RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 ECM29Q5VYK3 1845 aa18.57■□□□□ 0.56
UBE2D3-228ENST00000508974 ARAP2Q8WZ64 1704 aa18.57■□□□□ 0.56
UBE2D3-228ENST00000508974 KIF16BQ96L93 1317 aa18.56■□□□□ 0.56
UBE2D3-228ENST00000508974 IL1R1P14778 569 aa18.56■□□□□ 0.56
UBE2D3-228ENST00000508974 UBE4AQ14139 1066 aa18.56■□□□□ 0.56
UBE2D3-228ENST00000508974 PRAMEF18Q5VWM3 479 aa18.56■□□□□ 0.56
UBE2D3-228ENST00000508974 C2orf69Q8N8R5 385 aa18.56■□□□□ 0.56
UBE2D3-228ENST00000508974 FRAT1Q92837 279 aaPredicted RBP18.56■□□□□ 0.56
UBE2D3-228ENST00000508974 WBP1LQ9NX94 342 aa18.56■□□□□ 0.56
UBE2D3-228ENST00000508974 HDAC9Q9UKV0 1011 aa18.56■□□□□ 0.56
UBE2D3-228ENST00000508974 IQSEC3Q9UPP2 1182 aaPredicted RBP18.56■□□□□ 0.56
UBE2D3-228ENST00000508974 TNNQ9UQP3 1299 aa18.56■□□□□ 0.56
UBE2D3-228ENST00000508974 WNT10BO00744 389 aa18.55■□□□□ 0.56
UBE2D3-228ENST00000508974 BCAR3O75815 825 aa18.55■□□□□ 0.56
UBE2D3-228ENST00000508974 MYH13Q9UKX3 1938 aa18.55■□□□□ 0.56
UBE2D3-228ENST00000508974 PITPNM2Q9BZ72 1349 aa18.54■□□□□ 0.56
UBE2D3-228ENST00000508974 HIBADHP31937 336 aaKnown RBP18.54■□□□□ 0.56
UBE2D3-228ENST00000508974 BRPF1P55201 1214 aaPredicted RBP18.54■□□□□ 0.56
UBE2D3-228ENST00000508974 MAP2K1Q02750 393 aaPredicted RBP18.54■□□□□ 0.56
UBE2D3-228ENST00000508974 FAM84BQ96KN1 310 aaPredicted RBP18.54■□□□□ 0.56
UBE2D3-228ENST00000508974 MEIS3Q99687 375 aa18.54■□□□□ 0.56
UBE2D3-228ENST00000508974 SIL1Q9H173 461 aa18.54■□□□□ 0.56
UBE2D3-228ENST00000508974 PCDHAC2Q9Y5I4 1007 aa18.54■□□□□ 0.56
UBE2D3-228ENST00000508974 LRRFIP2Q9Y608 721 aaKnown RBP18.54■□□□□ 0.56
UBE2D3-228ENST00000508974 VPS37DQ86XT2 251 aa18.53■□□□□ 0.56
UBE2D3-228ENST00000508974 FOXD4L1Q9NU39 408 aa18.53■□□□□ 0.56
UBE2D3-228ENST00000508974 PDE8BO95263 885 aa18.52■□□□□ 0.56
UBE2D3-228ENST00000508974 RFX5P48382 616 aaPredicted RBP18.52■□□□□ 0.56
UBE2D3-228ENST00000508974 CTCFP49711 727 aaPredicted RBP18.52■□□□□ 0.56
UBE2D3-228ENST00000508974 LBX1P52954 281 aa18.52■□□□□ 0.56
UBE2D3-228ENST00000508974 DLGAP5Q15398 846 aa18.52■□□□□ 0.56
UBE2D3-228ENST00000508974 MOB2Q70IA6 237 aa18.52■□□□□ 0.56
UBE2D3-228ENST00000508974 TNS4Q8IZW8 715 aa18.52■□□□□ 0.56
UBE2D3-228ENST00000508974 VGLL2Q8N8G2 317 aa18.52■□□□□ 0.56
UBE2D3-228ENST00000508974 CLUAP1Q96AJ1 413 aa18.52■□□□□ 0.56
UBE2D3-228ENST00000508974 HHIPL1Q96JK4 782 aa18.52■□□□□ 0.56
UBE2D3-228ENST00000508974 TSKSQ9UJT2 592 aa18.52■□□□□ 0.56
UBE2D3-228ENST00000508974 PAPPA2Q9BXP8 1791 aa18.52■□□□□ 0.55
UBE2D3-228ENST00000508974 RBM5P52756 815 aaKnown RBP eCLIP18.51■□□□□ 0.55
UBE2D3-228ENST00000508974 PTPN12Q05209 780 aaKnown RBP18.51■□□□□ 0.55
UBE2D3-228ENST00000508974 CHAF1AQ13111 956 aaPredicted RBP18.51■□□□□ 0.55
UBE2D3-228ENST00000508974 RGMBQ6NW40 437 aa18.51■□□□□ 0.55
UBE2D3-228ENST00000508974 TDRD7Q8NHU6 1098 aaKnown RBP18.51■□□□□ 0.55
UBE2D3-228ENST00000508974 ZIC5Q96T25 663 aa18.51■□□□□ 0.55
UBE2D3-228ENST00000508974 BEGAINQ9BUH8 593 aa18.51■□□□□ 0.55
UBE2D3-228ENST00000508974 EYA2O00167 538 aa18.5■□□□□ 0.55
UBE2D3-228ENST00000508974 FRAT2O75474 233 aaPredicted RBP18.5■□□□□ 0.55
UBE2D3-228ENST00000508974 TRIM27P14373 513 aa18.5■□□□□ 0.55
UBE2D3-228ENST00000508974 ZNF157P51786 506 aaPredicted RBP18.5■□□□□ 0.55
UBE2D3-228ENST00000508974 CFAP100Q494V2 611 aa18.5■□□□□ 0.55
UBE2D3-228ENST00000508974 CAVIN4Q5BKX8 364 aa18.5■□□□□ 0.55
UBE2D3-228ENST00000508974 MFSD14BQ5SR56 506 aa18.5■□□□□ 0.55
UBE2D3-228ENST00000508974 ARHGAP45Q92619 1136 aa18.5■□□□□ 0.55
UBE2D3-228ENST00000508974 CLRN2A0PK11 232 aa18.49■□□□□ 0.55
UBE2D3-228ENST00000508974 MYCNP04198 464 aaPredicted RBP18.49■□□□□ 0.55
UBE2D3-228ENST00000508974 HSPA8P11142 646 aaKnown RBP18.49■□□□□ 0.55
UBE2D3-228ENST00000508974 MAP2K2P36507 400 aa18.49■□□□□ 0.55
UBE2D3-228ENST00000508974 BCAMP50895 628 aa18.49■□□□□ 0.55
UBE2D3-228ENST00000508974 PRKG1Q13976 671 aa18.49■□□□□ 0.55
UBE2D3-228ENST00000508974 TTLL12Q14166 644 aaPredicted RBP18.49■□□□□ 0.55
UBE2D3-228ENST00000508974 PUM3Q15397 648 aaKnown RBP18.49■□□□□ 0.55
UBE2D3-228ENST00000508974 INTS3Q68E01 1043 aaKnown RBP18.49■□□□□ 0.55
UBE2D3-228ENST00000508974 ZBED3Q96IU2 234 aaPredicted RBP18.49■□□□□ 0.55
UBE2D3-228ENST00000508974 PA2G4Q9UQ80 394 aaKnown RBP18.49■□□□□ 0.55
UBE2D3-228ENST00000508974 AOX1Q06278 1338 aa18.49■□□□□ 0.55
UBE2D3-228ENST00000508974 FAM205AQ6ZU69 1335 aa18.49■□□□□ 0.55
UBE2D3-228ENST00000508974 IPO8O15397 1037 aaKnown RBP18.48■□□□□ 0.55
UBE2D3-228ENST00000508974 MMP14P50281 582 aa18.48■□□□□ 0.55
UBE2D3-228ENST00000508974 FKBP1AP62942 108 aaKnown RBP18.48■□□□□ 0.55
UBE2D3-228ENST00000508974 ATF7IPQ6VMQ6 1270 aa18.48■□□□□ 0.55
UBE2D3-228ENST00000508974 ATG9AQ7Z3C6 839 aa18.48■□□□□ 0.55
UBE2D3-228ENST00000508974 FBXO33Q7Z6M2 555 aa18.48■□□□□ 0.55
UBE2D3-228ENST00000508974 APOBEC3FQ8IUX4 373 aaKnown RBP18.48■□□□□ 0.55
UBE2D3-228ENST00000508974 TTF2Q9UNY4 1162 aaKnown RBP18.48■□□□□ 0.55
UBE2D3-228ENST00000508974 FAM155AB1AL88 458 aaPredicted RBP18.47■□□□□ 0.55
UBE2D3-228ENST00000508974 UBE2Q2LH0YL09 131 aa18.47■□□□□ 0.55
UBE2D3-228ENST00000508974 ZBTB22O15209 634 aa18.47■□□□□ 0.55
UBE2D3-228ENST00000508974 IFIT1P09914 478 aaKnown RBP18.47■□□□□ 0.55
UBE2D3-228ENST00000508974 NOGQ13253 232 aa18.47■□□□□ 0.55
UBE2D3-228ENST00000508974 PRMT6Q96LA8 375 aaPredicted RBP18.47■□□□□ 0.55
UBE2D3-228ENST00000508974 VEZTQ9HBM0 779 aa18.47■□□□□ 0.55
UBE2D3-228ENST00000508974 SPDYE2BA6NHP3 402 aa18.46■□□□□ 0.55
UBE2D3-228ENST00000508974 SPDYE6P0CI01 402 aa18.46■□□□□ 0.55
UBE2D3-228ENST00000508974 SLC5A1P13866 664 aa18.46■□□□□ 0.55
UBE2D3-228ENST00000508974 FGFR2P21802 821 aa18.46■□□□□ 0.55
UBE2D3-228ENST00000508974 GRIK5Q16478 980 aa18.46■□□□□ 0.55
UBE2D3-228ENST00000508974 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.46■□□□□ 0.55
UBE2D3-228ENST00000508974 FZD1Q9UP38 647 aa18.46■□□□□ 0.55
UBE2D3-228ENST00000508974 MYO1BO43795 1136 aa18.45■□□□□ 0.54
UBE2D3-228ENST00000508974 GNAI3P08754 354 aa18.45■□□□□ 0.54
UBE2D3-228ENST00000508974 NF2P35240 595 aa18.45■□□□□ 0.54
UBE2D3-228ENST00000508974 MTMR14Q8NCE2 650 aa18.45■□□□□ 0.54
UBE2D3-228ENST00000508974 PRDM10Q9NQV6 1147 aa18.45■□□□□ 0.54
UBE2D3-228ENST00000508974 HDAC5Q9UQL6 1122 aa18.45■□□□□ 0.54
UBE2D3-228ENST00000508974 AKAP11Q9UKA4 1901 aa18.45■□□□□ 0.54
UBE2D3-228ENST00000508974 SRGAP3O43295 1099 aa18.44■□□□□ 0.54
UBE2D3-228ENST00000508974 SLC10A3P09131 477 aa18.44■□□□□ 0.54
UBE2D3-228ENST00000508974 FKBP1BP68106 108 aa18.44■□□□□ 0.54
UBE2D3-228ENST00000508974 KIF23Q02241 960 aaPredicted RBP18.44■□□□□ 0.54
UBE2D3-228ENST00000508974 ATP2B3Q16720 1220 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms