RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 ZNF853P0CG23 659 aa7.12□□□□□ -1.27
CLDND1-213ENST00000506927 RASA1P20936 1047 aa7.12□□□□□ -1.27
CLDND1-213ENST00000506927 CCT4P50991 539 aaKnown RBP7.12□□□□□ -1.27
CLDND1-213ENST00000506927 IDI1Q13907 227 aa7.12□□□□□ -1.27
CLDND1-213ENST00000506927 MTFR1Q15390 333 aa7.12□□□□□ -1.27
CLDND1-213ENST00000506927 RIPOR1Q6ZS17 1223 aa7.12□□□□□ -1.27
CLDND1-213ENST00000506927 C14orf37Q86TY3 774 aa7.12□□□□□ -1.27
CLDND1-213ENST00000506927 FAM184AQ8NB25 1140 aa7.12□□□□□ -1.27
CLDND1-213ENST00000506927 STK26Q9P289 416 aa7.12□□□□□ -1.27
CLDND1-213ENST00000506927 IQSEC3Q9UPP2 1182 aaPredicted RBP7.12□□□□□ -1.27
CLDND1-213ENST00000506927 ATP6V1DQ9Y5K8 247 aa7.12□□□□□ -1.27
CLDND1-213ENST00000506927 TMEM131LA2VDJ0 1609 aa7.12□□□□□ -1.27
CLDND1-213ENST00000506927 CDK2AP1O14519 115 aa7.11□□□□□ -1.27
CLDND1-213ENST00000506927 HTATSF1O43719 755 aaKnown RBP7.11□□□□□ -1.27
CLDND1-213ENST00000506927 DKK1O94907 266 aa7.11□□□□□ -1.27
CLDND1-213ENST00000506927 TTC22Q5TAA0 569 aa7.11□□□□□ -1.27
CLDND1-213ENST00000506927 SV2AQ7L0J3 742 aa7.11□□□□□ -1.27
CLDND1-213ENST00000506927 ANKRD44Q8N8A2 993 aa7.11□□□□□ -1.27
CLDND1-213ENST00000506927 INTS4Q96HW7 963 aaKnown RBP7.11□□□□□ -1.27
CLDND1-213ENST00000506927 PDCL3Q9H2J4 239 aa7.11□□□□□ -1.27
CLDND1-213ENST00000506927 BABAM1Q9NWV8 329 aa7.11□□□□□ -1.27
CLDND1-213ENST00000506927 CABP1Q9NZU7 370 aa7.11□□□□□ -1.27
CLDND1-213ENST00000506927 CCDC39Q9UFE4 941 aa7.11□□□□□ -1.27
CLDND1-213ENST00000506927 USP3Q9Y6I4 520 aa7.11□□□□□ -1.27
CLDND1-213ENST00000506927 PREX1Q8TCU6 1659 aa7.1□□□□□ -1.27
CLDND1-213ENST00000506927 TTC21BQ7Z4L5 1316 aa7.1□□□□□ -1.27
CLDND1-213ENST00000506927 ALKQ9UM73 1620 aa7.1□□□□□ -1.27
CLDND1-213ENST00000506927 CFAP65Q6ZU64 1925 aaKnown RBP7.1□□□□□ -1.27
CLDND1-213ENST00000506927 SFI1A8K8P3 1242 aa7.1□□□□□ -1.27
CLDND1-213ENST00000506927 BAG4O95429 457 aaKnown RBP7.1□□□□□ -1.27
CLDND1-213ENST00000506927 F11P03951 625 aa7.1□□□□□ -1.27
CLDND1-213ENST00000506927 TPM3P06753 285 aa7.1□□□□□ -1.27
CLDND1-213ENST00000506927 GNAI3P08754 354 aa7.1□□□□□ -1.27
CLDND1-213ENST00000506927 RFX1P22670 979 aa7.1□□□□□ -1.27
CLDND1-213ENST00000506927 DBN1Q16643 649 aa7.1□□□□□ -1.27
CLDND1-213ENST00000506927 CRTC2Q53ET0 693 aaPredicted RBP7.1□□□□□ -1.27
CLDND1-213ENST00000506927 TNS4Q8IZW8 715 aa7.1□□□□□ -1.27
CLDND1-213ENST00000506927 SIX5Q8N196 739 aa7.1□□□□□ -1.27
CLDND1-213ENST00000506927 NIFKQ9BYG3 293 aaKnown RBP7.1□□□□□ -1.27
CLDND1-213ENST00000506927 VRTNQ9H8Y1 702 aa7.1□□□□□ -1.27
CLDND1-213ENST00000506927 POLKQ9UBT6 870 aa7.1□□□□□ -1.27
CLDND1-213ENST00000506927 STK17AQ9UEE5 414 aa7.1□□□□□ -1.27
CLDND1-213ENST00000506927 SSH2Q76I76 1423 aa7.1□□□□□ -1.27
CLDND1-213ENST00000506927 ARHGEF10O15013 1369 aa7.09□□□□□ -1.27
CLDND1-213ENST00000506927 AOX1Q06278 1338 aa7.09□□□□□ -1.27
CLDND1-213ENST00000506927 DIP2CQ9Y2E4 1556 aa7.09□□□□□ -1.27
CLDND1-213ENST00000506927 A0A1B0GTH6 734 aa7.09□□□□□ -1.27
CLDND1-213ENST00000506927 FAM181BA6NEQ2 426 aa7.09□□□□□ -1.27
CLDND1-213ENST00000506927 IL13P35225 146 aa7.09□□□□□ -1.27
CLDND1-213ENST00000506927 PLA2G4AP47712 749 aa7.09□□□□□ -1.27
CLDND1-213ENST00000506927 EPHA4P54764 986 aa7.09□□□□□ -1.27
CLDND1-213ENST00000506927 UVSSAQ2YD98 709 aa7.09□□□□□ -1.27
CLDND1-213ENST00000506927 LARP1Q6PKG0 1096 aaKnown RBP7.09□□□□□ -1.27
CLDND1-213ENST00000506927 TRIM22Q8IYM9 498 aa7.09□□□□□ -1.27
CLDND1-213ENST00000506927 ZNF295-AS1Q8N0V1 137 aa7.09□□□□□ -1.27
CLDND1-213ENST00000506927 RTF1Q92541 710 aaKnown RBP7.09□□□□□ -1.27
CLDND1-213ENST00000506927 STK31Q9BXU1 1019 aa7.09□□□□□ -1.27
CLDND1-213ENST00000506927 USP26Q9BXU7 913 aa7.09□□□□□ -1.27
CLDND1-213ENST00000506927 GPAMQ9HCL2 828 aa7.09□□□□□ -1.27
CLDND1-213ENST00000506927 RRAGDQ9NQL2 400 aaPredicted RBP7.09□□□□□ -1.27
CLDND1-213ENST00000506927 SCHIP1Q9P0W5 487 aaPredicted RBP7.09□□□□□ -1.27
CLDND1-213ENST00000506927 LRRC7Q96NW7 1537 aa7.09□□□□□ -1.27
CLDND1-213ENST00000506927 AGLP35573 1532 aa7.08□□□□□ -1.28
CLDND1-213ENST00000506927 H7C1W4 665 aa7.08□□□□□ -1.28
CLDND1-213ENST00000506927 OFD1O75665 1012 aa7.08□□□□□ -1.28
CLDND1-213ENST00000506927 MSX1P28360 303 aa7.08□□□□□ -1.28
CLDND1-213ENST00000506927 HMGN5P82970 282 aaKnown RBP7.08□□□□□ -1.28
CLDND1-213ENST00000506927 PTK7Q13308 1070 aa7.08□□□□□ -1.28
CLDND1-213ENST00000506927 HSP90AB4PQ58FF6 505 aa7.08□□□□□ -1.28
CLDND1-213ENST00000506927 TBCELQ5QJ74 424 aa7.08□□□□□ -1.28
CLDND1-213ENST00000506927 ZNF837Q96EG3 531 aaPredicted RBP7.08□□□□□ -1.28
CLDND1-213ENST00000506927 MBIPQ9NS73 344 aa7.08□□□□□ -1.28
CLDND1-213ENST00000506927 CD163L1Q9NR16 1453 aa7.08□□□□□ -1.28
CLDND1-213ENST00000506927 RIMS2Q9UQ26 1411 aa7.08□□□□□ -1.28
CLDND1-213ENST00000506927 MAP2P11137 1827 aaKnown RBP7.08□□□□□ -1.28
CLDND1-213ENST00000506927 FAM196BA6NMK8 535 aa7.07□□□□□ -1.28
CLDND1-213ENST00000506927 USP17L15C9J2P7 530 aa7.07□□□□□ -1.28
CLDND1-213ENST00000506927 USP17L10C9JJH3 530 aa7.07□□□□□ -1.28
CLDND1-213ENST00000506927 USP17L13C9JLJ4 530 aa7.07□□□□□ -1.28
CLDND1-213ENST00000506927 USP17L12C9JPN9 530 aa7.07□□□□□ -1.28
CLDND1-213ENST00000506927 USP17L11C9JVI0 530 aa7.07□□□□□ -1.28
CLDND1-213ENST00000506927 USP17L21D6R901 530 aa7.07□□□□□ -1.28
CLDND1-213ENST00000506927 USP17L18D6R9N7 530 aa7.07□□□□□ -1.28
CLDND1-213ENST00000506927 USP17L22D6RA61 530 aa7.07□□□□□ -1.28
CLDND1-213ENST00000506927 USP17L17D6RBQ6 530 aa7.07□□□□□ -1.28
CLDND1-213ENST00000506927 USP17L19D6RCP7 530 aa7.07□□□□□ -1.28
CLDND1-213ENST00000506927 USP17L20D6RJB6 530 aa7.07□□□□□ -1.28
CLDND1-213ENST00000506927 ZNF500O60304 480 aaPredicted RBP7.07□□□□□ -1.28
CLDND1-213ENST00000506927 RAB11FIP3O75154 756 aa7.07□□□□□ -1.28
CLDND1-213ENST00000506927 GNAI2P04899 355 aa7.07□□□□□ -1.28
CLDND1-213ENST00000506927 FOXK2Q01167 660 aa7.07□□□□□ -1.28
CLDND1-213ENST00000506927 KRT76Q01546 638 aa7.07□□□□□ -1.28
CLDND1-213ENST00000506927 KIAA2012Q0VF49 1180 aa7.07□□□□□ -1.28
CLDND1-213ENST00000506927 USP17L24Q0WX57 530 aa7.07□□□□□ -1.28
CLDND1-213ENST00000506927 SAFB2Q14151 953 aaKnown RBP eCLIP7.07□□□□□ -1.28
CLDND1-213ENST00000506927 TSEN2Q8NCE0 465 aaKnown RBP7.07□□□□□ -1.28
CLDND1-213ENST00000506927 GAS2L2Q8NHY3 880 aa7.07□□□□□ -1.28
CLDND1-213ENST00000506927 AIDAQ96BJ3 306 aa7.07□□□□□ -1.28
CLDND1-213ENST00000506927 GMCL1Q96IK5 515 aa7.07□□□□□ -1.28
CLDND1-213ENST00000506927 COL25A1Q9BXS0 654 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms