RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 GDF15Q99988 308 aa17.84■□□□□ 0.45
HMGCR-208ENST00000509431 RNF208Q9H0X6 261 aa17.84■□□□□ 0.45
HMGCR-208ENST00000509431 TSPYL4Q9UJ04 414 aa17.84■□□□□ 0.45
HMGCR-208ENST00000509431 OTOFQ9HC10 1997 aa17.83■□□□□ 0.44
HMGCR-208ENST00000509431 MYO1BO43795 1136 aa17.83■□□□□ 0.44
HMGCR-208ENST00000509431 TRIM28Q13263 835 aaKnown RBP17.83■□□□□ 0.44
HMGCR-208ENST00000509431 KIAA0825Q8IV33 1275 aa17.83■□□□□ 0.44
HMGCR-208ENST00000509431 ANKRD18AQ8IVF6 992 aa17.83■□□□□ 0.44
HMGCR-208ENST00000509431 MTMR14Q8NCE2 650 aa17.83■□□□□ 0.44
HMGCR-208ENST00000509431 ZNF428Q96B54 188 aa17.83■□□□□ 0.44
HMGCR-208ENST00000509431 TRIM47Q96LD4 638 aa17.83■□□□□ 0.44
HMGCR-208ENST00000509431 SRRDQ9UH36 339 aa17.83■□□□□ 0.44
HMGCR-208ENST00000509431 TTLL5Q6EMB2 1281 aa17.82■□□□□ 0.44
HMGCR-208ENST00000509431 FAM43AQ8N2R8 423 aa17.82■□□□□ 0.44
HMGCR-208ENST00000509431 RAET1EQ8TD07 263 aa17.82■□□□□ 0.44
HMGCR-208ENST00000509431 U2AF1L4Q8WU68 220 aaKnown RBP17.82■□□□□ 0.44
HMGCR-208ENST00000509431 ELP3Q9H9T3 547 aa17.82■□□□□ 0.44
HMGCR-208ENST00000509431 RIPOR2Q9Y4F9 1068 aa17.82■□□□□ 0.44
HMGCR-208ENST00000509431 RTL5Q5HYW3 569 aaPredicted RBP17.81■□□□□ 0.44
HMGCR-208ENST00000509431 NBPF12Q5TAG4 269 aaPredicted RBP17.81■□□□□ 0.44
HMGCR-208ENST00000509431 BABAM1Q9NWV8 329 aa17.81■□□□□ 0.44
HMGCR-208ENST00000509431 ATP5J2-PTCD1G3V325 749 aa17.8■□□□□ 0.44
HMGCR-208ENST00000509431 ZBTB38Q8NAP3 1195 aaPredicted RBP17.8■□□□□ 0.44
HMGCR-208ENST00000509431 RPTORQ8N122 1335 aa17.79■□□□□ 0.44
HMGCR-208ENST00000509431 SGPL1O95470 568 aa17.79■□□□□ 0.44
HMGCR-208ENST00000509431 BIN2Q9UBW5 565 aaPredicted RBP17.79■□□□□ 0.44
HMGCR-208ENST00000509431 BCAMP50895 628 aa17.78■□□□□ 0.44
HMGCR-208ENST00000509431 CNGB1Q14028 1251 aaPredicted RBP17.78■□□□□ 0.44
HMGCR-208ENST00000509431 NFE2L2Q16236 605 aa17.78■□□□□ 0.44
HMGCR-208ENST00000509431 TDHQ8IZJ6 230 aa17.78■□□□□ 0.44
HMGCR-208ENST00000509431 ALPK3Q96L96 1907 aa17.78■□□□□ 0.44
HMGCR-208ENST00000509431 PDE8AO60658 829 aa17.77■□□□□ 0.44
HMGCR-208ENST00000509431 CETPP11597 493 aa17.77■□□□□ 0.44
HMGCR-208ENST00000509431 COL9A1P20849 921 aa17.77■□□□□ 0.44
HMGCR-208ENST00000509431 PSMC4P43686 418 aa17.77■□□□□ 0.44
HMGCR-208ENST00000509431 CDC5LQ99459 802 aaKnown RBP17.77■□□□□ 0.44
HMGCR-208ENST00000509431 OSBPP22059 807 aa17.76■□□□□ 0.43
HMGCR-208ENST00000509431 CCT4P50991 539 aaKnown RBP17.76■□□□□ 0.43
HMGCR-208ENST00000509431 TNFAIP1Q13829 316 aa17.76■□□□□ 0.43
HMGCR-208ENST00000509431 SLAIN1Q8ND83 568 aa17.76■□□□□ 0.43
HMGCR-208ENST00000509431 VEZTQ9HBM0 779 aa17.76■□□□□ 0.43
HMGCR-208ENST00000509431 MYPNQ86TC9 1320 aa17.75■□□□□ 0.43
HMGCR-208ENST00000509431 GTF2IP78347 998 aa17.75■□□□□ 0.43
HMGCR-208ENST00000509431 RASA3Q14644 834 aa17.75■□□□□ 0.43
HMGCR-208ENST00000509431 FAM109BQ6ICB4 259 aaPredicted RBP17.75■□□□□ 0.43
HMGCR-208ENST00000509431 C17orf99Q6UX52 265 aa17.75■□□□□ 0.43
HMGCR-208ENST00000509431 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.75■□□□□ 0.43
HMGCR-208ENST00000509431 BSDC1Q9NW68 430 aaPredicted RBP17.75■□□□□ 0.43
HMGCR-208ENST00000509431 LEMD3Q9Y2U8 911 aa17.75■□□□□ 0.43
HMGCR-208ENST00000509431 CSADQ9Y600 493 aa17.75■□□□□ 0.43
HMGCR-208ENST00000509431 CLRN2A0PK11 232 aa17.74■□□□□ 0.43
HMGCR-208ENST00000509431 SPDYE2BA6NHP3 402 aa17.74■□□□□ 0.43
HMGCR-208ENST00000509431 FMNL1O95466 1100 aaPredicted RBP17.74■□□□□ 0.43
HMGCR-208ENST00000509431 SPDYE6P0CI01 402 aa17.74■□□□□ 0.43
HMGCR-208ENST00000509431 MAP3K9P80192 1104 aa17.74■□□□□ 0.43
HMGCR-208ENST00000509431 CNKSR2Q8WXI2 1034 aa17.74■□□□□ 0.43
HMGCR-208ENST00000509431 MINPP1Q9UNW1 487 aa17.74■□□□□ 0.43
HMGCR-208ENST00000509431 BTBD19C9JJ37 291 aa17.73■□□□□ 0.43
HMGCR-208ENST00000509431 TFRCP02786 760 aaKnown RBP17.73■□□□□ 0.43
HMGCR-208ENST00000509431 VGLL4Q14135 290 aa17.73■□□□□ 0.43
HMGCR-208ENST00000509431 CFAP100Q494V2 611 aa17.73■□□□□ 0.43
HMGCR-208ENST00000509431 SYMPKQ92797 1274 aaKnown RBP17.73■□□□□ 0.43
HMGCR-208ENST00000509431 UNC93B1Q9H1C4 597 aa17.73■□□□□ 0.43
HMGCR-208ENST00000509431 CHPF2Q9P2E5 772 aa17.73■□□□□ 0.43
HMGCR-208ENST00000509431 FAM205AQ6ZU69 1335 aa17.72■□□□□ 0.43
HMGCR-208ENST00000509431 PCCAP05165 728 aaPredicted RBP17.72■□□□□ 0.43
HMGCR-208ENST00000509431 CTGFP29279 349 aa17.72■□□□□ 0.43
HMGCR-208ENST00000509431 NECAB2Q7Z6G3 386 aa17.72■□□□□ 0.43
HMGCR-208ENST00000509431 SPDYE5A6NIY4 337 aa17.71■□□□□ 0.43
HMGCR-208ENST00000509431 SNAPC2Q13487 334 aa17.71■□□□□ 0.43
HMGCR-208ENST00000509431 TXNRD3Q86VQ6 643 aa17.71■□□□□ 0.43
HMGCR-208ENST00000509431 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.71■□□□□ 0.43
HMGCR-208ENST00000509431 PRMT6Q96LA8 375 aaPredicted RBP17.71■□□□□ 0.43
HMGCR-208ENST00000509431 CCDC85AQ96PX6 553 aaPredicted RBP17.71■□□□□ 0.43
HMGCR-208ENST00000509431 PLEKHF1Q96S99 279 aa17.71■□□□□ 0.43
HMGCR-208ENST00000509431 DBF4Q9UBU7 674 aaPredicted RBP17.71■□□□□ 0.43
HMGCR-208ENST00000509431 ADGRA2Q96PE1 1338 aa17.71■□□□□ 0.42
HMGCR-208ENST00000509431 ERO1BQ86YB8 467 aa17.7■□□□□ 0.42
HMGCR-208ENST00000509431 C7orf61Q8IZ16 206 aa17.7■□□□□ 0.42
HMGCR-208ENST00000509431 CCDC191Q8NCU4 936 aa17.7■□□□□ 0.42
HMGCR-208ENST00000509431 GUCD1Q96NT3 240 aa17.7■□□□□ 0.42
HMGCR-208ENST00000509431 PNNQ9H307 717 aaKnown RBP17.7■□□□□ 0.42
HMGCR-208ENST00000509431 ZMYND8Q9ULU4 1186 aaPredicted RBP17.7■□□□□ 0.42
HMGCR-208ENST00000509431 VCANP13611 3396 aa17.7■□□□□ 0.42
HMGCR-208ENST00000509431 SPEF2Q9C093 1822 aa17.7■□□□□ 0.42
HMGCR-208ENST00000509431 TTC28Q96AY4 2481 aa17.69■□□□□ 0.42
HMGCR-208ENST00000509431 POTEB2H3BUK9 544 aa17.69■□□□□ 0.42
HMGCR-208ENST00000509431 PLA2G5P39877 138 aa17.69■□□□□ 0.42
HMGCR-208ENST00000509431 MAGEA10P43363 369 aaPredicted RBP17.69■□□□□ 0.42
HMGCR-208ENST00000509431 FCGRTP55899 365 aa17.69■□□□□ 0.42
HMGCR-208ENST00000509431 FKBP1AP62942 108 aaKnown RBP17.69■□□□□ 0.42
HMGCR-208ENST00000509431 PAWRQ96IZ0 340 aaKnown RBP17.69■□□□□ 0.42
HMGCR-208ENST00000509431 UBE2OQ9C0C9 1292 aaKnown RBP17.69■□□□□ 0.42
HMGCR-208ENST00000509431 HYPKQ9NX55 129 aa17.69■□□□□ 0.42
HMGCR-208ENST00000509431 CPA4Q9UI42 421 aa17.69■□□□□ 0.42
HMGCR-208ENST00000509431 PCDHAC2Q9Y5I4 1007 aa17.69■□□□□ 0.42
HMGCR-208ENST00000509431 MGAMO43451 1857 aa17.69■□□□□ 0.42
HMGCR-208ENST00000509431 CLSPNQ9HAW4 1339 aa17.69■□□□□ 0.42
HMGCR-208ENST00000509431 IRS2Q9Y4H2 1338 aa17.69■□□□□ 0.42
HMGCR-208ENST00000509431 ECM2O94769 699 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms