RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 IQSEC3Q9UPP2 1182 aaPredicted RBP15.76■□□□□ 0.11
TCOF1-210ENST00000506767 COL1A1P02452 1464 aaPredicted RBP15.76■□□□□ 0.11
TCOF1-210ENST00000506767 MYH13Q9UKX3 1938 aa15.76■□□□□ 0.11
TCOF1-210ENST00000506767 PDS5AQ29RF7 1337 aaKnown RBP15.75■□□□□ 0.11
TCOF1-210ENST00000506767 UQCRFS1P1P0C7P4 283 aa15.75■□□□□ 0.11
TCOF1-210ENST00000506767 FKBP1AP62942 108 aaKnown RBP15.75■□□□□ 0.11
TCOF1-210ENST00000506767 DENND2AQ9ULE3 1009 aa15.75■□□□□ 0.11
TCOF1-210ENST00000506767 AKAP11Q9UKA4 1901 aa15.74■□□□□ 0.11
TCOF1-210ENST00000506767 WDR90Q96KV7 1748 aa15.74■□□□□ 0.11
TCOF1-210ENST00000506767 SALL3Q9BXA9 1300 aa15.74■□□□□ 0.11
TCOF1-210ENST00000506767 RASGRF1Q13972 1273 aa15.74■□□□□ 0.11
TCOF1-210ENST00000506767 B4GALNT3Q6L9W6 998 aa15.74■□□□□ 0.11
TCOF1-210ENST00000506767 RSBN1LQ6PCB5 846 aaPredicted RBP15.74■□□□□ 0.11
TCOF1-210ENST00000506767 CHD1LQ86WJ1 897 aa15.74■□□□□ 0.11
TCOF1-210ENST00000506767 C16orf71Q8IYS4 520 aaPredicted RBP15.74■□□□□ 0.11
TCOF1-210ENST00000506767 L3MBTL3Q96JM7 780 aaPredicted RBP15.74■□□□□ 0.11
TCOF1-210ENST00000506767 GMLQ99445 158 aa15.74■□□□□ 0.11
TCOF1-210ENST00000506767 PPP4R2Q9NY27 417 aa15.74■□□□□ 0.11
TCOF1-210ENST00000506767 FRAT2O75474 233 aaPredicted RBP15.73■□□□□ 0.11
TCOF1-210ENST00000506767 RPS12P25398 132 aaKnown RBP15.73■□□□□ 0.11
TCOF1-210ENST00000506767 MCAMP43121 646 aa15.73■□□□□ 0.11
TCOF1-210ENST00000506767 SCARF1Q14162 830 aa15.73■□□□□ 0.11
TCOF1-210ENST00000506767 TTC39AQ5SRH9 613 aa15.73■□□□□ 0.11
TCOF1-210ENST00000506767 CERS5Q8N5B7 392 aa15.73■□□□□ 0.11
TCOF1-210ENST00000506767 AGBL3Q8NEM8 1001 aa15.73■□□□□ 0.11
TCOF1-210ENST00000506767 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.73■□□□□ 0.11
TCOF1-210ENST00000506767 HMG20BQ9P0W2 317 aa15.73■□□□□ 0.11
TCOF1-210ENST00000506767 ZBTB12Q9Y330 459 aaPredicted RBP15.73■□□□□ 0.11
TCOF1-210ENST00000506767 GJA3Q9Y6H8 435 aa15.73■□□□□ 0.11
TCOF1-210ENST00000506767 MYO3BQ8WXR4 1341 aa15.72■□□□□ 0.11
TCOF1-210ENST00000506767 SALL1Q9NSC2 1324 aa15.72■□□□□ 0.11
TCOF1-210ENST00000506767 POTECB2RU33 542 aa15.72■□□□□ 0.11
TCOF1-210ENST00000506767 SCNN1DP51172 638 aa15.72■□□□□ 0.11
TCOF1-210ENST00000506767 CENPQQ7L2Z9 268 aaPredicted RBP15.72■□□□□ 0.11
TCOF1-210ENST00000506767 SPATA5Q8NB90 893 aa15.72■□□□□ 0.11
TCOF1-210ENST00000506767 OTUD7AQ8TE49 926 aaPredicted RBP15.72■□□□□ 0.11
TCOF1-210ENST00000506767 TBC1D22AQ8WUA7 517 aa15.72■□□□□ 0.11
TCOF1-210ENST00000506767 DPF2Q92785 391 aa15.72■□□□□ 0.11
TCOF1-210ENST00000506767 FBXW7Q969H0 707 aa15.72■□□□□ 0.11
TCOF1-210ENST00000506767 CCDC136Q96JN2 1154 aa15.72■□□□□ 0.11
TCOF1-210ENST00000506767 MXD3Q9BW11 206 aa15.72■□□□□ 0.11
TCOF1-210ENST00000506767 LNPKQ9C0E8 428 aa15.72■□□□□ 0.11
TCOF1-210ENST00000506767 BCL11AQ9H165 835 aa15.72■□□□□ 0.11
TCOF1-210ENST00000506767 ZBTB47Q9UFB7 747 aaPredicted RBP15.72■□□□□ 0.11
TCOF1-210ENST00000506767 JAG2Q9Y219 1238 aa15.72■□□□□ 0.11
TCOF1-210ENST00000506767 SCN4AP35499 1836 aa15.71■□□□□ 0.11
TCOF1-210ENST00000506767 ATP5JP18859 108 aa15.71■□□□□ 0.11
TCOF1-210ENST00000506767 GMPSP49915 693 aaPredicted RBP15.71■□□□□ 0.11
TCOF1-210ENST00000506767 CHAF1AQ13111 956 aaPredicted RBP15.71■□□□□ 0.11
TCOF1-210ENST00000506767 MFSD14BQ5SR56 506 aa15.71■□□□□ 0.11
TCOF1-210ENST00000506767 PI16Q6UXB8 463 aa15.71■□□□□ 0.11
TCOF1-210ENST00000506767 WDR66Q8TBY9 1149 aa15.71■□□□□ 0.11
TCOF1-210ENST00000506767 ECHDC1Q9NTX5 307 aa15.71■□□□□ 0.11
TCOF1-210ENST00000506767 TTC41PQ6P2S7 1318 aa15.7■□□□□ 0.1
TCOF1-210ENST00000506767 GPRC5DQ9NZD1 345 aa15.7■□□□□ 0.1
TCOF1-210ENST00000506767 STAP2Q9UGK3 403 aa15.7■□□□□ 0.1
TCOF1-210ENST00000506767 MX1P20591 662 aa15.69■□□□□ 0.1
TCOF1-210ENST00000506767 MMP14P50281 582 aa15.69■□□□□ 0.1
TCOF1-210ENST00000506767 GRIK5Q16478 980 aa15.69■□□□□ 0.1
TCOF1-210ENST00000506767 CNOT7Q9UIV1 285 aaKnown RBP15.69■□□□□ 0.1
TCOF1-210ENST00000506767 SUGT1Q9Y2Z0 365 aa15.69■□□□□ 0.1
TCOF1-210ENST00000506767 CYP2E1P05181 493 aaPredicted RBP15.68■□□□□ 0.1
TCOF1-210ENST00000506767 ZAP70P43403 619 aa15.68■□□□□ 0.1
TCOF1-210ENST00000506767 ZNF280AP59817 542 aaPredicted RBP15.68■□□□□ 0.1
TCOF1-210ENST00000506767 PI4K2BQ8TCG2 481 aa15.68■□□□□ 0.1
TCOF1-210ENST00000506767 GPATCH3Q96I76 525 aa15.68■□□□□ 0.1
TCOF1-210ENST00000506767 SNRKQ9NRH2 765 aa15.68■□□□□ 0.1
TCOF1-210ENST00000506767 SHTN1A0MZ66 631 aa15.67■□□□□ 0.1
TCOF1-210ENST00000506767 USP17L8P0C7I0 530 aa15.67■□□□□ 0.1
TCOF1-210ENST00000506767 PDE4AP27815 886 aa15.67■□□□□ 0.1
TCOF1-210ENST00000506767 EPS15P42566 896 aa15.67■□□□□ 0.1
TCOF1-210ENST00000506767 PDE1AP54750 535 aa15.67■□□□□ 0.1
TCOF1-210ENST00000506767 KIAA0825Q8IV33 1275 aa15.67■□□□□ 0.1
TCOF1-210ENST00000506767 PLEKHM2Q8IWE5 1019 aa15.67■□□□□ 0.1
TCOF1-210ENST00000506767 MICALL2Q8IY33 904 aa15.67■□□□□ 0.1
TCOF1-210ENST00000506767 ZGPATQ8N5A5 531 aaKnown RBP15.67■□□□□ 0.1
TCOF1-210ENST00000506767 HAUS7Q99871 368 aa15.67■□□□□ 0.1
TCOF1-210ENST00000506767 BOLA2Q9H3K6 86 aa15.67■□□□□ 0.1
TCOF1-210ENST00000506767 OSBPL3Q9H4L5 887 aa15.67■□□□□ 0.1
TCOF1-210ENST00000506767 RRAGCQ9HB90 399 aa15.67■□□□□ 0.1
TCOF1-210ENST00000506767 HACL1Q9UJ83 578 aa15.67■□□□□ 0.1
TCOF1-210ENST00000506767 NDUFB9Q9Y6M9 179 aa15.67■□□□□ 0.1
TCOF1-210ENST00000506767 IQCA1LA6NCM1 817 aa15.66■□□□□ 0.1
TCOF1-210ENST00000506767 KIF3CO14782 793 aa15.66■□□□□ 0.1
TCOF1-210ENST00000506767 VEGFAP15692 232 aaPredicted RBP15.66■□□□□ 0.1
TCOF1-210ENST00000506767 LMOD1P29536 600 aaPredicted RBP15.66■□□□□ 0.1
TCOF1-210ENST00000506767 PRDX5P30044 214 aa15.66■□□□□ 0.1
TCOF1-210ENST00000506767 TSHZ3Q63HK5 1081 aa15.66■□□□□ 0.1
TCOF1-210ENST00000506767 TBC1D9Q6ZT07 1266 aa15.66■□□□□ 0.1
TCOF1-210ENST00000506767 MRIQ9BWK5 157 aa15.66■□□□□ 0.1
TCOF1-210ENST00000506767 NMRK2Q9NPI5 230 aa15.66■□□□□ 0.1
TCOF1-210ENST00000506767 DOCK2Q92608 1830 aa15.66■□□□□ 0.1
TCOF1-210ENST00000506767 AOX1Q06278 1338 aa15.66■□□□□ 0.1
TCOF1-210ENST00000506767 MYO5AQ9Y4I1 1855 aaKnown RBP15.65■□□□□ 0.1
TCOF1-210ENST00000506767 H7C1D1 291 aa15.65■□□□□ 0.1
TCOF1-210ENST00000506767 ERC2O15083 957 aa15.65■□□□□ 0.1
TCOF1-210ENST00000506767 IGSF3O75054 1194 aa15.65■□□□□ 0.1
TCOF1-210ENST00000506767 GLRX3O76003 335 aaKnown RBP15.65■□□□□ 0.1
TCOF1-210ENST00000506767 LDHBP07195 334 aaKnown RBP15.65■□□□□ 0.1
TCOF1-210ENST00000506767 SPTY2D1Q68D10 685 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms