RNA–Protein interactions for RNA: ENST00000506714.5

HERC6-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 2

Gene HERC6, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-206ENST00000506714 PLBD2Q8NHP8 589 aa17.52■□□□□ 0.4
HERC6-206ENST00000506714 ERO1AQ96HE7 468 aa17.52■□□□□ 0.4
HERC6-206ENST00000506714 PRDM11Q9NQV5 511 aa17.52■□□□□ 0.4
HERC6-206ENST00000506714 PCDHA7Q9UN72 937 aa17.52■□□□□ 0.4
HERC6-206ENST00000506714 MORC2Q9Y6X9 1032 aaPredicted RBP17.52■□□□□ 0.4
HERC6-206ENST00000506714 LAMB4A4D0S4 1761 aa17.52■□□□□ 0.39
HERC6-206ENST00000506714 ARID5BQ14865 1188 aa17.51■□□□□ 0.39
HERC6-206ENST00000506714 LMBR1LQ6UX01 489 aa17.51■□□□□ 0.39
HERC6-206ENST00000506714 ZNF397Q8NF99 534 aaPredicted RBP17.51■□□□□ 0.39
HERC6-206ENST00000506714 USP27XA6NNY8 438 aa17.51■□□□□ 0.39
HERC6-206ENST00000506714 TUBB4AP04350 444 aa17.51■□□□□ 0.39
HERC6-206ENST00000506714 FOSBP53539 338 aa17.51■□□□□ 0.39
HERC6-206ENST00000506714 KCNG4Q8TDN1 519 aa17.51■□□□□ 0.39
HERC6-206ENST00000506714 NEUROD6Q96NK8 337 aa17.51■□□□□ 0.39
HERC6-206ENST00000506714 RNF113AO15541 343 aaKnown RBP17.5■□□□□ 0.39
HERC6-206ENST00000506714 DHX16O60231 1041 aaKnown RBP17.5■□□□□ 0.39
HERC6-206ENST00000506714 IL15P40933 162 aaPredicted RBP17.5■□□□□ 0.39
HERC6-206ENST00000506714 TPM4P67936 248 aa17.5■□□□□ 0.39
HERC6-206ENST00000506714 LRRFIP1Q32MZ4 808 aaKnown RBP17.5■□□□□ 0.39
HERC6-206ENST00000506714 ILDR1Q86SU0 546 aaPredicted RBP17.5■□□□□ 0.39
HERC6-206ENST00000506714 CCDC150Q8NCX0 1101 aa17.5■□□□□ 0.39
HERC6-206ENST00000506714 NAP1L2Q9ULW6 460 aaPredicted RBP17.5■□□□□ 0.39
HERC6-206ENST00000506714 NRDCO43847 1150 aa17.5■□□□□ 0.39
HERC6-206ENST00000506714 YEATS4O95619 227 aa17.5■□□□□ 0.39
HERC6-206ENST00000506714 NCOA5Q9HCD5 579 aaKnown RBP17.5■□□□□ 0.39
HERC6-206ENST00000506714 KIAA1468Q9P260 1216 aa17.5■□□□□ 0.39
HERC6-206ENST00000506714 ATP5J2-PTCD1G3V325 749 aa17.49■□□□□ 0.39
HERC6-206ENST00000506714 H7C1W4 665 aa17.49■□□□□ 0.39
HERC6-206ENST00000506714 PTCD1O75127 700 aaKnown RBP17.49■□□□□ 0.39
HERC6-206ENST00000506714 KCNJ6P48051 423 aa17.49■□□□□ 0.39
HERC6-206ENST00000506714 STK38Q15208 465 aa17.49■□□□□ 0.39
HERC6-206ENST00000506714 SF3A1Q15459 793 aaKnown RBP17.49■□□□□ 0.39
HERC6-206ENST00000506714 SLFNL1Q499Z3 407 aa17.49■□□□□ 0.39
HERC6-206ENST00000506714 ATG9AQ7Z3C6 839 aa17.49■□□□□ 0.39
HERC6-206ENST00000506714 RGS22Q8NE09 1264 aa17.49■□□□□ 0.39
HERC6-206ENST00000506714 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.49■□□□□ 0.39
HERC6-206ENST00000506714 DCAF5Q96JK2 942 aa17.49■□□□□ 0.39
HERC6-206ENST00000506714 POLR3EQ9NVU0 708 aa17.49■□□□□ 0.39
HERC6-206ENST00000506714 SLU7O95391 586 aaKnown RBP17.49■□□□□ 0.39
HERC6-206ENST00000506714 FOXO4P98177 505 aa17.49■□□□□ 0.39
HERC6-206ENST00000506714 BRAPQ7Z569 592 aa17.49■□□□□ 0.39
HERC6-206ENST00000506714 LINC00301Q8NCQ3 95 aa17.49■□□□□ 0.39
HERC6-206ENST00000506714 ZNF215Q9UL58 517 aaPredicted RBP17.49■□□□□ 0.39
HERC6-206ENST00000506714 IFIT1P09914 478 aaKnown RBP17.48■□□□□ 0.39
HERC6-206ENST00000506714 GUCY1B3Q02153 619 aa17.48■□□□□ 0.39
HERC6-206ENST00000506714 NAA30Q147X3 362 aaPredicted RBP17.48■□□□□ 0.39
HERC6-206ENST00000506714 MAST3O60307 1309 aa17.48■□□□□ 0.39
HERC6-206ENST00000506714 PSDA5PKW4 1024 aaPredicted RBP17.47■□□□□ 0.39
HERC6-206ENST00000506714 FDPSP14324 419 aaKnown RBP17.47■□□□□ 0.39
HERC6-206ENST00000506714 NBPF11Q86T75 865 aa17.47■□□□□ 0.39
HERC6-206ENST00000506714 C8orf76Q96K31 380 aa17.47■□□□□ 0.39
HERC6-206ENST00000506714 TRMT1Q9NXH9 659 aaKnown RBP17.47■□□□□ 0.39
HERC6-206ENST00000506714 MEGF6O75095 1541 aa17.46■□□□□ 0.39
HERC6-206ENST00000506714 A0A1B0GVL5 298 aa17.46■□□□□ 0.39
HERC6-206ENST00000506714 NDUFA8P51970 172 aa17.46■□□□□ 0.39
HERC6-206ENST00000506714 ATG3Q9NT62 314 aa17.46■□□□□ 0.39
HERC6-206ENST00000506714 AHDC1Q5TGY3 1603 aaPredicted RBP17.46■□□□□ 0.39
HERC6-206ENST00000506714 SPTLC2O15270 562 aa17.46■□□□□ 0.39
HERC6-206ENST00000506714 NLRP12P59046 1061 aa17.46■□□□□ 0.39
HERC6-206ENST00000506714 TIMM10P62072 90 aa17.46■□□□□ 0.39
HERC6-206ENST00000506714 KRT222Q8N1A0 295 aa17.46■□□□□ 0.39
HERC6-206ENST00000506714 EYA2O00167 538 aa17.45■□□□□ 0.38
HERC6-206ENST00000506714 CIAO1O76071 339 aa17.45■□□□□ 0.38
HERC6-206ENST00000506714 SLC3A2P08195 630 aaKnown RBP17.45■□□□□ 0.38
HERC6-206ENST00000506714 IMMTQ16891 758 aaKnown RBP17.45■□□□□ 0.38
HERC6-206ENST00000506714 SYNE3Q6ZMZ3 975 aa17.45■□□□□ 0.38
HERC6-206ENST00000506714 FBXO18Q8NFZ0 1043 aa17.45■□□□□ 0.38
HERC6-206ENST00000506714 CWC25Q9NXE8 425 aaPredicted RBP17.45■□□□□ 0.38
HERC6-206ENST00000506714 CCDC9Q9Y3X0 531 aaKnown RBP17.45■□□□□ 0.38
HERC6-206ENST00000506714 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.45■□□□□ 0.38
HERC6-206ENST00000506714 CCP110O43303 1012 aa17.45■□□□□ 0.38
HERC6-206ENST00000506714 ZFYP08048 801 aaPredicted RBP17.45■□□□□ 0.38
HERC6-206ENST00000506714 SFPQP23246 707 aaKnown RBP eCLIP17.45■□□□□ 0.38
HERC6-206ENST00000506714 NUP188Q5SRE5 1749 aa17.44■□□□□ 0.38
HERC6-206ENST00000506714 PKD1L3Q7Z443 1732 aa17.44■□□□□ 0.38
HERC6-206ENST00000506714 DDX60Q8IY21 1712 aaKnown RBP17.44■□□□□ 0.38
HERC6-206ENST00000506714 A0A087WWV3 80 aa17.44■□□□□ 0.38
HERC6-206ENST00000506714 PIP4K2AP48426 406 aaPredicted RBP17.44■□□□□ 0.38
HERC6-206ENST00000506714 DPCR1Q3MIW9 517 aa17.44■□□□□ 0.38
HERC6-206ENST00000506714 KMT5BQ4FZB7 885 aa17.44■□□□□ 0.38
HERC6-206ENST00000506714 CHST3Q7LGC8 479 aa17.44■□□□□ 0.38
HERC6-206ENST00000506714 XPO4Q9C0E2 1151 aaKnown RBP17.44■□□□□ 0.38
HERC6-206ENST00000506714 L2HGDHQ9H9P8 463 aa17.44■□□□□ 0.38
HERC6-206ENST00000506714 COL5A2P05997 1499 aaPredicted RBP17.44■□□□□ 0.38
HERC6-206ENST00000506714 SMC2O95347 1197 aa17.44■□□□□ 0.38
HERC6-206ENST00000506714 MYSM1Q5VVJ2 828 aa17.44■□□□□ 0.38
HERC6-206ENST00000506714 TAF3Q5VWG9 929 aa17.44■□□□□ 0.38
HERC6-206ENST00000506714 IFNKQ9P0W0 207 aa17.44■□□□□ 0.38
HERC6-206ENST00000506714 PARP4Q9UKK3 1724 aaKnown RBP17.44■□□□□ 0.38
HERC6-206ENST00000506714 NWD2Q9ULI1 1742 aa17.44■□□□□ 0.38
HERC6-206ENST00000506714 CLIC4Q9Y696 253 aa17.44■□□□□ 0.38
HERC6-206ENST00000506714 TJP1Q07157 1748 aa17.43■□□□□ 0.38
HERC6-206ENST00000506714 WDR17Q8IZU2 1322 aa17.43■□□□□ 0.38
HERC6-206ENST00000506714 WDR19Q8NEZ3 1342 aa17.43■□□□□ 0.38
HERC6-206ENST00000506714 A0A1B0GUL7 405 aa17.43■□□□□ 0.38
HERC6-206ENST00000506714 IKBKBO14920 756 aa17.43■□□□□ 0.38
HERC6-206ENST00000506714 ZNF202O95125 648 aa17.43■□□□□ 0.38
HERC6-206ENST00000506714 CMA1P23946 247 aa17.43■□□□□ 0.38
HERC6-206ENST00000506714 E4F1Q66K89 784 aaPredicted RBP17.43■□□□□ 0.38
HERC6-206ENST00000506714 ZNF771Q7L3S4 317 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms