RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 PLVAPQ9BX97 442 aa6.88□□□□□ -1.31
TOPBP1-204ENST00000505804 FAM8A1Q9UBU6 413 aa6.88□□□□□ -1.31
TOPBP1-204ENST00000505804 VTI1BQ9UEU0 232 aa6.88□□□□□ -1.31
TOPBP1-204ENST00000505804 AKAP2Q9Y2D5 859 aa6.88□□□□□ -1.31
TOPBP1-204ENST00000505804 GNB5O14775 395 aa6.87□□□□□ -1.31
TOPBP1-204ENST00000505804 GSTT1P30711 240 aa6.87□□□□□ -1.31
TOPBP1-204ENST00000505804 MRPL58Q14197 206 aaKnown RBP6.87□□□□□ -1.31
TOPBP1-204ENST00000505804 C3orf58Q8NDZ4 430 aa6.87□□□□□ -1.31
TOPBP1-204ENST00000505804 SOX1O00570 391 aaPredicted RBP6.86□□□□□ -1.31
TOPBP1-204ENST00000505804 CTSHP09668 335 aa6.86□□□□□ -1.31
TOPBP1-204ENST00000505804 CABP4P57796 275 aa6.86□□□□□ -1.31
TOPBP1-204ENST00000505804 PTPN12Q05209 780 aaKnown RBP6.86□□□□□ -1.31
TOPBP1-204ENST00000505804 PCDH1Q08174 1060 aa6.86□□□□□ -1.31
TOPBP1-204ENST00000505804 ZNF423Q2M1K9 1284 aa6.86□□□□□ -1.31
TOPBP1-204ENST00000505804 HGSNATQ68CP4 663 aa6.86□□□□□ -1.31
TOPBP1-204ENST00000505804 PODNQ7Z5L7 613 aa6.86□□□□□ -1.31
TOPBP1-204ENST00000505804 BCL11AQ9H165 835 aa6.86□□□□□ -1.31
TOPBP1-204ENST00000505804 CLEC4MQ9H2X3 399 aaPredicted RBP6.86□□□□□ -1.31
TOPBP1-204ENST00000505804 ZNF576Q9H609 170 aa6.86□□□□□ -1.31
TOPBP1-204ENST00000505804 KIAA1522Q9P206 1035 aaPredicted RBP6.86□□□□□ -1.31
TOPBP1-204ENST00000505804 H3BRJ5 948 aa6.85□□□□□ -1.31
TOPBP1-204ENST00000505804 XRCC5P13010 732 aaKnown RBP6.85□□□□□ -1.31
TOPBP1-204ENST00000505804 ZNF157P51786 506 aaPredicted RBP6.85□□□□□ -1.31
TOPBP1-204ENST00000505804 IKBKEQ14164 716 aa6.85□□□□□ -1.31
TOPBP1-204ENST00000505804 SETDB1Q15047 1291 aa6.85□□□□□ -1.31
TOPBP1-204ENST00000505804 SLC7A3Q8WY07 619 aa6.85□□□□□ -1.31
TOPBP1-204ENST00000505804 BACH2Q9BYV9 841 aa6.85□□□□□ -1.31
TOPBP1-204ENST00000505804 A0A0A0MRY4 1105 aa6.84□□□□□ -1.31
TOPBP1-204ENST00000505804 FAM181BA6NEQ2 426 aa6.84□□□□□ -1.31
TOPBP1-204ENST00000505804 FAM229AH3BQW9 127 aa6.84□□□□□ -1.31
TOPBP1-204ENST00000505804 PIK3R2O00459 728 aa6.84□□□□□ -1.31
TOPBP1-204ENST00000505804 FSCN2O14926 492 aa6.84□□□□□ -1.31
TOPBP1-204ENST00000505804 FBXO24O75426 580 aa6.84□□□□□ -1.31
TOPBP1-204ENST00000505804 ESRRAP11474 423 aaPredicted RBP6.84□□□□□ -1.31
TOPBP1-204ENST00000505804 FAAP100Q0VG06 881 aa6.84□□□□□ -1.31
TOPBP1-204ENST00000505804 TRIM28Q13263 835 aaKnown RBP6.84□□□□□ -1.31
TOPBP1-204ENST00000505804 MEI1Q5TIA1 1274 aa6.84□□□□□ -1.31
TOPBP1-204ENST00000505804 FAM117BQ6P1L5 589 aa6.84□□□□□ -1.31
TOPBP1-204ENST00000505804 SCARF2Q96GP6 870 aaPredicted RBP6.84□□□□□ -1.31
TOPBP1-204ENST00000505804 CARD10Q9BWT7 1032 aa6.84□□□□□ -1.31
TOPBP1-204ENST00000505804 ZFYVE1Q9HBF4 777 aa6.84□□□□□ -1.31
TOPBP1-204ENST00000505804 DEAF1O75398 565 aaPredicted RBP6.83□□□□□ -1.32
TOPBP1-204ENST00000505804 ITGAEP38570 1179 aa6.83□□□□□ -1.32
TOPBP1-204ENST00000505804 TSNAXIP1Q2TAA8 658 aa6.83□□□□□ -1.32
TOPBP1-204ENST00000505804 RPS26P11Q5JNZ5 115 aaPredicted RBP6.83□□□□□ -1.32
TOPBP1-204ENST00000505804 LDLRAD1Q5T700 205 aa6.83□□□□□ -1.32
TOPBP1-204ENST00000505804 TPTE2Q6XPS3 522 aa6.83□□□□□ -1.32
TOPBP1-204ENST00000505804 GALNT11Q8NCW6 608 aa6.83□□□□□ -1.32
TOPBP1-204ENST00000505804 KLHDC7BQ96G42 594 aa6.83□□□□□ -1.32
TOPBP1-204ENST00000505804 SEC31BQ9NQW1 1179 aa6.83□□□□□ -1.32
TOPBP1-204ENST00000505804 SPDYE3A6NKU9 549 aa6.82□□□□□ -1.32
TOPBP1-204ENST00000505804 ARL4DP49703 201 aa6.82□□□□□ -1.32
TOPBP1-204ENST00000505804 RAC1P63000 192 aa6.82□□□□□ -1.32
TOPBP1-204ENST00000505804 PIP4K2BP78356 416 aa6.82□□□□□ -1.32
TOPBP1-204ENST00000505804 TAF1CQ15572 869 aaPredicted RBP6.82□□□□□ -1.32
TOPBP1-204ENST00000505804 FBXO11Q86XK2 927 aa6.82□□□□□ -1.32
TOPBP1-204ENST00000505804 FMR1NBQ8N0W7 255 aaPredicted RBP6.82□□□□□ -1.32
TOPBP1-204ENST00000505804 TMEM87AQ8NBN3 555 aa6.82□□□□□ -1.32
TOPBP1-204ENST00000505804 CRELD1Q96HD1 420 aa6.82□□□□□ -1.32
TOPBP1-204ENST00000505804 TTF2Q9UNY4 1162 aaKnown RBP6.82□□□□□ -1.32
TOPBP1-204ENST00000505804 USP31Q70CQ4 1352 aa6.82□□□□□ -1.32
TOPBP1-204ENST00000505804 DDX3YO15523 660 aaKnown RBP6.81□□□□□ -1.32
TOPBP1-204ENST00000505804 B3GALT4O96024 378 aa6.81□□□□□ -1.32
TOPBP1-204ENST00000505804 VAMP1P23763 118 aa6.81□□□□□ -1.32
TOPBP1-204ENST00000505804 COL8A1P27658 744 aa6.81□□□□□ -1.32
TOPBP1-204ENST00000505804 GSTM4Q03013 218 aa6.81□□□□□ -1.32
TOPBP1-204ENST00000505804 C19orf57Q0VDD7 668 aa6.81□□□□□ -1.32
TOPBP1-204ENST00000505804 DTWD1Q8N5C7 304 aa6.81□□□□□ -1.32
TOPBP1-204ENST00000505804 OSGEPQ9NPF4 335 aa6.81□□□□□ -1.32
TOPBP1-204ENST00000505804 NOP53Q9NZM5 478 aaKnown RBP6.81□□□□□ -1.32
TOPBP1-204ENST00000505804 STK17AQ9UEE5 414 aa6.81□□□□□ -1.32
TOPBP1-204ENST00000505804 GPN3Q9UHW5 284 aaPredicted RBP6.81□□□□□ -1.32
TOPBP1-204ENST00000505804 PPM1HQ9ULR3 514 aa6.81□□□□□ -1.32
TOPBP1-204ENST00000505804 E9PSI1 815 aa6.8□□□□□ -1.32
TOPBP1-204ENST00000505804 TM4SF5O14894 197 aa6.8□□□□□ -1.32
TOPBP1-204ENST00000505804 CD68P34810 354 aaPredicted RBP6.8□□□□□ -1.32
TOPBP1-204ENST00000505804 GRIK4Q16099 956 aa6.8□□□□□ -1.32
TOPBP1-204ENST00000505804 PRRT3Q5FWE3 981 aa6.8□□□□□ -1.32
TOPBP1-204ENST00000505804 MAP4K3Q8IVH8 894 aa6.8□□□□□ -1.32
TOPBP1-204ENST00000505804 KLHL23Q8NBE8 558 aa6.8□□□□□ -1.32
TOPBP1-204ENST00000505804 WNT8BQ93098 351 aa6.8□□□□□ -1.32
TOPBP1-204ENST00000505804 NECAB3Q96P71 396 aaPredicted RBP6.8□□□□□ -1.32
TOPBP1-204ENST00000505804 TMEM39AQ9NV64 488 aa6.8□□□□□ -1.32
TOPBP1-204ENST00000505804 KCNK4Q9NYG8 393 aa6.8□□□□□ -1.32
TOPBP1-204ENST00000505804 DLL1O00548 723 aa6.79□□□□□ -1.32
TOPBP1-204ENST00000505804 ENC1O14682 589 aa6.79□□□□□ -1.32
TOPBP1-204ENST00000505804 RECKO95980 971 aa6.79□□□□□ -1.32
TOPBP1-204ENST00000505804 SUZ12Q15022 739 aaKnown RBP6.79□□□□□ -1.32
TOPBP1-204ENST00000505804 CCDC85BQ15834 202 aaPredicted RBP6.79□□□□□ -1.32
TOPBP1-204ENST00000505804 ANKRD24Q8TF21 1146 aa6.79□□□□□ -1.32
TOPBP1-204ENST00000505804 CEP44Q9C0F1 390 aa6.79□□□□□ -1.32
TOPBP1-204ENST00000505804 SOX17Q9H6I2 414 aaPredicted RBP6.79□□□□□ -1.32
TOPBP1-204ENST00000505804 SRA1Q9HD15 236 aaKnown RBP6.79□□□□□ -1.32
TOPBP1-204ENST00000505804 ADAM11O75078 769 aa6.78□□□□□ -1.32
TOPBP1-204ENST00000505804 PAGE1O75459 146 aa6.78□□□□□ -1.32
TOPBP1-204ENST00000505804 ELNP15502 786 aa6.78□□□□□ -1.32
TOPBP1-204ENST00000505804 ST13P50502 369 aaKnown RBP6.78□□□□□ -1.32
TOPBP1-204ENST00000505804 NLRP12P59046 1061 aa6.78□□□□□ -1.32
TOPBP1-204ENST00000505804 PPP2R3AQ06190 1150 aa6.78□□□□□ -1.32
TOPBP1-204ENST00000505804 FOXD4L6Q3SYB3 417 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms