RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 WNT10BO00744 389 aa23.27■■□□□ 1.32
UBE3D-207ENST00000509102 IFIT1P09914 478 aaKnown RBP23.27■■□□□ 1.32
UBE3D-207ENST00000509102 PUM3Q15397 648 aaKnown RBP23.27■■□□□ 1.32
UBE3D-207ENST00000509102 DLGAP5Q15398 846 aa23.27■■□□□ 1.32
UBE3D-207ENST00000509102 NBPF9Q3BBW0 867 aa23.27■■□□□ 1.32
UBE3D-207ENST00000509102 CDCA5Q96FF9 252 aa23.27■■□□□ 1.32
UBE3D-207ENST00000509102 FBXO3Q9UK99 471 aa23.27■■□□□ 1.32
UBE3D-207ENST00000509102 LRRFIP2Q9Y608 721 aaKnown RBP23.27■■□□□ 1.32
UBE3D-207ENST00000509102 MYO1BO43795 1136 aa23.26■■□□□ 1.31
UBE3D-207ENST00000509102 BCAR3O75815 825 aa23.26■■□□□ 1.31
UBE3D-207ENST00000509102 MAP2K2P36507 400 aa23.26■■□□□ 1.31
UBE3D-207ENST00000509102 APOBEC3FQ8IUX4 373 aaKnown RBP23.26■■□□□ 1.31
UBE3D-207ENST00000509102 FAM84BQ96KN1 310 aaPredicted RBP23.26■■□□□ 1.31
UBE3D-207ENST00000509102 POLR2AP24928 1970 aaKnown RBP23.25■■□□□ 1.31
UBE3D-207ENST00000509102 ZNF646O15015 1829 aaPredicted RBP23.25■■□□□ 1.31
UBE3D-207ENST00000509102 F8W031 263 aaPredicted RBP23.25■■□□□ 1.31
UBE3D-207ENST00000509102 TRIM27P14373 513 aa23.25■■□□□ 1.31
UBE3D-207ENST00000509102 NF2P35240 595 aa23.25■■□□□ 1.31
UBE3D-207ENST00000509102 PTPN12Q05209 780 aaKnown RBP23.25■■□□□ 1.31
UBE3D-207ENST00000509102 ZKSCAN2Q63HK3 967 aa23.25■■□□□ 1.31
UBE3D-207ENST00000509102 DLK2Q6UY11 383 aa23.25■■□□□ 1.31
UBE3D-207ENST00000509102 TDRD7Q8NHU6 1098 aaKnown RBP23.25■■□□□ 1.31
UBE3D-207ENST00000509102 MEIS3Q99687 375 aa23.25■■□□□ 1.31
UBE3D-207ENST00000509102 FAM205AQ6ZU69 1335 aa23.25■■□□□ 1.31
UBE3D-207ENST00000509102 CTCFP49711 727 aaPredicted RBP23.24■■□□□ 1.31
UBE3D-207ENST00000509102 MFSD14BQ5SR56 506 aa23.24■■□□□ 1.31
UBE3D-207ENST00000509102 CERS5Q8N5B7 392 aa23.24■■□□□ 1.31
UBE3D-207ENST00000509102 VGLL2Q8N8G2 317 aa23.24■■□□□ 1.31
UBE3D-207ENST00000509102 WBP1LQ9NX94 342 aa23.24■■□□□ 1.31
UBE3D-207ENST00000509102 JAG2Q9Y219 1238 aa23.24■■□□□ 1.31
UBE3D-207ENST00000509102 CIAO1O76071 339 aa23.23■■□□□ 1.31
UBE3D-207ENST00000509102 SLC5A1P13866 664 aa23.23■■□□□ 1.31
UBE3D-207ENST00000509102 RFX5P48382 616 aaPredicted RBP23.23■■□□□ 1.31
UBE3D-207ENST00000509102 RBM5P52756 815 aaKnown RBP eCLIP23.23■■□□□ 1.31
UBE3D-207ENST00000509102 FKBP1BP68106 108 aa23.23■■□□□ 1.31
UBE3D-207ENST00000509102 SIL1Q9H173 461 aa23.23■■□□□ 1.31
UBE3D-207ENST00000509102 NOGQ13253 232 aa23.22■■□□□ 1.31
UBE3D-207ENST00000509102 MAPK8IP2Q13387 824 aaPredicted RBP23.22■■□□□ 1.31
UBE3D-207ENST00000509102 RGMBQ6NW40 437 aa23.22■■□□□ 1.31
UBE3D-207ENST00000509102 FBXO33Q7Z6M2 555 aa23.22■■□□□ 1.31
UBE3D-207ENST00000509102 MTMR14Q8NCE2 650 aa23.22■■□□□ 1.31
UBE3D-207ENST00000509102 TBC1D22AQ8WUA7 517 aa23.22■■□□□ 1.31
UBE3D-207ENST00000509102 LPIN2Q92539 896 aa23.22■■□□□ 1.31
UBE3D-207ENST00000509102 CCDC102AQ96A19 550 aa23.22■■□□□ 1.31
UBE3D-207ENST00000509102 CLUAP1Q96AJ1 413 aa23.22■■□□□ 1.31
UBE3D-207ENST00000509102 CEP126Q9P2H0 1117 aa23.22■■□□□ 1.31
UBE3D-207ENST00000509102 FOXN1O15353 648 aa23.21■■□□□ 1.31
UBE3D-207ENST00000509102 FTSJ3Q8IY81 847 aaKnown RBP23.21■■□□□ 1.31
UBE3D-207ENST00000509102 IL15P40933 162 aaPredicted RBP23.2■■□□□ 1.3
UBE3D-207ENST00000509102 ZNF157P51786 506 aaPredicted RBP23.2■■□□□ 1.3
UBE3D-207ENST00000509102 CFAP100Q494V2 611 aa23.2■■□□□ 1.3
UBE3D-207ENST00000509102 THSD7BQ9C0I4 1608 aa23.19■■□□□ 1.3
UBE3D-207ENST00000509102 AOC2O75106 756 aa23.19■■□□□ 1.3
UBE3D-207ENST00000509102 GNAI2P04899 355 aa23.19■■□□□ 1.3
UBE3D-207ENST00000509102 CHAF1AQ13111 956 aaPredicted RBP23.19■■□□□ 1.3
UBE3D-207ENST00000509102 TTLL12Q14166 644 aaPredicted RBP23.19■■□□□ 1.3
UBE3D-207ENST00000509102 COL13A1Q5TAT6 717 aaPredicted RBP23.19■■□□□ 1.3
UBE3D-207ENST00000509102 ZBED3Q96IU2 234 aaPredicted RBP23.19■■□□□ 1.3
UBE3D-207ENST00000509102 TTF2Q9UNY4 1162 aaKnown RBP23.19■■□□□ 1.3
UBE3D-207ENST00000509102 IQSEC3Q9UPP2 1182 aaPredicted RBP23.19■■□□□ 1.3
UBE3D-207ENST00000509102 SPDYE2BA6NHP3 402 aa23.18■■□□□ 1.3
UBE3D-207ENST00000509102 SRGAP3O43295 1099 aa23.18■■□□□ 1.3
UBE3D-207ENST00000509102 SPDYE6P0CI01 402 aa23.18■■□□□ 1.3
UBE3D-207ENST00000509102 FGFR2P21802 821 aa23.18■■□□□ 1.3
UBE3D-207ENST00000509102 BCAMP50895 628 aa23.18■■□□□ 1.3
UBE3D-207ENST00000509102 ATP2B3Q16720 1220 aa23.18■■□□□ 1.3
UBE3D-207ENST00000509102 IFFO2Q5TF58 517 aa23.18■■□□□ 1.3
UBE3D-207ENST00000509102 ATG9AQ7Z3C6 839 aa23.18■■□□□ 1.3
UBE3D-207ENST00000509102 COPRSQ9NQ92 184 aa23.18■■□□□ 1.3
UBE3D-207ENST00000509102 SERPINA10Q9UK55 444 aa23.18■■□□□ 1.3
UBE3D-207ENST00000509102 SCAF8Q9UPN6 1271 aaKnown RBP23.18■■□□□ 1.3
UBE3D-207ENST00000509102 COL1A1P02452 1464 aaPredicted RBP23.17■■□□□ 1.3
UBE3D-207ENST00000509102 CA12O43570 354 aa23.17■■□□□ 1.3
UBE3D-207ENST00000509102 GNL3LQ9NVN8 582 aaKnown RBP23.17■■□□□ 1.3
UBE3D-207ENST00000509102 PAPPA2Q9BXP8 1791 aa23.17■■□□□ 1.3
UBE3D-207ENST00000509102 TNS4Q8IZW8 715 aa23.16■■□□□ 1.3
UBE3D-207ENST00000509102 VEZTQ9HBM0 779 aa23.16■■□□□ 1.3
UBE3D-207ENST00000509102 PRDM10Q9NQV6 1147 aa23.16■■□□□ 1.3
UBE3D-207ENST00000509102 PPP2R3BQ9Y5P8 575 aa23.16■■□□□ 1.3
UBE3D-207ENST00000509102 MTX1Q13505 466 aa23.15■■□□□ 1.3
UBE3D-207ENST00000509102 TNFAIP1Q13829 316 aa23.15■■□□□ 1.3
UBE3D-207ENST00000509102 PRAMEF18Q5VWM3 479 aa23.15■■□□□ 1.3
UBE3D-207ENST00000509102 TMEM57Q8N5G2 664 aa23.15■■□□□ 1.3
UBE3D-207ENST00000509102 DEFB129Q9H1M3 183 aa23.15■■□□□ 1.3
UBE3D-207ENST00000509102 PA2G4Q9UQ80 394 aaKnown RBP23.15■■□□□ 1.3
UBE3D-207ENST00000509102 MAST3O60307 1309 aa23.14■■□□□ 1.3
UBE3D-207ENST00000509102 ARMC9Q7Z3E5 817 aa23.14■■□□□ 1.29
UBE3D-207ENST00000509102 DZIP1LQ8IYY4 767 aaKnown RBP23.14■■□□□ 1.29
UBE3D-207ENST00000509102 WDR66Q8TBY9 1149 aa23.14■■□□□ 1.29
UBE3D-207ENST00000509102 TNNQ9UQP3 1299 aa23.14■■□□□ 1.29
UBE3D-207ENST00000509102 SUGT1Q9Y2Z0 365 aa23.14■■□□□ 1.29
UBE3D-207ENST00000509102 CLRN2A0PK11 232 aa23.13■■□□□ 1.29
UBE3D-207ENST00000509102 LBX1P52954 281 aa23.13■■□□□ 1.29
UBE3D-207ENST00000509102 PRMT6Q96LA8 375 aaPredicted RBP23.13■■□□□ 1.29
UBE3D-207ENST00000509102 AKAP2Q9Y2D5 859 aa23.13■■□□□ 1.29
UBE3D-207ENST00000509102 ARAP2Q8WZ64 1704 aa23.13■■□□□ 1.29
UBE3D-207ENST00000509102 CRKP46108 304 aa23.12■■□□□ 1.29
UBE3D-207ENST00000509102 HDLBPQ00341 1268 aaKnown RBP23.12■■□□□ 1.29
UBE3D-207ENST00000509102 SUPT20HL1Q3ZLR7 823 aa23.12■■□□□ 1.29
UBE3D-207ENST00000509102 ITPRIPQ8IWB1 547 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms