RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 PODXL2Q9NZ53 605 aa9.11□□□□□ -0.95
TOPBP1-207ENST00000509162 MINPP1Q9UNW1 487 aa9.11□□□□□ -0.95
TOPBP1-207ENST00000509162 LHX6Q9UPM6 363 aa9.11□□□□□ -0.95
TOPBP1-207ENST00000509162 GLTPD2A6NH11 291 aa9.1□□□□□ -0.95
TOPBP1-207ENST00000509162 PPIP5K2O43314 1243 aa9.1□□□□□ -0.95
TOPBP1-207ENST00000509162 TBC1D12O60347 775 aa9.1□□□□□ -0.95
TOPBP1-207ENST00000509162 PBX2P40425 430 aa9.1□□□□□ -0.95
TOPBP1-207ENST00000509162 SCNN1DP51172 638 aa9.1□□□□□ -0.95
TOPBP1-207ENST00000509162 LRRC24Q50LG9 513 aa9.1□□□□□ -0.95
TOPBP1-207ENST00000509162 CC2D2BQ6DHV5 1058 aa9.1□□□□□ -0.95
TOPBP1-207ENST00000509162 DPP8Q6V1X1 898 aaPredicted RBP9.1□□□□□ -0.95
TOPBP1-207ENST00000509162 MPNDQ8N594 471 aa9.1□□□□□ -0.95
TOPBP1-207ENST00000509162 VGLL2Q8N8G2 317 aa9.1□□□□□ -0.95
TOPBP1-207ENST00000509162 PANK1Q8TE04 598 aa9.1□□□□□ -0.95
TOPBP1-207ENST00000509162 ARHGAP45Q92619 1136 aa9.1□□□□□ -0.95
TOPBP1-207ENST00000509162 BSDC1Q9NW68 430 aaPredicted RBP9.1□□□□□ -0.95
TOPBP1-207ENST00000509162 LRRFIP2Q9Y608 721 aaKnown RBP9.1□□□□□ -0.95
TOPBP1-207ENST00000509162 ZNF609O15014 1411 aa9.1□□□□□ -0.95
TOPBP1-207ENST00000509162 MED23Q9ULK4 1368 aa9.1□□□□□ -0.95
TOPBP1-207ENST00000509162 SCN4AP35499 1836 aa9.1□□□□□ -0.95
TOPBP1-207ENST00000509162 PLIN1O60240 522 aa9.09□□□□□ -0.95
TOPBP1-207ENST00000509162 UFL1O94874 794 aa9.09□□□□□ -0.95
TOPBP1-207ENST00000509162 CCT4P50991 539 aaKnown RBP9.09□□□□□ -0.95
TOPBP1-207ENST00000509162 CHRNDQ07001 517 aa9.09□□□□□ -0.95
TOPBP1-207ENST00000509162 TMC4Q7Z404 712 aa9.09□□□□□ -0.95
TOPBP1-207ENST00000509162 ANKRD18AQ8IVF6 992 aa9.09□□□□□ -0.95
TOPBP1-207ENST00000509162 FRAT1Q92837 279 aaPredicted RBP9.09□□□□□ -0.95
TOPBP1-207ENST00000509162 YTHDC1Q96MU7 727 aaKnown RBP9.09□□□□□ -0.95
TOPBP1-207ENST00000509162 C1orf115Q9H7X2 142 aa9.09□□□□□ -0.95
TOPBP1-207ENST00000509162 DBNDD1Q9H9R9 158 aa9.09□□□□□ -0.95
TOPBP1-207ENST00000509162 GPBP1L1Q9HC44 474 aaPredicted RBP9.09□□□□□ -0.95
TOPBP1-207ENST00000509162 XDHP47989 1333 aa9.08□□□□□ -0.96
TOPBP1-207ENST00000509162 TAF5LO75529 589 aa9.08□□□□□ -0.96
TOPBP1-207ENST00000509162 EGFRP00533 1210 aa9.08□□□□□ -0.96
TOPBP1-207ENST00000509162 PTPN12Q05209 780 aaKnown RBP9.08□□□□□ -0.96
TOPBP1-207ENST00000509162 CXCL9Q07325 125 aa9.08□□□□□ -0.96
TOPBP1-207ENST00000509162 ATG9AQ7Z3C6 839 aa9.08□□□□□ -0.96
TOPBP1-207ENST00000509162 LARGE2Q8N3Y3 721 aa9.08□□□□□ -0.96
TOPBP1-207ENST00000509162 HELBQ8NG08 1087 aaPredicted RBP9.08□□□□□ -0.96
TOPBP1-207ENST00000509162 CDC5LQ99459 802 aaKnown RBP9.08□□□□□ -0.96
TOPBP1-207ENST00000509162 C9orf78Q9NZ63 289 aaPredicted RBP9.08□□□□□ -0.96
TOPBP1-207ENST00000509162 NSFL1CQ9UNZ2 370 aaKnown RBP9.08□□□□□ -0.96
TOPBP1-207ENST00000509162 PA2G4Q9UQ80 394 aaKnown RBP9.08□□□□□ -0.96
TOPBP1-207ENST00000509162 PNMA6EA0A0J9YXQ4 647 aa9.07□□□□□ -0.96
TOPBP1-207ENST00000509162 ANKRD18BA2A2Z9 1011 aa9.07□□□□□ -0.96
TOPBP1-207ENST00000509162 ECE2O60344 883 aa9.07□□□□□ -0.96
TOPBP1-207ENST00000509162 PPP1R15BQ5SWA1 713 aa9.07□□□□□ -0.96
TOPBP1-207ENST00000509162 ZKSCAN2Q63HK3 967 aa9.07□□□□□ -0.96
TOPBP1-207ENST00000509162 MXD3Q9BW11 206 aa9.07□□□□□ -0.96
TOPBP1-207ENST00000509162 RRAGCQ9HB90 399 aa9.07□□□□□ -0.96
TOPBP1-207ENST00000509162 GGA1Q9UJY5 639 aa9.07□□□□□ -0.96
TOPBP1-207ENST00000509162 CHMP3Q9Y3E7 222 aa9.07□□□□□ -0.96
TOPBP1-207ENST00000509162 RIPOR2Q9Y4F9 1068 aa9.07□□□□□ -0.96
TOPBP1-207ENST00000509162 AOX1Q06278 1338 aa9.06□□□□□ -0.96
TOPBP1-207ENST00000509162 RAD17O75943 681 aa9.06□□□□□ -0.96
TOPBP1-207ENST00000509162 UBTFL1P0CB47 393 aaPredicted RBP9.06□□□□□ -0.96
TOPBP1-207ENST00000509162 IFIT5Q13325 482 aaKnown RBP9.06□□□□□ -0.96
TOPBP1-207ENST00000509162 MTX1Q13505 466 aa9.06□□□□□ -0.96
TOPBP1-207ENST00000509162 NIM1KQ8IY84 436 aa9.06□□□□□ -0.96
TOPBP1-207ENST00000509162 TRPM4Q8TD43 1214 aa9.06□□□□□ -0.96
TOPBP1-207ENST00000509162 OXER1Q8TDS5 423 aa9.06□□□□□ -0.96
TOPBP1-207ENST00000509162 RCAN3Q9UKA8 241 aa9.06□□□□□ -0.96
TOPBP1-207ENST00000509162 C6orf229H3BNL8 230 aa9.05□□□□□ -0.96
TOPBP1-207ENST00000509162 PSMD14O00487 310 aa9.05□□□□□ -0.96
TOPBP1-207ENST00000509162 ZBTB7BO15156 539 aaPredicted RBP9.05□□□□□ -0.96
TOPBP1-207ENST00000509162 FGFR2P21802 821 aa9.05□□□□□ -0.96
TOPBP1-207ENST00000509162 ATP2B4P23634 1241 aa9.05□□□□□ -0.96
TOPBP1-207ENST00000509162 IGHMBP2P38935 993 aaKnown RBP9.05□□□□□ -0.96
TOPBP1-207ENST00000509162 EPS15P42566 896 aa9.05□□□□□ -0.96
TOPBP1-207ENST00000509162 MLLT3P42568 568 aaPredicted RBP9.05□□□□□ -0.96
TOPBP1-207ENST00000509162 GMPSP49915 693 aaPredicted RBP9.05□□□□□ -0.96
TOPBP1-207ENST00000509162 GRIPAP1Q4V328 841 aa9.05□□□□□ -0.96
TOPBP1-207ENST00000509162 DZIP1LQ8IYY4 767 aaKnown RBP9.05□□□□□ -0.96
TOPBP1-207ENST00000509162 TAF1DQ9H5J8 278 aaPredicted RBP9.05□□□□□ -0.96
TOPBP1-207ENST00000509162 ZNRF3Q9ULT6 936 aa9.05□□□□□ -0.96
TOPBP1-207ENST00000509162 PCNTO95613 3336 aa9.05□□□□□ -0.96
TOPBP1-207ENST00000509162 ZNF804BA4D1E1 1349 aa9.05□□□□□ -0.96
TOPBP1-207ENST00000509162 ASTN2O75129 1339 aaPredicted RBP9.05□□□□□ -0.96
TOPBP1-207ENST00000509162 KDM2BQ8NHM5 1336 aa9.05□□□□□ -0.96
TOPBP1-207ENST00000509162 HSP90B1P14625 803 aaKnown RBP9.04□□□□□ -0.96
TOPBP1-207ENST00000509162 HIRAP54198 1017 aaPredicted RBP9.04□□□□□ -0.96
TOPBP1-207ENST00000509162 LSM11P83369 360 aaKnown RBP eCLIP9.04□□□□□ -0.96
TOPBP1-207ENST00000509162 FMR1Q06787 632 aaKnown RBP eCLIP9.04□□□□□ -0.96
TOPBP1-207ENST00000509162 WASHC4Q2M389 1173 aa9.04□□□□□ -0.96
TOPBP1-207ENST00000509162 C15orf52Q6ZUT6 534 aaKnown RBP9.04□□□□□ -0.96
TOPBP1-207ENST00000509162 GPC2Q8N158 579 aa9.04□□□□□ -0.96
TOPBP1-207ENST00000509162 CERS5Q8N5B7 392 aa9.04□□□□□ -0.96
TOPBP1-207ENST00000509162 SUPT20HQ8NEM7 779 aa9.04□□□□□ -0.96
TOPBP1-207ENST00000509162 GMLQ99445 158 aa9.04□□□□□ -0.96
TOPBP1-207ENST00000509162 ANKIB1Q9P2G1 1089 aa9.04□□□□□ -0.96
TOPBP1-207ENST00000509162 GJA3Q9Y6H8 435 aa9.04□□□□□ -0.96
TOPBP1-207ENST00000509162 EYA2O00167 538 aa9.03□□□□□ -0.96
TOPBP1-207ENST00000509162 C1QTNF8P60827 252 aa9.03□□□□□ -0.96
TOPBP1-207ENST00000509162 GRIK5Q16478 980 aa9.03□□□□□ -0.96
TOPBP1-207ENST00000509162 CCDC57Q2TAC2 916 aa9.03□□□□□ -0.96
TOPBP1-207ENST00000509162 DACT2Q5SW24 774 aa9.03□□□□□ -0.96
TOPBP1-207ENST00000509162 RBM26Q5T8P6 1007 aaKnown RBP9.03□□□□□ -0.96
TOPBP1-207ENST00000509162 CEP85Q6P2H3 762 aa9.03□□□□□ -0.96
TOPBP1-207ENST00000509162 DLK2Q6UY11 383 aa9.03□□□□□ -0.96
TOPBP1-207ENST00000509162 LDHAL6AQ6ZMR3 332 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms