RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 MKRN1Q9UHC7 482 aaKnown RBP20.1■□□□□ 0.81
PDLIM5-212ENST00000509333 JAG2Q9Y219 1238 aa20.1■□□□□ 0.81
PDLIM5-212ENST00000509333 PSME4Q14997 1843 aa20.09■□□□□ 0.81
PDLIM5-212ENST00000509333 WNT10BO00744 389 aa20.09■□□□□ 0.81
PDLIM5-212ENST00000509333 IFIT1P09914 478 aaKnown RBP20.09■□□□□ 0.81
PDLIM5-212ENST00000509333 ATP8B2P98198 1209 aa20.09■□□□□ 0.81
PDLIM5-212ENST00000509333 DEFB115Q30KQ5 88 aa20.09■□□□□ 0.81
PDLIM5-212ENST00000509333 CAVIN4Q5BKX8 364 aa20.09■□□□□ 0.81
PDLIM5-212ENST00000509333 FTSJ3Q8IY81 847 aaKnown RBP20.09■□□□□ 0.81
PDLIM5-212ENST00000509333 PANK1Q8TE04 598 aa20.09■□□□□ 0.81
PDLIM5-212ENST00000509333 PNMA6EA0A0J9YXQ4 647 aa20.08■□□□□ 0.81
PDLIM5-212ENST00000509333 RASSF10A6NK89 507 aa20.08■□□□□ 0.81
PDLIM5-212ENST00000509333 CELF2O95319 508 aaKnown RBP20.08■□□□□ 0.81
PDLIM5-212ENST00000509333 ANGEL2Q5VTE6 544 aaKnown RBP20.08■□□□□ 0.81
PDLIM5-212ENST00000509333 RCAN3Q9UKA8 241 aa20.08■□□□□ 0.81
PDLIM5-212ENST00000509333 HDAC9Q9UKV0 1011 aa20.08■□□□□ 0.81
PDLIM5-212ENST00000509333 VPS37DQ86XT2 251 aa20.07■□□□□ 0.8
PDLIM5-212ENST00000509333 MTMR14Q8NCE2 650 aa20.07■□□□□ 0.8
PDLIM5-212ENST00000509333 IQSEC3Q9UPP2 1182 aaPredicted RBP20.07■□□□□ 0.8
PDLIM5-212ENST00000509333 A0A1B0GUL6 1792 aa20.06■□□□□ 0.8
PDLIM5-212ENST00000509333 ADM5C9JUS6 153 aa20.06■□□□□ 0.8
PDLIM5-212ENST00000509333 SLC5A1P13866 664 aa20.06■□□□□ 0.8
PDLIM5-212ENST00000509333 VEGFBP49765 207 aa20.06■□□□□ 0.8
PDLIM5-212ENST00000509333 ITPRIPQ8IWB1 547 aa20.06■□□□□ 0.8
PDLIM5-212ENST00000509333 SULF1Q8IWU6 871 aa20.06■□□□□ 0.8
PDLIM5-212ENST00000509333 GGA3Q9NZ52 723 aa20.06■□□□□ 0.8
PDLIM5-212ENST00000509333 CNTNAP1P78357 1384 aa20.06■□□□□ 0.8
PDLIM5-212ENST00000509333 F8W031 263 aaPredicted RBP20.05■□□□□ 0.8
PDLIM5-212ENST00000509333 MS4A1P11836 297 aa20.05■□□□□ 0.8
PDLIM5-212ENST00000509333 TIMM10P62072 90 aa20.05■□□□□ 0.8
PDLIM5-212ENST00000509333 POLA2Q14181 598 aa20.05■□□□□ 0.8
PDLIM5-212ENST00000509333 MFSD14BQ5SR56 506 aa20.05■□□□□ 0.8
PDLIM5-212ENST00000509333 SSH3Q8TE77 659 aa20.05■□□□□ 0.8
PDLIM5-212ENST00000509333 PRMT6Q96LA8 375 aaPredicted RBP20.05■□□□□ 0.8
PDLIM5-212ENST00000509333 ABT1Q9ULW3 272 aaKnown RBP20.05■□□□□ 0.8
PDLIM5-212ENST00000509333 TLL2Q9Y6L7 1015 aa20.05■□□□□ 0.8
PDLIM5-212ENST00000509333 PITPNM2Q9BZ72 1349 aa20.04■□□□□ 0.8
PDLIM5-212ENST00000509333 GRIK5Q16478 980 aa20.04■□□□□ 0.8
PDLIM5-212ENST00000509333 ATP2B3Q16720 1220 aa20.04■□□□□ 0.8
PDLIM5-212ENST00000509333 SAPCD2Q86UD0 394 aa20.04■□□□□ 0.8
PDLIM5-212ENST00000509333 SCAF8Q9UPN6 1271 aaKnown RBP20.04■□□□□ 0.8
PDLIM5-212ENST00000509333 PCDHAC2Q9Y5I4 1007 aa20.04■□□□□ 0.8
PDLIM5-212ENST00000509333 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.04■□□□□ 0.8
PDLIM5-212ENST00000509333 TFCP2Q12800 502 aa20.03■□□□□ 0.8
PDLIM5-212ENST00000509333 DLGAP5Q15398 846 aa20.03■□□□□ 0.8
PDLIM5-212ENST00000509333 C1orf115Q9H7X2 142 aa20.03■□□□□ 0.8
PDLIM5-212ENST00000509333 ZNF408Q9H9D4 720 aa20.03■□□□□ 0.8
PDLIM5-212ENST00000509333 ZNF646O15015 1829 aaPredicted RBP20.03■□□□□ 0.8
PDLIM5-212ENST00000509333 FRAT2O75474 233 aaPredicted RBP20.02■□□□□ 0.8
PDLIM5-212ENST00000509333 CHAF1AQ13111 956 aaPredicted RBP20.02■□□□□ 0.8
PDLIM5-212ENST00000509333 G3BP1Q13283 466 aaKnown RBP eCLIP20.02■□□□□ 0.8
PDLIM5-212ENST00000509333 CFAP100Q494V2 611 aa20.02■□□□□ 0.8
PDLIM5-212ENST00000509333 MRIQ9BWK5 157 aa20.02■□□□□ 0.8
PDLIM5-212ENST00000509333 TTF2Q9UNY4 1162 aaKnown RBP20.02■□□□□ 0.8
PDLIM5-212ENST00000509333 ZBTB22O15209 634 aa20.01■□□□□ 0.79
PDLIM5-212ENST00000509333 TBC1D22AQ8WUA7 517 aa20.01■□□□□ 0.79
PDLIM5-212ENST00000509333 CDCA5Q96FF9 252 aa20.01■□□□□ 0.79
PDLIM5-212ENST00000509333 PCNTO95613 3336 aa20.01■□□□□ 0.79
PDLIM5-212ENST00000509333 ADORA1P30542 326 aa20■□□□□ 0.79
PDLIM5-212ENST00000509333 PRAMEF18Q5VWM3 479 aa20■□□□□ 0.79
PDLIM5-212ENST00000509333 HHIPL1Q96JK4 782 aa20■□□□□ 0.79
PDLIM5-212ENST00000509333 AKAP2Q9Y2D5 859 aa20■□□□□ 0.79
PDLIM5-212ENST00000509333 NOP58Q9Y2X3 529 aaKnown RBP20■□□□□ 0.79
PDLIM5-212ENST00000509333 WDR33Q9C0J8 1336 aaKnown RBP20■□□□□ 0.79
PDLIM5-212ENST00000509333 TRPM7Q96QT4 1865 aa19.99■□□□□ 0.79
PDLIM5-212ENST00000509333 SPDYE2BA6NHP3 402 aa19.99■□□□□ 0.79
PDLIM5-212ENST00000509333 SPDYE6P0CI01 402 aa19.99■□□□□ 0.79
PDLIM5-212ENST00000509333 PHKA1P46020 1223 aa19.99■□□□□ 0.79
PDLIM5-212ENST00000509333 HDLBPQ00341 1268 aaKnown RBP19.99■□□□□ 0.79
PDLIM5-212ENST00000509333 C2orf69Q8N8R5 385 aa19.99■□□□□ 0.79
PDLIM5-212ENST00000509333 GBA2Q9HCG7 927 aaPredicted RBP19.99■□□□□ 0.79
PDLIM5-212ENST00000509333 GNL3LQ9NVN8 582 aaKnown RBP19.99■□□□□ 0.79
PDLIM5-212ENST00000509333 SERPINA10Q9UK55 444 aa19.99■□□□□ 0.79
PDLIM5-212ENST00000509333 COG6Q9Y2V7 657 aa19.99■□□□□ 0.79
PDLIM5-212ENST00000509333 AOX1Q06278 1338 aa19.99■□□□□ 0.79
PDLIM5-212ENST00000509333 A0A1B0GUL7 405 aa19.98■□□□□ 0.79
PDLIM5-212ENST00000509333 MVPQ14764 893 aaKnown RBP19.98■□□□□ 0.79
PDLIM5-212ENST00000509333 CCDC102BQ68D86 513 aa19.98■□□□□ 0.79
PDLIM5-212ENST00000509333 CYP4F22Q6NT55 531 aa19.98■□□□□ 0.79
PDLIM5-212ENST00000509333 WDR66Q8TBY9 1149 aa19.98■□□□□ 0.79
PDLIM5-212ENST00000509333 XAGE2Q96GT9 111 aa19.98■□□□□ 0.79
PDLIM5-212ENST00000509333 CAPNS2Q96L46 248 aa19.98■□□□□ 0.79
PDLIM5-212ENST00000509333 ZBTB40Q9NUA8 1239 aa19.98■□□□□ 0.79
PDLIM5-212ENST00000509333 SUGT1Q9Y2Z0 365 aa19.98■□□□□ 0.79
PDLIM5-212ENST00000509333 SURF6O75683 361 aaKnown RBP19.97■□□□□ 0.79
PDLIM5-212ENST00000509333 ECE1P42892 770 aa19.97■□□□□ 0.79
PDLIM5-212ENST00000509333 RBM5P52756 815 aaKnown RBP eCLIP19.97■□□□□ 0.79
PDLIM5-212ENST00000509333 PDE3AQ14432 1141 aa19.97■□□□□ 0.79
PDLIM5-212ENST00000509333 CEP85Q6P2H3 762 aa19.97■□□□□ 0.79
PDLIM5-212ENST00000509333 CRKP46108 304 aa19.96■□□□□ 0.79
PDLIM5-212ENST00000509333 HUNKP57058 714 aa19.96■□□□□ 0.79
PDLIM5-212ENST00000509333 C20orf194Q5TEA3 1177 aa19.96■□□□□ 0.79
PDLIM5-212ENST00000509333 APOBEC3FQ8IUX4 373 aaKnown RBP19.96■□□□□ 0.79
PDLIM5-212ENST00000509333 NEUROD6Q96NK8 337 aa19.96■□□□□ 0.79
PDLIM5-212ENST00000509333 DEFB129Q9H1M3 183 aa19.96■□□□□ 0.79
PDLIM5-212ENST00000509333 DENND2AQ9ULE3 1009 aa19.96■□□□□ 0.79
PDLIM5-212ENST00000509333 DDX19BQ9UMR2 479 aa19.96■□□□□ 0.79
PDLIM5-212ENST00000509333 SEMA3EO15041 775 aa19.95■□□□□ 0.78
PDLIM5-212ENST00000509333 CLRN2A0PK11 232 aa19.94■□□□□ 0.78
PDLIM5-212ENST00000509333 MYO1BO43795 1136 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 897.4 ms