYSTM1-203ENST00000509589 RBM5P52756 815 aaKnown RBP eCLIP13.11□□□□□ -0.31
CYSTM1-203ENST00000509589 IFIT5Q13325 482 aaKnown RBP13.11□□□□□ -0.31
CYSTM1-203ENST00000509589 RASA3Q14644 834 aa13.11□□□□□ -0.31
CYSTM1-203ENST00000509589 SUPT20HL1Q3ZLR7 823 aa13.11□□□□□ -0.31
CYSTM1-203ENST00000509589 HABP4Q5JVS0 413 aaKnown RBP13.11□□□□□ -0.31
CYSTM1-203ENST00000509589 EPHA10Q5JZY3 1008 aa13.11□□□□□ -0.31
CYSTM1-203ENST00000509589 ZNF804AQ7Z570 1209 aa13.11□□□□□ -0.31
CYSTM1-203ENST00000509589 CNKSR2Q8WXI2 1034 aa13.11□□□□□ -0.31
CYSTM1-203ENST00000509589 ZNF594Q96JF6 807 aaPredicted RBP13.11□□□□□ -0.31
CYSTM1-203ENST00000509589 PTPN22Q9Y2R2 807 aa13.11□□□□□ -0.31
CYSTM1-203ENST00000509589 AK9Q5TCS8 1911 aa13.1□□□□□ -0.31
CYSTM1-203ENST00000509589 MYO1BO43795 1136 aa13.1□□□□□ -0.31
CYSTM1-203ENST00000509589 EN2P19622 333 aaPredicted RBP13.1□□□□□ -0.31
CYSTM1-203ENST00000509589 IREB2P48200 963 aaKnown RBP13.1□□□□□ -0.31
CYSTM1-203ENST00000509589 CCDC27Q2M243 656 aa13.1□□□□□ -0.31
CYSTM1-203ENST00000509589 ERO1AQ96HE7 468 aa13.1□□□□□ -0.31
CYSTM1-203ENST00000509589 ELP3Q9H9T3 547 aa13.1□□□□□ -0.31
CYSTM1-203ENST00000509589 FANCIQ9NVI1 1328 aa13.1□□□□□ -0.31
CYSTM1-203ENST00000509589 RBBP6Q7Z6E9 1792 aaKnown RBP13.09□□□□□ -0.31
CYSTM1-203ENST00000509589 FKBP1AP62942 108 aaKnown RBP13.09□□□□□ -0.31
CYSTM1-203ENST00000509589 INTS3Q68E01 1043 aaKnown RBP13.09□□□□□ -0.31
CYSTM1-203ENST00000509589 LMBR1LQ6UX01 489 aa13.09□□□□□ -0.31
CYSTM1-203ENST00000509589 ANKRD13AQ8IZ07 590 aa13.09□□□□□ -0.31
CYSTM1-203ENST00000509589 ARMC5Q96C12 935 aa13.09□□□□□ -0.31
CYSTM1-203ENST00000509589 OPTNQ96CV9 577 aa13.09□□□□□ -0.31
CYSTM1-203ENST00000509589 EFCC1Q9HA90 598 aa13.09□□□□□ -0.31
CYSTM1-203ENST00000509589 KIAA0100Q14667 2235 aaKnown RBP13.09□□□□□ -0.31
CYSTM1-203ENST00000509589 TESPA1A2RU30 521 aaPredicted RBP13.08□□□□□ -0.32
CYSTM1-203ENST00000509589 UNCXA6NJT0 531 aa13.08□□□□□ -0.32
CYSTM1-203ENST00000509589 SP3Q02447 781 aa13.08□□□□□ -0.32
CYSTM1-203ENST00000509589 EXOSC9Q06265 439 aaKnown RBP13.08□□□□□ -0.32
CYSTM1-203ENST00000509589 SPDYE2Q495Y8 402 aa13.08□□□□□ -0.32
CYSTM1-203ENST00000509589 TAF7LQ5H9L4 462 aa13.08□□□□□ -0.32
CYSTM1-203ENST00000509589 BEND3Q5T5X7 828 aa13.08□□□□□ -0.32
CYSTM1-203ENST00000509589 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.08□□□□□ -0.32
CYSTM1-203ENST00000509589 GCC1Q96CN9 775 aa13.08□□□□□ -0.32
CYSTM1-203ENST00000509589 MS4A4AQ96JQ5 239 aa13.08□□□□□ -0.32
CYSTM1-203ENST00000509589 TEPSINQ96N21 525 aa13.08□□□□□ -0.32
CYSTM1-203ENST00000509589 TDRD3Q9H7E2 651 aaKnown RBP13.08□□□□□ -0.32
CYSTM1-203ENST00000509589 ZNF70Q9UC06 446 aaPredicted RBP13.08□□□□□ -0.32
CYSTM1-203ENST00000509589 VAMP4O75379 141 aa13.07□□□□□ -0.32
CYSTM1-203ENST00000509589 GYG1P46976 350 aa13.07□□□□□ -0.32
CYSTM1-203ENST00000509589 GRIK5Q16478 980 aa13.07□□□□□ -0.32
CYSTM1-203ENST00000509589 MFSD14BQ5SR56 506 aa13.07□□□□□ -0.32
CYSTM1-203ENST00000509589 OTUD7BQ6GQQ9 843 aa13.07□□□□□ -0.32
CYSTM1-203ENST00000509589 LDHAL6AQ6ZMR3 332 aa13.07□□□□□ -0.32
CYSTM1-203ENST00000509589 BRI3BPQ8WY22 251 aa13.07□□□□□ -0.32
CYSTM1-203ENST00000509589 TMEM39BQ9GZU3 492 aa13.07□□□□□ -0.32
CYSTM1-203ENST00000509589 TTF2Q9UNY4 1162 aaKnown RBP13.07□□□□□ -0.32
CYSTM1-203ENST00000509589 IL16Q14005 1332 aa13.07□□□□□ -0.32
CYSTM1-203ENST00000509589 FAM205AQ6ZU69 1335 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms