RNA–Protein interactions for RNA: ENST00000505108.1

TRAPPC13-207, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-207ENST00000505108 PPP4R2Q9NY27 417 aa9.79□□□□□ -0.84
TRAPPC13-207ENST00000505108 LINC01387J3KSC0 135 aa9.78□□□□□ -0.84
TRAPPC13-207ENST00000505108 GSTT1P30711 240 aa9.78□□□□□ -0.84
TRAPPC13-207ENST00000505108 HGSNATQ68CP4 663 aa9.78□□□□□ -0.84
TRAPPC13-207ENST00000505108 PPME1Q9Y570 386 aa9.78□□□□□ -0.84
TRAPPC13-207ENST00000505108 PTPN12Q05209 780 aaKnown RBP9.77□□□□□ -0.85
TRAPPC13-207ENST00000505108 FAAP100Q0VG06 881 aa9.77□□□□□ -0.85
TRAPPC13-207ENST00000505108 ZNF423Q2M1K9 1284 aa9.77□□□□□ -0.85
TRAPPC13-207ENST00000505108 MEI1Q5TIA1 1274 aa9.77□□□□□ -0.85
TRAPPC13-207ENST00000505108 CACTIN-AS1Q8N1I8 211 aa9.77□□□□□ -0.85
TRAPPC13-207ENST00000505108 PLVAPQ9BX97 442 aa9.77□□□□□ -0.85
TRAPPC13-207ENST00000505108 MKL2Q9ULH7 1088 aa9.77□□□□□ -0.85
TRAPPC13-207ENST00000505108 AKAP2Q9Y2D5 859 aa9.77□□□□□ -0.85
TRAPPC13-207ENST00000505108 GNB5O14775 395 aa9.76□□□□□ -0.85
TRAPPC13-207ENST00000505108 PCDH1Q08174 1060 aa9.76□□□□□ -0.85
TRAPPC13-207ENST00000505108 TRAPPC3LQ5T215 181 aa9.76□□□□□ -0.85
TRAPPC13-207ENST00000505108 BACH2Q9BYV9 841 aa9.76□□□□□ -0.85
TRAPPC13-207ENST00000505108 CLEC4MQ9H2X3 399 aaPredicted RBP9.76□□□□□ -0.85
TRAPPC13-207ENST00000505108 H3BRJ5 948 aa9.75□□□□□ -0.85
TRAPPC13-207ENST00000505108 SOX1O00570 391 aaPredicted RBP9.75□□□□□ -0.85
TRAPPC13-207ENST00000505108 DEAF1O75398 565 aaPredicted RBP9.75□□□□□ -0.85
TRAPPC13-207ENST00000505108 RECKO95980 971 aa9.75□□□□□ -0.85
TRAPPC13-207ENST00000505108 ESRRAP11474 423 aaPredicted RBP9.75□□□□□ -0.85
TRAPPC13-207ENST00000505108 XRCC5P13010 732 aaKnown RBP9.75□□□□□ -0.85
TRAPPC13-207ENST00000505108 SETDB1Q15047 1291 aa9.75□□□□□ -0.85
TRAPPC13-207ENST00000505108 CARD10Q9BWT7 1032 aa9.75□□□□□ -0.85
TRAPPC13-207ENST00000505108 TM4SF5O14894 197 aa9.74□□□□□ -0.85
TRAPPC13-207ENST00000505108 FBXO24O75426 580 aa9.74□□□□□ -0.85
TRAPPC13-207ENST00000505108 VAMP1P23763 118 aa9.74□□□□□ -0.85
TRAPPC13-207ENST00000505108 IKBKEQ14164 716 aa9.74□□□□□ -0.85
TRAPPC13-207ENST00000505108 CRELD1Q96HD1 420 aa9.74□□□□□ -0.85
TRAPPC13-207ENST00000505108 A0A0A0MRY4 1105 aa9.73□□□□□ -0.85
TRAPPC13-207ENST00000505108 FAM177BA6PVY3 158 aa9.73□□□□□ -0.85
TRAPPC13-207ENST00000505108 FAM229AH3BQW9 127 aa9.73□□□□□ -0.85
TRAPPC13-207ENST00000505108 ZNF157P51786 506 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC13-207ENST00000505108 CABP4P57796 275 aa9.73□□□□□ -0.85
TRAPPC13-207ENST00000505108 TSNAXIP1Q2TAA8 658 aa9.73□□□□□ -0.85
TRAPPC13-207ENST00000505108 RPS26P11Q5JNZ5 115 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC13-207ENST00000505108 BEND7Q8N7W2 519 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC13-207ENST00000505108 GALNT11Q8NCW6 608 aa9.73□□□□□ -0.85
TRAPPC13-207ENST00000505108 SEC31BQ9NQW1 1179 aa9.73□□□□□ -0.85
TRAPPC13-207ENST00000505108 FSCN2O14926 492 aa9.72□□□□□ -0.85
TRAPPC13-207ENST00000505108 TPTE2Q6XPS3 522 aa9.72□□□□□ -0.85
TRAPPC13-207ENST00000505108 PODNQ7Z5L7 613 aa9.72□□□□□ -0.85
TRAPPC13-207ENST00000505108 SLC7A3Q8WY07 619 aa9.72□□□□□ -0.85
TRAPPC13-207ENST00000505108 B3GALT4O96024 378 aa9.71□□□□□ -0.86
TRAPPC13-207ENST00000505108 COL8A1P27658 744 aa9.71□□□□□ -0.86
TRAPPC13-207ENST00000505108 BCL11AQ9H165 835 aa9.71□□□□□ -0.86
TRAPPC13-207ENST00000505108 PPM1HQ9ULR3 514 aa9.71□□□□□ -0.86
TRAPPC13-207ENST00000505108 TTF2Q9UNY4 1162 aaKnown RBP9.71□□□□□ -0.86
TRAPPC13-207ENST00000505108 USP31Q70CQ4 1352 aa9.71□□□□□ -0.86
TRAPPC13-207ENST00000505108 PIP4K2BP78356 416 aa9.7□□□□□ -0.86
TRAPPC13-207ENST00000505108 TAF1CQ15572 869 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC13-207ENST00000505108 FMR1NBQ8N0W7 255 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC13-207ENST00000505108 ANKRD24Q8TF21 1146 aa9.7□□□□□ -0.86
TRAPPC13-207ENST00000505108 KLHDC7BQ96G42 594 aa9.7□□□□□ -0.86
TRAPPC13-207ENST00000505108 ZFYVE1Q9HBF4 777 aa9.7□□□□□ -0.86
TRAPPC13-207ENST00000505108 FAM117BQ6P1L5 589 aa9.69□□□□□ -0.86
TRAPPC13-207ENST00000505108 DTWD1Q8N5C7 304 aa9.69□□□□□ -0.86
TRAPPC13-207ENST00000505108 TMEM87AQ8NBN3 555 aa9.69□□□□□ -0.86
TRAPPC13-207ENST00000505108 SCARF2Q96GP6 870 aaPredicted RBP9.69□□□□□ -0.86
TRAPPC13-207ENST00000505108 NECAB3Q96P71 396 aaPredicted RBP9.69□□□□□ -0.86
TRAPPC13-207ENST00000505108 KCNK4Q9NYG8 393 aa9.69□□□□□ -0.86
TRAPPC13-207ENST00000505108 GPN3Q9UHW5 284 aaPredicted RBP9.69□□□□□ -0.86
TRAPPC13-207ENST00000505108 ENC1O14682 589 aa9.68□□□□□ -0.86
TRAPPC13-207ENST00000505108 DDX3YO15523 660 aaKnown RBP9.68□□□□□ -0.86
TRAPPC13-207ENST00000505108 CELA3AP09093 270 aa9.68□□□□□ -0.86
TRAPPC13-207ENST00000505108 ITGAEP38570 1179 aa9.68□□□□□ -0.86
TRAPPC13-207ENST00000505108 C19orf57Q0VDD7 668 aa9.68□□□□□ -0.86
TRAPPC13-207ENST00000505108 FBXO11Q86XK2 927 aa9.68□□□□□ -0.86
TRAPPC13-207ENST00000505108 WNT8BQ93098 351 aa9.68□□□□□ -0.86
TRAPPC13-207ENST00000505108 TRIM56Q9BRZ2 755 aaKnown RBP9.68□□□□□ -0.86
TRAPPC13-207ENST00000505108 E9PSI1 815 aa9.67□□□□□ -0.86
TRAPPC13-207ENST00000505108 PIK3R2O00459 728 aa9.67□□□□□ -0.86
TRAPPC13-207ENST00000505108 DLL1O00548 723 aa9.67□□□□□ -0.86
TRAPPC13-207ENST00000505108 ADAM11O75078 769 aa9.67□□□□□ -0.86
TRAPPC13-207ENST00000505108 PAGE1O75459 146 aa9.67□□□□□ -0.86
TRAPPC13-207ENST00000505108 ST13P50502 369 aaKnown RBP9.67□□□□□ -0.86
TRAPPC13-207ENST00000505108 RAC1P63000 192 aa9.67□□□□□ -0.86
TRAPPC13-207ENST00000505108 GSTM4Q03013 218 aa9.67□□□□□ -0.86
TRAPPC13-207ENST00000505108 TRIM28Q13263 835 aaKnown RBP9.67□□□□□ -0.86
TRAPPC13-207ENST00000505108 FOXD4L6Q3SYB3 417 aaPredicted RBP9.67□□□□□ -0.86
TRAPPC13-207ENST00000505108 FOXD4L3Q6VB84 417 aaPredicted RBP9.67□□□□□ -0.86
TRAPPC13-207ENST00000505108 STK35Q8TDR2 534 aa9.67□□□□□ -0.86
TRAPPC13-207ENST00000505108 SOX17Q9H6I2 414 aaPredicted RBP9.67□□□□□ -0.86
TRAPPC13-207ENST00000505108 OSGEPQ9NPF4 335 aa9.67□□□□□ -0.86
TRAPPC13-207ENST00000505108 TMEM39AQ9NV64 488 aa9.67□□□□□ -0.86
TRAPPC13-207ENST00000505108 STK17AQ9UEE5 414 aa9.67□□□□□ -0.86
TRAPPC13-207ENST00000505108 FAM181BA6NEQ2 426 aa9.66□□□□□ -0.86
TRAPPC13-207ENST00000505108 CCDC85BQ15834 202 aaPredicted RBP9.66□□□□□ -0.86
TRAPPC13-207ENST00000505108 NPM2Q86SE8 214 aaKnown RBP9.66□□□□□ -0.86
TRAPPC13-207ENST00000505108 MAP4K3Q8IVH8 894 aa9.66□□□□□ -0.86
TRAPPC13-207ENST00000505108 KLHL23Q8NBE8 558 aa9.66□□□□□ -0.86
TRAPPC13-207ENST00000505108 NRSN2Q9GZP1 204 aa9.66□□□□□ -0.86
TRAPPC13-207ENST00000505108 SRA1Q9HD15 236 aaKnown RBP9.66□□□□□ -0.86
TRAPPC13-207ENST00000505108 NOP53Q9NZM5 478 aaKnown RBP9.66□□□□□ -0.86
TRAPPC13-207ENST00000505108 SPDYE3A6NKU9 549 aa9.65□□□□□ -0.86
TRAPPC13-207ENST00000505108 CD68P34810 354 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC13-207ENST00000505108 NLRP12P59046 1061 aa9.65□□□□□ -0.86
TRAPPC13-207ENST00000505108 GRIK4Q16099 956 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms