RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 JUNBP17275 347 aaPredicted RBP5.91□□□□□ -1.46
TRAPPC13-208ENST00000505553 EIF2AK2P19525 551 aaKnown RBP5.91□□□□□ -1.46
TRAPPC13-208ENST00000505553 INPP5BP32019 993 aa5.91□□□□□ -1.46
TRAPPC13-208ENST00000505553 ARSDP51689 593 aa5.91□□□□□ -1.46
TRAPPC13-208ENST00000505553 MLLT1Q03111 559 aaPredicted RBP5.91□□□□□ -1.46
TRAPPC13-208ENST00000505553 EHHADHQ08426 723 aa5.91□□□□□ -1.46
TRAPPC13-208ENST00000505553 C11orf91Q3C1V1 193 aa5.91□□□□□ -1.46
TRAPPC13-208ENST00000505553 FAM177A1Q8N128 213 aaPredicted RBP5.91□□□□□ -1.46
TRAPPC13-208ENST00000505553 IL22RA1Q8N6P7 574 aa5.91□□□□□ -1.46
TRAPPC13-208ENST00000505553 TMEM87AQ8NBN3 555 aa5.91□□□□□ -1.46
TRAPPC13-208ENST00000505553 ALKBH8Q96BT7 664 aaKnown RBP5.91□□□□□ -1.46
TRAPPC13-208ENST00000505553 SAP130Q9H0E3 1048 aa5.91□□□□□ -1.46
TRAPPC13-208ENST00000505553 C11orf16Q9NQ32 467 aa5.91□□□□□ -1.46
TRAPPC13-208ENST00000505553 PPP1R1BQ9UD71 204 aaPredicted RBP5.91□□□□□ -1.46
TRAPPC13-208ENST00000505553 PARP2Q9UGN5 583 aa5.91□□□□□ -1.46
TRAPPC13-208ENST00000505553 HMX2A2RU54 273 aa5.91□□□□□ -1.46
TRAPPC13-208ENST00000505553 FZD6O60353 706 aa5.91□□□□□ -1.46
TRAPPC13-208ENST00000505553 USP5P45974 858 aa5.91□□□□□ -1.46
TRAPPC13-208ENST00000505553 NRLP54845 237 aa5.91□□□□□ -1.46
TRAPPC13-208ENST00000505553 HDLBPQ00341 1268 aaKnown RBP5.91□□□□□ -1.46
TRAPPC13-208ENST00000505553 COX20Q5RI15 118 aa5.91□□□□□ -1.46
TRAPPC13-208ENST00000505553 KRT25Q7Z3Z0 450 aa5.91□□□□□ -1.46
TRAPPC13-208ENST00000505553 TMC4Q7Z404 712 aa5.91□□□□□ -1.46
TRAPPC13-208ENST00000505553 CACTIN-AS1Q8N1I8 211 aa5.91□□□□□ -1.46
TRAPPC13-208ENST00000505553 FAM129BQ96TA1 746 aa5.91□□□□□ -1.46
TRAPPC13-208ENST00000505553 MUC3BQ9H195 1237 aa5.91□□□□□ -1.46
TRAPPC13-208ENST00000505553 METTL5Q9NRN9 209 aaKnown RBP5.91□□□□□ -1.46
TRAPPC13-208ENST00000505553 CCDC87Q9NVE4 849 aa5.91□□□□□ -1.46
TRAPPC13-208ENST00000505553 RARAP10276 462 aa5.9□□□□□ -1.47
TRAPPC13-208ENST00000505553 BRD2P25440 801 aaKnown RBP5.9□□□□□ -1.47
TRAPPC13-208ENST00000505553 DAB2P98082 770 aa5.9□□□□□ -1.47
TRAPPC13-208ENST00000505553 PSMD2Q13200 908 aa5.9□□□□□ -1.47
TRAPPC13-208ENST00000505553 SETDB1Q15047 1291 aa5.9□□□□□ -1.47
TRAPPC13-208ENST00000505553 ALG1LQ6GMV1 187 aa5.9□□□□□ -1.47
TRAPPC13-208ENST00000505553 CLEC10AQ8IUN9 316 aa5.9□□□□□ -1.47
TRAPPC13-208ENST00000505553 SHKBP1Q8TBC3 707 aa5.9□□□□□ -1.47
TRAPPC13-208ENST00000505553 IFT43Q96FT9 208 aa5.9□□□□□ -1.47
TRAPPC13-208ENST00000505553 MYO19Q96H55 970 aa5.9□□□□□ -1.47
TRAPPC13-208ENST00000505553 DUSP9Q99956 384 aaKnown RBP5.9□□□□□ -1.47
TRAPPC13-208ENST00000505553 QTRT2Q9H974 415 aaKnown RBP5.9□□□□□ -1.47
TRAPPC13-208ENST00000505553 SASH3O75995 380 aa5.89□□□□□ -1.47
TRAPPC13-208ENST00000505553 TARSP26639 723 aaKnown RBP5.89□□□□□ -1.47
TRAPPC13-208ENST00000505553 GDF6Q6KF10 455 aaPredicted RBP5.89□□□□□ -1.47
TRAPPC13-208ENST00000505553 GIMAP7Q8NHV1 300 aa5.89□□□□□ -1.47
TRAPPC13-208ENST00000505553 PIK3R5Q8WYR1 880 aa5.89□□□□□ -1.47
TRAPPC13-208ENST00000505553 PLD4Q96BZ4 506 aa5.89□□□□□ -1.47
TRAPPC13-208ENST00000505553 FBXL18Q96ME1 805 aa5.89□□□□□ -1.47
TRAPPC13-208ENST00000505553 RBSNQ9H1K0 784 aa5.89□□□□□ -1.47
TRAPPC13-208ENST00000505553 ZFATQ9P243 1243 aa5.89□□□□□ -1.47
TRAPPC13-208ENST00000505553 VTI1BQ9UEU0 232 aa5.89□□□□□ -1.47
TRAPPC13-208ENST00000505553 TNFRSF10BO14763 440 aa5.88□□□□□ -1.47
TRAPPC13-208ENST00000505553 C9orf131Q5VYM1 1079 aa5.88□□□□□ -1.47
TRAPPC13-208ENST00000505553 HFE2Q6ZVN8 426 aa5.88□□□□□ -1.47
TRAPPC13-208ENST00000505553 CBLL1Q75N03 491 aa5.88□□□□□ -1.47
TRAPPC13-208ENST00000505553 RNF34Q969K3 372 aa5.88□□□□□ -1.47
TRAPPC13-208ENST00000505553 FAM46AQ96IP4 442 aaKnown RBP5.88□□□□□ -1.47
TRAPPC13-208ENST00000505553 MYRFLQ96LU7 910 aa5.88□□□□□ -1.47
TRAPPC13-208ENST00000505553 FAM83CQ9BQN1 747 aa5.88□□□□□ -1.47
TRAPPC13-208ENST00000505553 RTCBQ9Y3I0 505 aaKnown RBP5.88□□□□□ -1.47
TRAPPC13-208ENST00000505553 DBX1A6NMT0 343 aa5.87□□□□□ -1.47
TRAPPC13-208ENST00000505553 GPR182O15218 404 aa5.87□□□□□ -1.47
TRAPPC13-208ENST00000505553 GHRHP01286 108 aa5.87□□□□□ -1.47
TRAPPC13-208ENST00000505553 IGHA2P01877 340 aa5.87□□□□□ -1.47
TRAPPC13-208ENST00000505553 MZF1P28698 734 aaPredicted RBP5.87□□□□□ -1.47
TRAPPC13-208ENST00000505553 GRNP28799 593 aaKnown RBP5.87□□□□□ -1.47
TRAPPC13-208ENST00000505553 ACAD11Q709F0 780 aa5.87□□□□□ -1.47
TRAPPC13-208ENST00000505553 NT5DC4Q86YG4 428 aa5.87□□□□□ -1.47
TRAPPC13-208ENST00000505553 CMTR1Q8N1G2 835 aaKnown RBP5.87□□□□□ -1.47
TRAPPC13-208ENST00000505553 FRMD6Q96NE9 622 aa5.87□□□□□ -1.47
TRAPPC13-208ENST00000505553 TGIF2Q9GZN2 237 aa5.87□□□□□ -1.47
TRAPPC13-208ENST00000505553 PIM2Q9P1W9 311 aa5.87□□□□□ -1.47
TRAPPC13-208ENST00000505553 OPLAHO14841 1288 aa5.86□□□□□ -1.47
TRAPPC13-208ENST00000505553 NEFLP07196 543 aa5.86□□□□□ -1.47
TRAPPC13-208ENST00000505553 PCSK2P16519 638 aa5.86□□□□□ -1.47
TRAPPC13-208ENST00000505553 ITGB5P18084 799 aa5.86□□□□□ -1.47
TRAPPC13-208ENST00000505553 CDK11BP21127 795 aaKnown RBP5.86□□□□□ -1.47
TRAPPC13-208ENST00000505553 GNL2Q13823 731 aaKnown RBP5.86□□□□□ -1.47
TRAPPC13-208ENST00000505553 ENOX2Q16206 610 aaKnown RBP5.86□□□□□ -1.47
TRAPPC13-208ENST00000505553 LDLRAD1Q5T700 205 aa5.86□□□□□ -1.47
TRAPPC13-208ENST00000505553 METTL16Q86W50 562 aaKnown RBP5.86□□□□□ -1.47
TRAPPC13-208ENST00000505553 FBF1Q8TES7 1133 aa5.86□□□□□ -1.47
TRAPPC13-208ENST00000505553 FAM161BQ96MY7 647 aa5.86□□□□□ -1.47
TRAPPC13-208ENST00000505553 KRTAP17-1Q9BYP8 105 aa5.86□□□□□ -1.47
TRAPPC13-208ENST00000505553 NIF3L1Q9GZT8 377 aa5.86□□□□□ -1.47
TRAPPC13-208ENST00000505553 LRFN2Q9ULH4 789 aa5.86□□□□□ -1.47
TRAPPC13-208ENST00000505553 CDK11AQ9UQ88 783 aaPredicted RBP5.86□□□□□ -1.47
TRAPPC13-208ENST00000505553 PNMA6FA0A0J9YX94 578 aa5.85□□□□□ -1.47
TRAPPC13-208ENST00000505553 WDR64B1ANS9 1081 aa5.85□□□□□ -1.47
TRAPPC13-208ENST00000505553 XYLBO75191 536 aa5.85□□□□□ -1.47
TRAPPC13-208ENST00000505553 ZNF76P36508 570 aa5.85□□□□□ -1.47
TRAPPC13-208ENST00000505553 FANCCQ00597 558 aa5.85□□□□□ -1.47
TRAPPC13-208ENST00000505553 RAD51AP2Q09MP3 1159 aa5.85□□□□□ -1.47
TRAPPC13-208ENST00000505553 VSIG10LQ86VR7 867 aa5.85□□□□□ -1.47
TRAPPC13-208ENST00000505553 TREML1Q86YW5 311 aa5.85□□□□□ -1.47
TRAPPC13-208ENST00000505553 TP53INP2Q8IXH6 220 aa5.85□□□□□ -1.47
TRAPPC13-208ENST00000505553 GJD3Q8N144 294 aa5.85□□□□□ -1.47
TRAPPC13-208ENST00000505553 SLC43A3Q8NBI5 491 aa5.85□□□□□ -1.47
TRAPPC13-208ENST00000505553 TTC16Q8NEE8 873 aa5.85□□□□□ -1.47
TRAPPC13-208ENST00000505553 SPATA32Q96LK8 384 aa5.85□□□□□ -1.47
TRAPPC13-208ENST00000505553 TANGO6Q9C0B7 1094 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms