RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 CEP85Q6P2H3 762 aa10.9□□□□□ -0.66
PDLIM5-213ENST00000509357 VPS37DQ86XT2 251 aa10.9□□□□□ -0.66
PDLIM5-213ENST00000509357 KIAA0825Q8IV33 1275 aa10.9□□□□□ -0.66
PDLIM5-213ENST00000509357 VGLL2Q8N8G2 317 aa10.9□□□□□ -0.66
PDLIM5-213ENST00000509357 AIDAQ96BJ3 306 aa10.9□□□□□ -0.66
PDLIM5-213ENST00000509357 RIPOR2Q9Y4F9 1068 aa10.9□□□□□ -0.66
PDLIM5-213ENST00000509357 ADAMTSL1Q8N6G6 1762 aa10.9□□□□□ -0.67
PDLIM5-213ENST00000509357 ADM5C9JUS6 153 aa10.89□□□□□ -0.67
PDLIM5-213ENST00000509357 F8W031 263 aaPredicted RBP10.89□□□□□ -0.67
PDLIM5-213ENST00000509357 FRAT2O75474 233 aaPredicted RBP10.89□□□□□ -0.67
PDLIM5-213ENST00000509357 GNAI2P04899 355 aa10.89□□□□□ -0.67
PDLIM5-213ENST00000509357 GNAI3P08754 354 aa10.89□□□□□ -0.67
PDLIM5-213ENST00000509357 UBE4AQ14139 1066 aa10.89□□□□□ -0.67
PDLIM5-213ENST00000509357 DLK2Q6UY11 383 aa10.89□□□□□ -0.67
PDLIM5-213ENST00000509357 GMLQ99445 158 aa10.89□□□□□ -0.67
PDLIM5-213ENST00000509357 JAG2Q9Y219 1238 aa10.89□□□□□ -0.67
PDLIM5-213ENST00000509357 PCDHB15Q9Y5E8 787 aa10.89□□□□□ -0.67
PDLIM5-213ENST00000509357 TLL2Q9Y6L7 1015 aa10.89□□□□□ -0.67
PDLIM5-213ENST00000509357 ASTN2O75129 1339 aaPredicted RBP10.88□□□□□ -0.67
PDLIM5-213ENST00000509357 WDR33Q9C0J8 1336 aaKnown RBP10.88□□□□□ -0.67
PDLIM5-213ENST00000509357 HIBADHP31937 336 aaKnown RBP10.88□□□□□ -0.67
PDLIM5-213ENST00000509357 GYG1P46976 350 aa10.88□□□□□ -0.67
PDLIM5-213ENST00000509357 CAVIN4Q5BKX8 364 aa10.88□□□□□ -0.67
PDLIM5-213ENST00000509357 CYP4F22Q6NT55 531 aa10.88□□□□□ -0.67
PDLIM5-213ENST00000509357 C15orf52Q6ZUT6 534 aaKnown RBP10.88□□□□□ -0.67
PDLIM5-213ENST00000509357 C2orf69Q8N8R5 385 aa10.88□□□□□ -0.67
PDLIM5-213ENST00000509357 EXOC6Q8TAG9 804 aa10.88□□□□□ -0.67
PDLIM5-213ENST00000509357 SSH3Q8TE77 659 aa10.88□□□□□ -0.67
PDLIM5-213ENST00000509357 CAPNS2Q96L46 248 aa10.88□□□□□ -0.67
PDLIM5-213ENST00000509357 SRGAP3O43295 1099 aa10.87□□□□□ -0.67
PDLIM5-213ENST00000509357 SASH1O94885 1247 aa10.87□□□□□ -0.67
PDLIM5-213ENST00000509357 IL1R1P14778 569 aa10.87□□□□□ -0.67
PDLIM5-213ENST00000509357 MMP14P50281 582 aa10.87□□□□□ -0.67
PDLIM5-213ENST00000509357 RBM5P52756 815 aaKnown RBP eCLIP10.87□□□□□ -0.67
PDLIM5-213ENST00000509357 HUNKP57058 714 aa10.87□□□□□ -0.67
PDLIM5-213ENST00000509357 ATP8B2P98198 1209 aa10.87□□□□□ -0.67
PDLIM5-213ENST00000509357 DLGAP5Q15398 846 aa10.87□□□□□ -0.67
PDLIM5-213ENST00000509357 NBPF9Q3BBW0 867 aa10.87□□□□□ -0.67
PDLIM5-213ENST00000509357 SAPCD2Q86UD0 394 aa10.87□□□□□ -0.67
PDLIM5-213ENST00000509357 BEGAINQ9BUH8 593 aa10.87□□□□□ -0.67
PDLIM5-213ENST00000509357 SIL1Q9H173 461 aa10.87□□□□□ -0.67
PDLIM5-213ENST00000509357 COPRSQ9NQ92 184 aa10.87□□□□□ -0.67
PDLIM5-213ENST00000509357 DDX19BQ9UMR2 479 aa10.87□□□□□ -0.67
PDLIM5-213ENST00000509357 EYA2O00167 538 aa10.86□□□□□ -0.67
PDLIM5-213ENST00000509357 PDE8BO95263 885 aa10.86□□□□□ -0.67
PDLIM5-213ENST00000509357 IFIT1P09914 478 aaKnown RBP10.86□□□□□ -0.67
PDLIM5-213ENST00000509357 MAP2K1Q02750 393 aaPredicted RBP10.86□□□□□ -0.67
PDLIM5-213ENST00000509357 CHAF1AQ13111 956 aaPredicted RBP10.86□□□□□ -0.67
PDLIM5-213ENST00000509357 CDCA5Q96FF9 252 aa10.86□□□□□ -0.67
PDLIM5-213ENST00000509357 GBA2Q9HCG7 927 aaPredicted RBP10.86□□□□□ -0.67
PDLIM5-213ENST00000509357 SCAF8Q9UPN6 1271 aaKnown RBP10.86□□□□□ -0.67
PDLIM5-213ENST00000509357 COL1A1P02452 1464 aaPredicted RBP10.86□□□□□ -0.67
PDLIM5-213ENST00000509357 ZNF609O15014 1411 aa10.85□□□□□ -0.67
PDLIM5-213ENST00000509357 WNT10BO00744 389 aa10.85□□□□□ -0.67
PDLIM5-213ENST00000509357 MYO1BO43795 1136 aa10.85□□□□□ -0.67
PDLIM5-213ENST00000509357 SLC5A1P13866 664 aa10.85□□□□□ -0.67
PDLIM5-213ENST00000509357 FGFR2P21802 821 aa10.85□□□□□ -0.67
PDLIM5-213ENST00000509357 TTLL12Q14166 644 aaPredicted RBP10.85□□□□□ -0.67
PDLIM5-213ENST00000509357 PUM3Q15397 648 aaKnown RBP10.85□□□□□ -0.67
PDLIM5-213ENST00000509357 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.85□□□□□ -0.67
PDLIM5-213ENST00000509357 FAM84BQ96KN1 310 aaPredicted RBP10.85□□□□□ -0.67
PDLIM5-213ENST00000509357 IQSEC3Q9UPP2 1182 aaPredicted RBP10.85□□□□□ -0.67
PDLIM5-213ENST00000509357 MYH13Q9UKX3 1938 aa10.85□□□□□ -0.67
PDLIM5-213ENST00000509357 MYO5AQ9Y4I1 1855 aaKnown RBP10.85□□□□□ -0.67
PDLIM5-213ENST00000509357 PITPNM2Q9BZ72 1349 aa10.84□□□□□ -0.67
PDLIM5-213ENST00000509357 AKAP11Q9UKA4 1901 aa10.84□□□□□ -0.67
PDLIM5-213ENST00000509357 AOC2O75106 756 aa10.84□□□□□ -0.67
PDLIM5-213ENST00000509357 MS4A1P11836 297 aa10.84□□□□□ -0.67
PDLIM5-213ENST00000509357 NF2P35240 595 aa10.84□□□□□ -0.67
PDLIM5-213ENST00000509357 ZNF157P51786 506 aaPredicted RBP10.84□□□□□ -0.67
PDLIM5-213ENST00000509357 CFAP100Q494V2 611 aa10.84□□□□□ -0.67
PDLIM5-213ENST00000509357 MFSD14BQ5SR56 506 aa10.84□□□□□ -0.67
PDLIM5-213ENST00000509357 APOBEC3FQ8IUX4 373 aaKnown RBP10.84□□□□□ -0.67
PDLIM5-213ENST00000509357 CERS5Q8N5B7 392 aa10.84□□□□□ -0.67
PDLIM5-213ENST00000509357 TDRD7Q8NHU6 1098 aaKnown RBP10.84□□□□□ -0.67
PDLIM5-213ENST00000509357 HHIPL1Q96JK4 782 aa10.84□□□□□ -0.67
PDLIM5-213ENST00000509357 CEP126Q9P2H0 1117 aa10.84□□□□□ -0.67
PDLIM5-213ENST00000509357 FOXN1O15353 648 aa10.83□□□□□ -0.68
PDLIM5-213ENST00000509357 ADORA1P30542 326 aa10.83□□□□□ -0.68
PDLIM5-213ENST00000509357 MAP2K2P36507 400 aa10.83□□□□□ -0.68
PDLIM5-213ENST00000509357 CTCFP49711 727 aaPredicted RBP10.83□□□□□ -0.68
PDLIM5-213ENST00000509357 BCAMP50895 628 aa10.83□□□□□ -0.68
PDLIM5-213ENST00000509357 FKBP1AP62942 108 aaKnown RBP10.83□□□□□ -0.68
PDLIM5-213ENST00000509357 COL13A1Q5TAT6 717 aaPredicted RBP10.83□□□□□ -0.68
PDLIM5-213ENST00000509357 PRAMEF18Q5VWM3 479 aa10.83□□□□□ -0.68
PDLIM5-213ENST00000509357 RGMBQ6NW40 437 aa10.83□□□□□ -0.68
PDLIM5-213ENST00000509357 FBXO33Q7Z6M2 555 aa10.83□□□□□ -0.68
PDLIM5-213ENST00000509357 LPIN2Q92539 896 aa10.83□□□□□ -0.68
PDLIM5-213ENST00000509357 WBP1LQ9NX94 342 aa10.83□□□□□ -0.68
PDLIM5-213ENST00000509357 TTF2Q9UNY4 1162 aaKnown RBP10.83□□□□□ -0.68
PDLIM5-213ENST00000509357 EXOC6BQ9Y2D4 811 aa10.83□□□□□ -0.68
PDLIM5-213ENST00000509357 NOP58Q9Y2X3 529 aaKnown RBP10.83□□□□□ -0.68
PDLIM5-213ENST00000509357 FAM205AQ6ZU69 1335 aa10.83□□□□□ -0.68
PDLIM5-213ENST00000509357 CLRN2A0PK11 232 aa10.82□□□□□ -0.68
PDLIM5-213ENST00000509357 CIAO1O76071 339 aa10.82□□□□□ -0.68
PDLIM5-213ENST00000509357 IL15P40933 162 aaPredicted RBP10.82□□□□□ -0.68
PDLIM5-213ENST00000509357 TFCP2Q12800 502 aa10.82□□□□□ -0.68
PDLIM5-213ENST00000509357 ATP2B3Q16720 1220 aa10.82□□□□□ -0.68
PDLIM5-213ENST00000509357 TNS4Q8IZW8 715 aa10.82□□□□□ -0.68
PDLIM5-213ENST00000509357 TBC1D22AQ8WUA7 517 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms