RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 PSME4Q14997 1843 aa18.14■□□□□ 0.49
CDC42SE2-209ENST00000506419 UBE2Q2LH0YL09 131 aa18.13■□□□□ 0.49
CDC42SE2-209ENST00000506419 GYG1P46976 350 aa18.13■□□□□ 0.49
CDC42SE2-209ENST00000506419 TDRD7Q8NHU6 1098 aaKnown RBP18.13■□□□□ 0.49
CDC42SE2-209ENST00000506419 SMC4Q9NTJ3 1288 aa18.13■□□□□ 0.49
CDC42SE2-209ENST00000506419 HDAC9Q9UKV0 1011 aa18.13■□□□□ 0.49
CDC42SE2-209ENST00000506419 NOB1Q9ULX3 412 aaKnown RBP18.13■□□□□ 0.49
CDC42SE2-209ENST00000506419 F8W031 263 aaPredicted RBP18.12■□□□□ 0.49
CDC42SE2-209ENST00000506419 CSRNP1Q96S65 589 aa18.12■□□□□ 0.49
CDC42SE2-209ENST00000506419 AOX1Q06278 1338 aa18.12■□□□□ 0.49
CDC42SE2-209ENST00000506419 THSD7BQ9C0I4 1608 aa18.12■□□□□ 0.49
CDC42SE2-209ENST00000506419 SLC10A3P09131 477 aa18.11■□□□□ 0.49
CDC42SE2-209ENST00000506419 HIBADHP31937 336 aaKnown RBP18.11■□□□□ 0.49
CDC42SE2-209ENST00000506419 RFX5P48382 616 aaPredicted RBP18.11■□□□□ 0.49
CDC42SE2-209ENST00000506419 FKBP1AP62942 108 aaKnown RBP18.11■□□□□ 0.49
CDC42SE2-209ENST00000506419 FKBP1BP68106 108 aa18.11■□□□□ 0.49
CDC42SE2-209ENST00000506419 FBXO33Q7Z6M2 555 aa18.11■□□□□ 0.49
CDC42SE2-209ENST00000506419 MTMR14Q8NCE2 650 aa18.11■□□□□ 0.49
CDC42SE2-209ENST00000506419 PRMT6Q96LA8 375 aaPredicted RBP18.11■□□□□ 0.49
CDC42SE2-209ENST00000506419 FAM205AQ6ZU69 1335 aa18.11■□□□□ 0.49
CDC42SE2-209ENST00000506419 ZNF646O15015 1829 aaPredicted RBP18.11■□□□□ 0.49
CDC42SE2-209ENST00000506419 MROH5Q6ZUA9 1318 aa18.1■□□□□ 0.49
CDC42SE2-209ENST00000506419 DLGAP5Q15398 846 aa18.1■□□□□ 0.49
CDC42SE2-209ENST00000506419 CFAP100Q494V2 611 aa18.1■□□□□ 0.49
CDC42SE2-209ENST00000506419 VGLL2Q8N8G2 317 aa18.1■□□□□ 0.49
CDC42SE2-209ENST00000506419 CA12O43570 354 aa18.09■□□□□ 0.49
CDC42SE2-209ENST00000506419 CT47B1P0C2W7 299 aaPredicted RBP18.09■□□□□ 0.49
CDC42SE2-209ENST00000506419 RARSP54136 660 aaKnown RBP18.09■□□□□ 0.49
CDC42SE2-209ENST00000506419 RASAL3Q86YV0 1011 aa18.09■□□□□ 0.49
CDC42SE2-209ENST00000506419 PDE8BO95263 885 aa18.08■□□□□ 0.48
CDC42SE2-209ENST00000506419 GRIK5Q16478 980 aa18.08■□□□□ 0.48
CDC42SE2-209ENST00000506419 METTL24Q5JXM2 366 aa18.08■□□□□ 0.48
CDC42SE2-209ENST00000506419 DEFB129Q9H1M3 183 aa18.08■□□□□ 0.48
CDC42SE2-209ENST00000506419 RNF186Q9NXI6 227 aa18.08■□□□□ 0.48
CDC42SE2-209ENST00000506419 SPDYE2BA6NHP3 402 aa18.07■□□□□ 0.48
CDC42SE2-209ENST00000506419 SPDYE6P0CI01 402 aa18.07■□□□□ 0.48
CDC42SE2-209ENST00000506419 PTPN12Q05209 780 aaKnown RBP18.07■□□□□ 0.48
CDC42SE2-209ENST00000506419 PRKG1Q13976 671 aa18.07■□□□□ 0.48
CDC42SE2-209ENST00000506419 APOBEC3FQ8IUX4 373 aaKnown RBP18.07■□□□□ 0.48
CDC42SE2-209ENST00000506419 FZD1Q9UP38 647 aa18.07■□□□□ 0.48
CDC42SE2-209ENST00000506419 IQSEC3Q9UPP2 1182 aaPredicted RBP18.07■□□□□ 0.48
CDC42SE2-209ENST00000506419 CLRN2A0PK11 232 aa18.06■□□□□ 0.48
CDC42SE2-209ENST00000506419 FGFR2P21802 821 aa18.06■□□□□ 0.48
CDC42SE2-209ENST00000506419 BCAMP50895 628 aa18.06■□□□□ 0.48
CDC42SE2-209ENST00000506419 MIER1Q8N108 512 aa18.06■□□□□ 0.48
CDC42SE2-209ENST00000506419 EYA2O00167 538 aa18.05■□□□□ 0.48
CDC42SE2-209ENST00000506419 TRPA1O75762 1119 aa18.05■□□□□ 0.48
CDC42SE2-209ENST00000506419 TTLL12Q14166 644 aaPredicted RBP18.05■□□□□ 0.48
CDC42SE2-209ENST00000506419 MFSD14BQ5SR56 506 aa18.05■□□□□ 0.48
CDC42SE2-209ENST00000506419 LDLRAD1Q5T700 205 aa18.05■□□□□ 0.48
CDC42SE2-209ENST00000506419 ATG9AQ7Z3C6 839 aa18.05■□□□□ 0.48
CDC42SE2-209ENST00000506419 ABHD8Q96I13 439 aa18.05■□□□□ 0.48
CDC42SE2-209ENST00000506419 API5Q9BZZ5 524 aaKnown RBP18.05■□□□□ 0.48
CDC42SE2-209ENST00000506419 TTF2Q9UNY4 1162 aaKnown RBP18.04■□□□□ 0.48
CDC42SE2-209ENST00000506419 UBTFL1P0CB47 393 aaPredicted RBP18.03■□□□□ 0.48
CDC42SE2-209ENST00000506419 NF2P35240 595 aa18.03■□□□□ 0.48
CDC42SE2-209ENST00000506419 RBM5P52756 815 aaKnown RBP eCLIP18.03■□□□□ 0.48
CDC42SE2-209ENST00000506419 CHAF1AQ13111 956 aaPredicted RBP18.03■□□□□ 0.48
CDC42SE2-209ENST00000506419 NBPF12Q5TAG4 269 aaPredicted RBP18.03■□□□□ 0.48
CDC42SE2-209ENST00000506419 SAGE1Q9NXZ1 904 aa18.03■□□□□ 0.48
CDC42SE2-209ENST00000506419 A0A1B0GUL6 1792 aa18.02■□□□□ 0.48
CDC42SE2-209ENST00000506419 CAVIN4Q5BKX8 364 aa18.02■□□□□ 0.48
CDC42SE2-209ENST00000506419 ARMC9Q7Z3E5 817 aa18.02■□□□□ 0.48
CDC42SE2-209ENST00000506419 VPS37DQ86XT2 251 aa18.02■□□□□ 0.48
CDC42SE2-209ENST00000506419 ARHGAP45Q92619 1136 aa18.02■□□□□ 0.48
CDC42SE2-209ENST00000506419 MEIS3Q99687 375 aa18.02■□□□□ 0.48
CDC42SE2-209ENST00000506419 TDRD3Q9H7E2 651 aaKnown RBP18.02■□□□□ 0.48
CDC42SE2-209ENST00000506419 VEZTQ9HBM0 779 aa18.02■□□□□ 0.48
CDC42SE2-209ENST00000506419 ZNF70Q9UC06 446 aaPredicted RBP18.02■□□□□ 0.48
CDC42SE2-209ENST00000506419 SERPINA10Q9UK55 444 aa18.02■□□□□ 0.48
CDC42SE2-209ENST00000506419 ANGEL1Q9UNK9 670 aaKnown RBP18.02■□□□□ 0.48
CDC42SE2-209ENST00000506419 TNNQ9UQP3 1299 aa18.02■□□□□ 0.48
CDC42SE2-209ENST00000506419 LRRFIP2Q9Y608 721 aaKnown RBP18.02■□□□□ 0.48
CDC42SE2-209ENST00000506419 BCAR3O75815 825 aa18.01■□□□□ 0.47
CDC42SE2-209ENST00000506419 CRKP46108 304 aa18.01■□□□□ 0.47
CDC42SE2-209ENST00000506419 MKRN3Q13064 507 aaKnown RBP18.01■□□□□ 0.47
CDC42SE2-209ENST00000506419 RASA3Q14644 834 aa18.01■□□□□ 0.47
CDC42SE2-209ENST00000506419 PUM3Q15397 648 aaKnown RBP18.01■□□□□ 0.47
CDC42SE2-209ENST00000506419 INTS3Q68E01 1043 aaKnown RBP18.01■□□□□ 0.47
CDC42SE2-209ENST00000506419 REM2Q8IYK8 340 aaPredicted RBP18.01■□□□□ 0.47
CDC42SE2-209ENST00000506419 DZIP1LQ8IYY4 767 aaKnown RBP18.01■□□□□ 0.47
CDC42SE2-209ENST00000506419 PAPPA2Q9BXP8 1791 aa18■□□□□ 0.47
CDC42SE2-209ENST00000506419 MYO1BO43795 1136 aa18■□□□□ 0.47
CDC42SE2-209ENST00000506419 USP2O75604 605 aaPredicted RBP18■□□□□ 0.47
CDC42SE2-209ENST00000506419 TM4SF4P48230 202 aa18■□□□□ 0.47
CDC42SE2-209ENST00000506419 MAP3K11Q16584 847 aa18■□□□□ 0.47
CDC42SE2-209ENST00000506419 SPDYE2Q495Y8 402 aa18■□□□□ 0.47
CDC42SE2-209ENST00000506419 MCOLN1Q9GZU1 580 aa18■□□□□ 0.47
CDC42SE2-209ENST00000506419 SIL1Q9H173 461 aa18■□□□□ 0.47
CDC42SE2-209ENST00000506419 PA2G4Q9UQ80 394 aaKnown RBP18■□□□□ 0.47
CDC42SE2-209ENST00000506419 FRAT2O75474 233 aaPredicted RBP17.99■□□□□ 0.47
CDC42SE2-209ENST00000506419 IFIT1P09914 478 aaKnown RBP17.99■□□□□ 0.47
CDC42SE2-209ENST00000506419 LPIN2Q92539 896 aa17.99■□□□□ 0.47
CDC42SE2-209ENST00000506419 PPP2R3BQ9Y5P8 575 aa17.99■□□□□ 0.47
CDC42SE2-209ENST00000506419 CIAO1O76071 339 aa17.98■□□□□ 0.47
CDC42SE2-209ENST00000506419 SUPT20HL1Q3ZLR7 823 aa17.98■□□□□ 0.47
CDC42SE2-209ENST00000506419 SPRYD7Q5W111 196 aa17.98■□□□□ 0.47
CDC42SE2-209ENST00000506419 CDAN1Q8IWY9 1227 aa17.98■□□□□ 0.47
CDC42SE2-209ENST00000506419 TBC1D22AQ8WUA7 517 aa17.98■□□□□ 0.47
CDC42SE2-209ENST00000506419 CLMNQ96JQ2 1002 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms