RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 ARMC9Q7Z3E5 817 aa19.39■□□□□ 0.69
TPM3-219ENST00000509409 CERS5Q8N5B7 392 aa19.39■□□□□ 0.69
TPM3-219ENST00000509409 PUS3Q9BZE2 481 aaKnown RBP19.39■□□□□ 0.69
TPM3-219ENST00000509409 MCOLN1Q9GZU1 580 aa19.39■□□□□ 0.69
TPM3-219ENST00000509409 IRS2Q9Y4H2 1338 aa19.39■□□□□ 0.69
TPM3-219ENST00000509409 RBM5P52756 815 aaKnown RBP eCLIP19.38■□□□□ 0.69
TPM3-219ENST00000509409 UBE4AQ14139 1066 aa19.38■□□□□ 0.69
TPM3-219ENST00000509409 CFAP100Q494V2 611 aa19.38■□□□□ 0.69
TPM3-219ENST00000509409 PSME4Q14997 1843 aa19.37■□□□□ 0.69
TPM3-219ENST00000509409 PTPRCP08575 1304 aa19.37■□□□□ 0.69
TPM3-219ENST00000509409 MYO1BO43795 1136 aa19.37■□□□□ 0.69
TPM3-219ENST00000509409 HIBADHP31937 336 aaKnown RBP19.37■□□□□ 0.69
TPM3-219ENST00000509409 SSH1Q8WYL5 1049 aa19.37■□□□□ 0.69
TPM3-219ENST00000509409 KAZALD1Q96I82 304 aa19.37■□□□□ 0.69
TPM3-219ENST00000509409 ZBED3Q96IU2 234 aaPredicted RBP19.37■□□□□ 0.69
TPM3-219ENST00000509409 BICC1Q9H694 974 aaKnown RBP19.37■□□□□ 0.69
TPM3-219ENST00000509409 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.37■□□□□ 0.69
TPM3-219ENST00000509409 GYG1P46976 350 aa19.36■□□□□ 0.69
TPM3-219ENST00000509409 FKBP1AP62942 108 aaKnown RBP19.36■□□□□ 0.69
TPM3-219ENST00000509409 SLFN5Q08AF3 891 aa19.36■□□□□ 0.69
TPM3-219ENST00000509409 MKRN3Q13064 507 aaKnown RBP19.36■□□□□ 0.69
TPM3-219ENST00000509409 MTMR14Q8NCE2 650 aa19.36■□□□□ 0.69
TPM3-219ENST00000509409 DEFB129Q9H1M3 183 aa19.36■□□□□ 0.69
TPM3-219ENST00000509409 PCDHAC2Q9Y5I4 1007 aa19.36■□□□□ 0.69
TPM3-219ENST00000509409 UTYO14607 1347 aa19.35■□□□□ 0.69
TPM3-219ENST00000509409 MROH5Q6ZUA9 1318 aa19.35■□□□□ 0.69
TPM3-219ENST00000509409 CLRN2A0PK11 232 aa19.35■□□□□ 0.69
TPM3-219ENST00000509409 VPS37DQ86XT2 251 aa19.35■□□□□ 0.69
TPM3-219ENST00000509409 VEZTQ9HBM0 779 aa19.35■□□□□ 0.69
TPM3-219ENST00000509409 ANGEL1Q9UNK9 670 aaKnown RBP19.35■□□□□ 0.69
TPM3-219ENST00000509409 RIPOR2Q9Y4F9 1068 aa19.35■□□□□ 0.69
TPM3-219ENST00000509409 PTPN12Q05209 780 aaKnown RBP19.34■□□□□ 0.69
TPM3-219ENST00000509409 METTL24Q5JXM2 366 aa19.34■□□□□ 0.69
TPM3-219ENST00000509409 TDRD7Q8NHU6 1098 aaKnown RBP19.34■□□□□ 0.69
TPM3-219ENST00000509409 FAM84BQ96KN1 310 aaPredicted RBP19.34■□□□□ 0.69
TPM3-219ENST00000509409 PRMT6Q96LA8 375 aaPredicted RBP19.34■□□□□ 0.69
TPM3-219ENST00000509409 SPDYE2BA6NHP3 402 aa19.33■□□□□ 0.68
TPM3-219ENST00000509409 FRAT2O75474 233 aaPredicted RBP19.33■□□□□ 0.68
TPM3-219ENST00000509409 SPDYE6P0CI01 402 aa19.33■□□□□ 0.68
TPM3-219ENST00000509409 LRRC24Q50LG9 513 aa19.33■□□□□ 0.68
TPM3-219ENST00000509409 MFSD14BQ5SR56 506 aa19.33■□□□□ 0.68
TPM3-219ENST00000509409 CDCA7LQ96GN5 454 aa19.33■□□□□ 0.68
TPM3-219ENST00000509409 PAPPA2Q9BXP8 1791 aa19.33■□□□□ 0.68
TPM3-219ENST00000509409 FAM205AQ6ZU69 1335 aa19.32■□□□□ 0.68
TPM3-219ENST00000509409 CASP8AP2Q9UKL3 1982 aa19.32■□□□□ 0.68
TPM3-219ENST00000509409 PPP1R12BO60237 982 aaPredicted RBP19.32■□□□□ 0.68
TPM3-219ENST00000509409 ALDH1L2Q3SY69 923 aa19.32■□□□□ 0.68
TPM3-219ENST00000509409 RABL6Q3YEC7 729 aaPredicted RBP19.32■□□□□ 0.68
TPM3-219ENST00000509409 ANKRD44Q8N8A2 993 aa19.32■□□□□ 0.68
TPM3-219ENST00000509409 SLC10A4Q96EP9 437 aa19.32■□□□□ 0.68
TPM3-219ENST00000509409 SMC4Q9NTJ3 1288 aa19.32■□□□□ 0.68
TPM3-219ENST00000509409 TTF2Q9UNY4 1162 aaKnown RBP19.32■□□□□ 0.68
TPM3-219ENST00000509409 CHAF1AQ13111 956 aaPredicted RBP19.31■□□□□ 0.68
TPM3-219ENST00000509409 SUPT20HL1Q3ZLR7 823 aa19.31■□□□□ 0.68
TPM3-219ENST00000509409 CAVIN4Q5BKX8 364 aa19.31■□□□□ 0.68
TPM3-219ENST00000509409 USP44Q9H0E7 712 aa19.31■□□□□ 0.68
TPM3-219ENST00000509409 FZD1Q9UP38 647 aa19.31■□□□□ 0.68
TPM3-219ENST00000509409 PPP2R3BQ9Y5P8 575 aa19.31■□□□□ 0.68
TPM3-219ENST00000509409 TBC1D8O95759 1140 aa19.3■□□□□ 0.68
TPM3-219ENST00000509409 TM4SF4P48230 202 aa19.3■□□□□ 0.68
TPM3-219ENST00000509409 SREBF2Q12772 1141 aa19.3■□□□□ 0.68
TPM3-219ENST00000509409 KLHDC4Q8TBB5 520 aa19.3■□□□□ 0.68
TPM3-219ENST00000509409 IQSEC3Q9UPP2 1182 aaPredicted RBP19.3■□□□□ 0.68
TPM3-219ENST00000509409 LDLRAD1Q5T700 205 aa19.29■□□□□ 0.68
TPM3-219ENST00000509409 FBXO33Q7Z6M2 555 aa19.29■□□□□ 0.68
TPM3-219ENST00000509409 PDE8BO95263 885 aa19.28■□□□□ 0.68
TPM3-219ENST00000509409 RASA3Q14644 834 aa19.28■□□□□ 0.68
TPM3-219ENST00000509409 NBPF12Q5TAG4 269 aaPredicted RBP19.28■□□□□ 0.68
TPM3-219ENST00000509409 SERPINA10Q9UK55 444 aa19.28■□□□□ 0.68
TPM3-219ENST00000509409 BCAMP50895 628 aa19.27■□□□□ 0.68
TPM3-219ENST00000509409 SPRYD7Q5W111 196 aa19.27■□□□□ 0.68
TPM3-219ENST00000509409 CTU1Q7Z7A3 348 aaKnown RBP19.27■□□□□ 0.68
TPM3-219ENST00000509409 TDRD3Q9H7E2 651 aaKnown RBP19.27■□□□□ 0.68
TPM3-219ENST00000509409 ZNF70Q9UC06 446 aaPredicted RBP19.27■□□□□ 0.68
TPM3-219ENST00000509409 COL1A1P02452 1464 aaPredicted RBP19.27■□□□□ 0.67
TPM3-219ENST00000509409 AOX1Q06278 1338 aa19.26■□□□□ 0.67
TPM3-219ENST00000509409 IFIT1P09914 478 aaKnown RBP19.26■□□□□ 0.67
TPM3-219ENST00000509409 CRKP46108 304 aa19.26■□□□□ 0.67
TPM3-219ENST00000509409 IREB2P48200 963 aaKnown RBP19.26■□□□□ 0.67
TPM3-219ENST00000509409 MLLT1Q03111 559 aaPredicted RBP19.26■□□□□ 0.67
TPM3-219ENST00000509409 TNFAIP1Q13829 316 aa19.26■□□□□ 0.67
TPM3-219ENST00000509409 MAP3K11Q16584 847 aa19.26■□□□□ 0.67
TPM3-219ENST00000509409 DZIP1LQ8IYY4 767 aaKnown RBP19.26■□□□□ 0.67
TPM3-219ENST00000509409 TBC1D22AQ8WUA7 517 aa19.26■□□□□ 0.67
TPM3-219ENST00000509409 NOB1Q9ULX3 412 aaKnown RBP19.26■□□□□ 0.67
TPM3-219ENST00000509409 ZNF646O15015 1829 aaPredicted RBP19.25■□□□□ 0.67
TPM3-219ENST00000509409 TCP10L2B9ZVM9 353 aa19.25■□□□□ 0.67
TPM3-219ENST00000509409 TRMT2AQ8IZ69 625 aaKnown RBP19.25■□□□□ 0.67
TPM3-219ENST00000509409 CLMNQ96JQ2 1002 aa19.25■□□□□ 0.67
TPM3-219ENST00000509409 MANSC4A6NHS7 340 aaPredicted RBP19.24■□□□□ 0.67
TPM3-219ENST00000509409 EYA2O00167 538 aa19.24■□□□□ 0.67
TPM3-219ENST00000509409 USP2O75604 605 aaPredicted RBP19.24■□□□□ 0.67
TPM3-219ENST00000509409 CT47B1P0C2W7 299 aaPredicted RBP19.24■□□□□ 0.67
TPM3-219ENST00000509409 UBTFL1P0CB47 393 aaPredicted RBP19.24■□□□□ 0.67
TPM3-219ENST00000509409 INHBEP58166 350 aa19.24■□□□□ 0.67
TPM3-219ENST00000509409 PUM3Q15397 648 aaKnown RBP19.24■□□□□ 0.67
TPM3-219ENST00000509409 SPDYE2Q495Y8 402 aa19.24■□□□□ 0.67
TPM3-219ENST00000509409 VGLL2Q8N8G2 317 aa19.24■□□□□ 0.67
TPM3-219ENST00000509409 ZNF296Q8WUU4 475 aaPredicted RBP19.24■□□□□ 0.67
TPM3-219ENST00000509409 AKAP11Q9UKA4 1901 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms