RNA–Protein interactions for RNA: ENST00000506687.5

CPNE4-207, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-207ENST00000506687 CAPN10Q9HC96 672 aa6.36□□□□□ -1.39
CPNE4-207ENST00000506687 SEPT3Q9UH03 358 aa6.36□□□□□ -1.39
CPNE4-207ENST00000506687 FKBPLQ9UIM3 349 aa6.36□□□□□ -1.39
CPNE4-207ENST00000506687 COLQQ9Y215 455 aaPredicted RBP6.36□□□□□ -1.39
CPNE4-207ENST00000506687 DNMT3AQ9Y6K1 912 aaPredicted RBP6.36□□□□□ -1.39
CPNE4-207ENST00000506687 DLG5Q8TDM6 1919 aa6.36□□□□□ -1.39
CPNE4-207ENST00000506687 VIRMAQ69YN4 1812 aaKnown RBP6.36□□□□□ -1.39
CPNE4-207ENST00000506687 DOT1LQ8TEK3 1739 aa6.36□□□□□ -1.39
CPNE4-207ENST00000506687 MRC1P22897 1456 aa6.35□□□□□ -1.39
CPNE4-207ENST00000506687 TRIM6-TRIM34B2RNG4 842 aa6.35□□□□□ -1.39
CPNE4-207ENST00000506687 APAF1O14727 1248 aa6.35□□□□□ -1.39
CPNE4-207ENST00000506687 LGR5O75473 907 aa6.35□□□□□ -1.39
CPNE4-207ENST00000506687 FMNL1O95466 1100 aaPredicted RBP6.35□□□□□ -1.39
CPNE4-207ENST00000506687 ITGBL1O95965 494 aaPredicted RBP6.35□□□□□ -1.39
CPNE4-207ENST00000506687 NUDT7P0C024 238 aa6.35□□□□□ -1.39
CPNE4-207ENST00000506687 POTEIP0CG38 1075 aa6.35□□□□□ -1.39
CPNE4-207ENST00000506687 POTEJP0CG39 1038 aa6.35□□□□□ -1.39
CPNE4-207ENST00000506687 ATP1A2P50993 1020 aa6.35□□□□□ -1.39
CPNE4-207ENST00000506687 RASSF7Q02833 373 aa6.35□□□□□ -1.39
CPNE4-207ENST00000506687 EVX2Q03828 476 aa6.35□□□□□ -1.39
CPNE4-207ENST00000506687 ASTLQ6HA08 431 aaPredicted RBP6.35□□□□□ -1.39
CPNE4-207ENST00000506687 METTL16Q86W50 562 aaKnown RBP6.35□□□□□ -1.39
CPNE4-207ENST00000506687 TRIM50Q86XT4 487 aa6.35□□□□□ -1.39
CPNE4-207ENST00000506687 NLGN1Q8N2Q7 840 aa6.35□□□□□ -1.39
CPNE4-207ENST00000506687 MICAL1Q8TDZ2 1067 aa6.35□□□□□ -1.39
CPNE4-207ENST00000506687 FAM161BQ96MY7 647 aa6.35□□□□□ -1.39
CPNE4-207ENST00000506687 CCSER2Q9H7U1 834 aa6.35□□□□□ -1.39
CPNE4-207ENST00000506687 SLC52A2Q9HAB3 445 aa6.35□□□□□ -1.39
CPNE4-207ENST00000506687 ATG3Q9NT62 314 aa6.35□□□□□ -1.39
CPNE4-207ENST00000506687 ASAP1Q9ULH1 1129 aa6.35□□□□□ -1.39
CPNE4-207ENST00000506687 ABT1Q9ULW3 272 aaKnown RBP6.35□□□□□ -1.39
CPNE4-207ENST00000506687 SIPA1L3O60292 1781 aaPredicted RBP6.34□□□□□ -1.39
CPNE4-207ENST00000506687 RAB11FIP3O75154 756 aa6.34□□□□□ -1.39
CPNE4-207ENST00000506687 MAP2K2P36507 400 aa6.34□□□□□ -1.39
CPNE4-207ENST00000506687 SEC13P55735 322 aa6.34□□□□□ -1.39
CPNE4-207ENST00000506687 RIPK4P57078 832 aa6.34□□□□□ -1.39
CPNE4-207ENST00000506687 CABP4P57796 275 aa6.34□□□□□ -1.39
CPNE4-207ENST00000506687 DCTN1Q14203 1278 aa6.34□□□□□ -1.39
CPNE4-207ENST00000506687 MCM10Q7L590 875 aa6.34□□□□□ -1.39
CPNE4-207ENST00000506687 PHTF2Q8N3S3 785 aa6.34□□□□□ -1.39
CPNE4-207ENST00000506687 LARGE2Q8N3Y3 721 aa6.34□□□□□ -1.39
CPNE4-207ENST00000506687 CAPNS2Q96L46 248 aa6.34□□□□□ -1.39
CPNE4-207ENST00000506687 SLC4A9Q96Q91 983 aa6.34□□□□□ -1.39
CPNE4-207ENST00000506687 TMOD3Q9NYL9 352 aa6.34□□□□□ -1.39
CPNE4-207ENST00000506687 KIAA1024Q9UPX6 916 aa6.34□□□□□ -1.39
CPNE4-207ENST00000506687 NOD1Q9Y239 953 aa6.34□□□□□ -1.39
CPNE4-207ENST00000506687 RBM19Q9Y4C8 960 aaKnown RBP6.34□□□□□ -1.39
CPNE4-207ENST00000506687 LY75O60449 1722 aa6.33□□□□□ -1.4
CPNE4-207ENST00000506687 MAPK8IP3Q9UPT6 1336 aa6.33□□□□□ -1.4
CPNE4-207ENST00000506687 IQCA1LA6NCM1 817 aa6.33□□□□□ -1.4
CPNE4-207ENST00000506687 MAP7D1Q3KQU3 841 aa6.33□□□□□ -1.4
CPNE4-207ENST00000506687 SWT1Q5T5J6 900 aaKnown RBP6.33□□□□□ -1.4
CPNE4-207ENST00000506687 SDE2Q6IQ49 451 aa6.33□□□□□ -1.4
CPNE4-207ENST00000506687 LYPD8Q6UX82 237 aa6.33□□□□□ -1.4
CPNE4-207ENST00000506687 RETREG3Q86VR2 466 aa6.33□□□□□ -1.4
CPNE4-207ENST00000506687 FAM9BQ8IZU0 186 aa6.33□□□□□ -1.4
CPNE4-207ENST00000506687 SLC43A3Q8NBI5 491 aa6.33□□□□□ -1.4
CPNE4-207ENST00000506687 SMARCC1Q92922 1105 aaPredicted RBP6.33□□□□□ -1.4
CPNE4-207ENST00000506687 KHSRPQ92945 711 aaKnown RBP eCLIP6.33□□□□□ -1.4
CPNE4-207ENST00000506687 THUMPD2Q9BTF0 503 aaKnown RBP6.33□□□□□ -1.4
CPNE4-207ENST00000506687 RRP7AQ9Y3A4 280 aaKnown RBP6.33□□□□□ -1.4
CPNE4-207ENST00000506687 PCDHB9Q9Y5E1 797 aa6.33□□□□□ -1.4
CPNE4-207ENST00000506687 PARP3Q9Y6F1 533 aa6.33□□□□□ -1.4
CPNE4-207ENST00000506687 PALLDQ8WX93 1383 aa6.32□□□□□ -1.4
CPNE4-207ENST00000506687 SFI1A8K8P3 1242 aa6.32□□□□□ -1.4
CPNE4-207ENST00000506687 CHL1O00533 1208 aa6.32□□□□□ -1.4
CPNE4-207ENST00000506687 ZBTB7BO15156 539 aaPredicted RBP6.32□□□□□ -1.4
CPNE4-207ENST00000506687 KCNQ3O43525 872 aa6.32□□□□□ -1.4
CPNE4-207ENST00000506687 DKK1O94907 266 aa6.32□□□□□ -1.4
CPNE4-207ENST00000506687 NEFMP07197 916 aa6.32□□□□□ -1.4
CPNE4-207ENST00000506687 ZNF853P0CG23 659 aa6.32□□□□□ -1.4
CPNE4-207ENST00000506687 SLC39A6Q13433 755 aa6.32□□□□□ -1.4
CPNE4-207ENST00000506687 TAF7Q15545 349 aaPredicted RBP6.32□□□□□ -1.4
CPNE4-207ENST00000506687 TSGA10IPQ3SY00 556 aa6.32□□□□□ -1.4
CPNE4-207ENST00000506687 CAPN12Q6ZSI9 719 aa6.32□□□□□ -1.4
CPNE4-207ENST00000506687 TMC7Q7Z402 723 aa6.32□□□□□ -1.4
CPNE4-207ENST00000506687 RNF34Q969K3 372 aa6.32□□□□□ -1.4
CPNE4-207ENST00000506687 TGIF2Q9GZN2 237 aa6.32□□□□□ -1.4
CPNE4-207ENST00000506687 ACBD3Q9H3P7 528 aa6.32□□□□□ -1.4
CPNE4-207ENST00000506687 PIF1Q9H611 641 aa6.32□□□□□ -1.4
CPNE4-207ENST00000506687 BABAM1Q9NWV8 329 aa6.32□□□□□ -1.4
CPNE4-207ENST00000506687 ZNF831Q5JPB2 1677 aa6.32□□□□□ -1.4
CPNE4-207ENST00000506687 HEG1Q9ULI3 1381 aa6.31□□□□□ -1.4
CPNE4-207ENST00000506687 ZNF521Q96K83 1311 aa6.31□□□□□ -1.4
CPNE4-207ENST00000506687 KIAA1551Q9HCM1 1747 aa6.31□□□□□ -1.4
CPNE4-207ENST00000506687 PDE4DIPQ5VU43 2346 aa6.31□□□□□ -1.4
CPNE4-207ENST00000506687 LOC102724428A0A0B4J2F2 783 aa6.31□□□□□ -1.4
CPNE4-207ENST00000506687 PTPREP23469 700 aa6.31□□□□□ -1.4
CPNE4-207ENST00000506687 DNAJA1P31689 397 aaKnown RBP6.31□□□□□ -1.4
CPNE4-207ENST00000506687 ATP6V1AP38606 617 aa6.31□□□□□ -1.4
CPNE4-207ENST00000506687 SIK1P57059 783 aa6.31□□□□□ -1.4
CPNE4-207ENST00000506687 LMOD3Q0VAK6 560 aa6.31□□□□□ -1.4
CPNE4-207ENST00000506687 ITPK1Q13572 414 aa6.31□□□□□ -1.4
CPNE4-207ENST00000506687 EGFLAMQ63HQ2 1017 aa6.31□□□□□ -1.4
CPNE4-207ENST00000506687 DESI1Q6ICB0 168 aa6.31□□□□□ -1.4
CPNE4-207ENST00000506687 CYP4F22Q6NT55 531 aa6.31□□□□□ -1.4
CPNE4-207ENST00000506687 ZNF790Q6PG37 636 aa6.31□□□□□ -1.4
CPNE4-207ENST00000506687 TRAF7Q6Q0C0 670 aa6.31□□□□□ -1.4
CPNE4-207ENST00000506687 SIX5Q8N196 739 aa6.31□□□□□ -1.4
CPNE4-207ENST00000506687 NGEFQ8N5V2 710 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms