RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 ADARB2Q9NS39 739 aaKnown RBP22.46■■□□□ 1.19
NPHP4-210ENST00000506941 PCDHB15Q9Y5E8 787 aa22.46■■□□□ 1.19
NPHP4-210ENST00000506941 PHKA1P46020 1223 aa22.45■■□□□ 1.18
NPHP4-210ENST00000506941 XAGE2Q96GT9 111 aa22.45■■□□□ 1.18
NPHP4-210ENST00000506941 MYO3BQ8WXR4 1341 aa22.45■■□□□ 1.18
NPHP4-210ENST00000506941 ZNF280AP59817 542 aaPredicted RBP22.44■■□□□ 1.18
NPHP4-210ENST00000506941 USP50Q70EL3 339 aaPredicted RBP22.44■■□□□ 1.18
NPHP4-210ENST00000506941 SAMD7Q7Z3H4 446 aa22.44■■□□□ 1.18
NPHP4-210ENST00000506941 PNMA8AQ86V59 439 aaPredicted RBP22.44■■□□□ 1.18
NPHP4-210ENST00000506941 GPR108Q9NPR9 543 aa22.44■■□□□ 1.18
NPHP4-210ENST00000506941 TRPM7Q96QT4 1865 aa22.43■■□□□ 1.18
NPHP4-210ENST00000506941 H7C1D1 291 aa22.43■■□□□ 1.18
NPHP4-210ENST00000506941 HIRAP54198 1017 aaPredicted RBP22.43■■□□□ 1.18
NPHP4-210ENST00000506941 C1QTNF8P60827 252 aa22.43■■□□□ 1.18
NPHP4-210ENST00000506941 TNNI3KQ59H18 835 aa22.43■■□□□ 1.18
NPHP4-210ENST00000506941 LDHDQ86WU2 507 aa22.43■■□□□ 1.18
NPHP4-210ENST00000506941 NEUROD6Q96NK8 337 aa22.43■■□□□ 1.18
NPHP4-210ENST00000506941 FPGT-TNNI3KV9GXZ4 949 aa22.43■■□□□ 1.18
NPHP4-210ENST00000506941 USP17L8P0C7I0 530 aa22.42■■□□□ 1.18
NPHP4-210ENST00000506941 FKBP1AP62942 108 aaKnown RBP22.42■■□□□ 1.18
NPHP4-210ENST00000506941 CHAF1AQ13111 956 aaPredicted RBP22.42■■□□□ 1.18
NPHP4-210ENST00000506941 TBC1D10BQ4KMP7 808 aaPredicted RBP22.42■■□□□ 1.18
NPHP4-210ENST00000506941 CCDC102BQ68D86 513 aa22.42■■□□□ 1.18
NPHP4-210ENST00000506941 KIAA0825Q8IV33 1275 aa22.42■■□□□ 1.18
NPHP4-210ENST00000506941 EXOC6Q8TAG9 804 aa22.42■■□□□ 1.18
NPHP4-210ENST00000506941 FRAT2O75474 233 aaPredicted RBP22.41■■□□□ 1.18
NPHP4-210ENST00000506941 HSP90AB4PQ58FF6 505 aa22.41■■□□□ 1.18
NPHP4-210ENST00000506941 MFSD14BQ5SR56 506 aa22.41■■□□□ 1.18
NPHP4-210ENST00000506941 CHADLQ6NUI6 762 aa22.41■■□□□ 1.18
NPHP4-210ENST00000506941 ERC1Q8IUD2 1116 aa22.41■■□□□ 1.18
NPHP4-210ENST00000506941 SMC1BQ8NDV3 1235 aa22.41■■□□□ 1.18
NPHP4-210ENST00000506941 MYH2Q9UKX2 1941 aa22.4■■□□□ 1.18
NPHP4-210ENST00000506941 APBB1O00213 710 aa22.4■■□□□ 1.18
NPHP4-210ENST00000506941 RHPN1Q8TCX5 695 aa22.4■■□□□ 1.18
NPHP4-210ENST00000506941 EAF2Q96CJ1 260 aaPredicted RBP22.4■■□□□ 1.18
NPHP4-210ENST00000506941 IRX6P78412 446 aaPredicted RBP22.39■■□□□ 1.17
NPHP4-210ENST00000506941 FSTL1Q12841 308 aa22.39■■□□□ 1.17
NPHP4-210ENST00000506941 GRIK5Q16478 980 aa22.39■■□□□ 1.17
NPHP4-210ENST00000506941 KIF4BQ2VIQ3 1234 aa22.39■■□□□ 1.17
NPHP4-210ENST00000506941 RBM26Q5T8P6 1007 aaKnown RBP22.39■■□□□ 1.17
NPHP4-210ENST00000506941 DBNDD2Q9BQY9 259 aa22.39■■□□□ 1.17
NPHP4-210ENST00000506941 MYOZ2Q9NPC6 264 aa22.39■■□□□ 1.17
NPHP4-210ENST00000506941 TLR7Q9NYK1 1049 aaKnown RBP22.39■■□□□ 1.17
NPHP4-210ENST00000506941 CLEC11AQ9Y240 323 aa22.39■■□□□ 1.17
NPHP4-210ENST00000506941 F8W031 263 aaPredicted RBP22.38■■□□□ 1.17
NPHP4-210ENST00000506941 RASGRF1Q13972 1273 aa22.38■■□□□ 1.17
NPHP4-210ENST00000506941 MAP1SQ66K74 1059 aaPredicted RBP22.38■■□□□ 1.17
NPHP4-210ENST00000506941 IL1RAPL2Q9NP60 686 aa22.38■■□□□ 1.17
NPHP4-210ENST00000506941 GNL3LQ9NVN8 582 aaKnown RBP22.38■■□□□ 1.17
NPHP4-210ENST00000506941 DBNLQ9UJU6 430 aaKnown RBP22.38■■□□□ 1.17
NPHP4-210ENST00000506941 ZBTB22O15209 634 aa22.37■■□□□ 1.17
NPHP4-210ENST00000506941 KIF1BPQ96EK5 621 aa22.37■■□□□ 1.17
NPHP4-210ENST00000506941 CCDC8Q9H0W5 538 aaPredicted RBP22.37■■□□□ 1.17
NPHP4-210ENST00000506941 ASTN2O75129 1339 aaPredicted RBP22.36■■□□□ 1.17
NPHP4-210ENST00000506941 SEMA3EO15041 775 aa22.36■■□□□ 1.17
NPHP4-210ENST00000506941 RAB11FIP3O75154 756 aa22.36■■□□□ 1.17
NPHP4-210ENST00000506941 ARID4AP29374 1257 aaPredicted RBP22.36■■□□□ 1.17
NPHP4-210ENST00000506941 GORABQ5T7V8 394 aa22.36■■□□□ 1.17
NPHP4-210ENST00000506941 OGFOD1Q8N543 542 aa22.36■■□□□ 1.17
NPHP4-210ENST00000506941 TBC1D22AQ8WUA7 517 aa22.36■■□□□ 1.17
NPHP4-210ENST00000506941 DCTPP1Q9H773 170 aa22.36■■□□□ 1.17
NPHP4-210ENST00000506941 PGAP2Q9UHJ9 254 aa22.36■■□□□ 1.17
NPHP4-210ENST00000506941 DENND2AQ9ULE3 1009 aa22.36■■□□□ 1.17
NPHP4-210ENST00000506941 DOCK2Q92608 1830 aa22.36■■□□□ 1.17
NPHP4-210ENST00000506941 MAST2Q6P0Q8 1798 aa22.35■■□□□ 1.17
NPHP4-210ENST00000506941 SCARF1Q14162 830 aa22.35■■□□□ 1.17
NPHP4-210ENST00000506941 PI16Q6UXB8 463 aa22.35■■□□□ 1.17
NPHP4-210ENST00000506941 AACSQ86V21 672 aa22.35■■□□□ 1.17
NPHP4-210ENST00000506941 PCDHAC2Q9Y5I4 1007 aa22.35■■□□□ 1.17
NPHP4-210ENST00000506941 PDS5AQ29RF7 1337 aaKnown RBP22.34■■□□□ 1.17
NPHP4-210ENST00000506941 CEP350Q5VT06 3117 aa22.34■■□□□ 1.17
NPHP4-210ENST00000506941 ITGBL1O95965 494 aaPredicted RBP22.34■■□□□ 1.17
NPHP4-210ENST00000506941 AAMPQ13685 434 aa22.34■■□□□ 1.17
NPHP4-210ENST00000506941 WDR66Q8TBY9 1149 aa22.34■■□□□ 1.17
NPHP4-210ENST00000506941 ZC3H15Q8WU90 426 aaKnown RBP22.34■■□□□ 1.17
NPHP4-210ENST00000506941 ZBED3Q96IU2 234 aaPredicted RBP22.34■■□□□ 1.17
NPHP4-210ENST00000506941 HDAC9Q9UKV0 1011 aa22.34■■□□□ 1.17
NPHP4-210ENST00000506941 TTF2Q9UNY4 1162 aaKnown RBP22.34■■□□□ 1.17
NPHP4-210ENST00000506941 MCAMP43121 646 aa22.33■■□□□ 1.17
NPHP4-210ENST00000506941 MMP14P50281 582 aa22.33■■□□□ 1.17
NPHP4-210ENST00000506941 NBPF9Q3BBW0 867 aa22.33■■□□□ 1.17
NPHP4-210ENST00000506941 CNTROBQ8N137 903 aa22.33■■□□□ 1.17
NPHP4-210ENST00000506941 HMG20BQ9P0W2 317 aa22.33■■□□□ 1.17
NPHP4-210ENST00000506941 SALL1Q9NSC2 1324 aa22.32■■□□□ 1.16
NPHP4-210ENST00000506941 WNT10BO00744 389 aa22.32■■□□□ 1.16
NPHP4-210ENST00000506941 SMARCA5O60264 1052 aaPredicted RBP22.32■■□□□ 1.16
NPHP4-210ENST00000506941 AOX1Q06278 1338 aa22.31■■□□□ 1.16
NPHP4-210ENST00000506941 PASKQ96RG2 1323 aa22.31■■□□□ 1.16
NPHP4-210ENST00000506941 TTC39AQ5SRH9 613 aa22.31■■□□□ 1.16
NPHP4-210ENST00000506941 CLASRPQ8N2M8 674 aaKnown RBP22.31■■□□□ 1.16
NPHP4-210ENST00000506941 SPATA5Q8NB90 893 aa22.31■■□□□ 1.16
NPHP4-210ENST00000506941 MTMR14Q8NCE2 650 aa22.31■■□□□ 1.16
NPHP4-210ENST00000506941 LRRCC1Q9C099 1032 aa22.31■■□□□ 1.16
NPHP4-210ENST00000506941 BCL11AQ9H165 835 aa22.31■■□□□ 1.16
NPHP4-210ENST00000506941 GGA3Q9NZ52 723 aa22.31■■□□□ 1.16
NPHP4-210ENST00000506941 MYH7P12883 1935 aa22.3■■□□□ 1.16
NPHP4-210ENST00000506941 UQCRFS1P1P0C7P4 283 aa22.3■■□□□ 1.16
NPHP4-210ENST00000506941 PRDX5P30044 214 aa22.3■■□□□ 1.16
NPHP4-210ENST00000506941 FMR1Q06787 632 aaKnown RBP eCLIP22.3■■□□□ 1.16
NPHP4-210ENST00000506941 HDAC1Q13547 482 aaPredicted RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms