RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 PDE1AP54750 535 aa12.53□□□□□ -0.4
RFC1-210ENST00000505077 TTC39AQ5SRH9 613 aa12.53□□□□□ -0.4
RFC1-210ENST00000505077 PODNQ7Z5L7 613 aa12.53□□□□□ -0.4
RFC1-210ENST00000505077 PELP1Q8IZL8 1130 aaKnown RBP12.53□□□□□ -0.4
RFC1-210ENST00000505077 LARGE2Q8N3Y3 721 aa12.53□□□□□ -0.4
RFC1-210ENST00000505077 ZC3H4Q9UPT8 1303 aaKnown RBP12.53□□□□□ -0.4
RFC1-210ENST00000505077 FOCADQ5VW36 1801 aa12.53□□□□□ -0.4
RFC1-210ENST00000505077 G3V3G9 751 aa12.52□□□□□ -0.41
RFC1-210ENST00000505077 PHKA1P46020 1223 aa12.52□□□□□ -0.41
RFC1-210ENST00000505077 GYG1P46976 350 aa12.52□□□□□ -0.41
RFC1-210ENST00000505077 AOC3Q16853 763 aa12.52□□□□□ -0.41
RFC1-210ENST00000505077 DCAF8Q5TAQ9 597 aa12.52□□□□□ -0.41
RFC1-210ENST00000505077 ARHGAP27Q6ZUM4 889 aa12.52□□□□□ -0.41
RFC1-210ENST00000505077 TXNRD3Q86VQ6 643 aa12.52□□□□□ -0.41
RFC1-210ENST00000505077 PLEKHM2Q8IWE5 1019 aa12.52□□□□□ -0.41
RFC1-210ENST00000505077 NIM1KQ8IY84 436 aa12.52□□□□□ -0.41
RFC1-210ENST00000505077 JDP2Q8WYK2 163 aa12.52□□□□□ -0.41
RFC1-210ENST00000505077 ZNF277Q9NRM2 450 aaPredicted RBP12.52□□□□□ -0.41
RFC1-210ENST00000505077 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.52□□□□□ -0.41
RFC1-210ENST00000505077 DENND2AQ9ULE3 1009 aa12.52□□□□□ -0.41
RFC1-210ENST00000505077 COL1A1P02452 1464 aaPredicted RBP12.52□□□□□ -0.41
RFC1-210ENST00000505077 WTIPA6NIX2 430 aaPredicted RBP12.51□□□□□ -0.41
RFC1-210ENST00000505077 PDE4AP27815 886 aa12.51□□□□□ -0.41
RFC1-210ENST00000505077 BCAMP50895 628 aa12.51□□□□□ -0.41
RFC1-210ENST00000505077 TPRNQ4KMQ1 711 aa12.51□□□□□ -0.41
RFC1-210ENST00000505077 TICAM2Q86XR7 235 aa12.51□□□□□ -0.41
RFC1-210ENST00000505077 ZGPATQ8N5A5 531 aaKnown RBP12.51□□□□□ -0.41
RFC1-210ENST00000505077 TDRD7Q8NHU6 1098 aaKnown RBP12.51□□□□□ -0.41
RFC1-210ENST00000505077 PI4K2BQ8TCG2 481 aa12.51□□□□□ -0.41
RFC1-210ENST00000505077 OTUD7AQ8TE49 926 aaPredicted RBP12.51□□□□□ -0.41
RFC1-210ENST00000505077 TBC1D22AQ8WUA7 517 aa12.51□□□□□ -0.41
RFC1-210ENST00000505077 BBXQ8WY36 941 aaPredicted RBP12.51□□□□□ -0.41
RFC1-210ENST00000505077 CD209Q9NNX6 404 aa12.51□□□□□ -0.41
RFC1-210ENST00000505077 RIMBP2O15034 1052 aa12.5□□□□□ -0.41
RFC1-210ENST00000505077 ECE2O60344 883 aa12.5□□□□□ -0.41
RFC1-210ENST00000505077 FRAT2O75474 233 aaPredicted RBP12.5□□□□□ -0.41
RFC1-210ENST00000505077 RASSF7Q02833 373 aa12.5□□□□□ -0.41
RFC1-210ENST00000505077 RASGRF1Q13972 1273 aa12.5□□□□□ -0.41
RFC1-210ENST00000505077 TMED8Q6PL24 325 aaPredicted RBP12.5□□□□□ -0.41
RFC1-210ENST00000505077 C16orf71Q8IYS4 520 aaPredicted RBP12.5□□□□□ -0.41
RFC1-210ENST00000505077 SPATA5Q8NB90 893 aa12.5□□□□□ -0.41
RFC1-210ENST00000505077 GPR101Q96P66 508 aaPredicted RBP12.5□□□□□ -0.41
RFC1-210ENST00000505077 HAUS7Q99871 368 aa12.5□□□□□ -0.41
RFC1-210ENST00000505077 ZNRF3Q9ULT6 936 aa12.5□□□□□ -0.41
RFC1-210ENST00000505077 FAM205AQ6ZU69 1335 aa12.5□□□□□ -0.41
RFC1-210ENST00000505077 SALL1Q9NSC2 1324 aa12.5□□□□□ -0.41
RFC1-210ENST00000505077 RFX7Q2KHR2 1363 aa12.5□□□□□ -0.41
RFC1-210ENST00000505077 MYO3BQ8WXR4 1341 aa12.49□□□□□ -0.41
RFC1-210ENST00000505077 MCAMP43121 646 aa12.49□□□□□ -0.41
RFC1-210ENST00000505077 FKBP1AP62942 108 aaKnown RBP12.49□□□□□ -0.41
RFC1-210ENST00000505077 TTF1Q15361 905 aaPredicted RBP12.49□□□□□ -0.41
RFC1-210ENST00000505077 TTC22Q5TAA0 569 aa12.49□□□□□ -0.41
RFC1-210ENST00000505077 STRIP1Q5VSL9 837 aa12.49□□□□□ -0.41
RFC1-210ENST00000505077 WDR66Q8TBY9 1149 aa12.49□□□□□ -0.41
RFC1-210ENST00000505077 BCL11AQ9H165 835 aa12.49□□□□□ -0.41
RFC1-210ENST00000505077 SUGT1Q9Y2Z0 365 aa12.49□□□□□ -0.41
RFC1-210ENST00000505077 BMP2KLQ5H9B9 411 aa12.48□□□□□ -0.41
RFC1-210ENST00000505077 DBNDD1Q9H9R9 158 aa12.48□□□□□ -0.41
RFC1-210ENST00000505077 HMG20BQ9P0W2 317 aa12.48□□□□□ -0.41
RFC1-210ENST00000505077 ADAMTSL1Q8N6G6 1762 aa12.48□□□□□ -0.41
RFC1-210ENST00000505077 USP17L3A6NCW0 530 aa12.47□□□□□ -0.41
RFC1-210ENST00000505077 USP17L4A6NCW7 530 aa12.47□□□□□ -0.41
RFC1-210ENST00000505077 FZD9O00144 591 aa12.47□□□□□ -0.41
RFC1-210ENST00000505077 MMP14P50281 582 aa12.47□□□□□ -0.41
RFC1-210ENST00000505077 DOK7Q18PE1 504 aa12.47□□□□□ -0.41
RFC1-210ENST00000505077 LRRFIP1Q32MZ4 808 aaKnown RBP12.47□□□□□ -0.41
RFC1-210ENST00000505077 SPTY2D1Q68D10 685 aaPredicted RBP12.47□□□□□ -0.41
RFC1-210ENST00000505077 USP17L1Q7RTZ2 530 aa12.47□□□□□ -0.41
RFC1-210ENST00000505077 PAG1Q9NWQ8 432 aa12.47□□□□□ -0.41
RFC1-210ENST00000505077 WDR90Q96KV7 1748 aa12.47□□□□□ -0.41
RFC1-210ENST00000505077 MAST3O60307 1309 aa12.46□□□□□ -0.41
RFC1-210ENST00000505077 RGS3P49796 1198 aa12.46□□□□□ -0.41
RFC1-210ENST00000505077 PRELPP51888 382 aa12.46□□□□□ -0.41
RFC1-210ENST00000505077 EIF6P56537 245 aaKnown RBP12.46□□□□□ -0.41
RFC1-210ENST00000505077 SCARF1Q14162 830 aa12.46□□□□□ -0.41
RFC1-210ENST00000505077 TNIP1Q15025 636 aa12.46□□□□□ -0.41
RFC1-210ENST00000505077 TSHZ3Q63HK5 1081 aa12.46□□□□□ -0.41
RFC1-210ENST00000505077 CNTROBQ8N137 903 aa12.46□□□□□ -0.41
RFC1-210ENST00000505077 EVI5LQ96CN4 794 aa12.46□□□□□ -0.41
RFC1-210ENST00000505077 BOLA2Q9H3K6 86 aa12.46□□□□□ -0.41
RFC1-210ENST00000505077 RNF181Q9P0P0 153 aa12.46□□□□□ -0.41
RFC1-210ENST00000505077 NAV1Q8NEY1 1877 aa12.46□□□□□ -0.42
RFC1-210ENST00000505077 YDJCA8MPS7 323 aa12.45□□□□□ -0.42
RFC1-210ENST00000505077 RPS12P25398 132 aaKnown RBP12.45□□□□□ -0.42
RFC1-210ENST00000505077 MFSD14BQ5SR56 506 aa12.45□□□□□ -0.42
RFC1-210ENST00000505077 TTLL5Q6EMB2 1281 aa12.45□□□□□ -0.42
RFC1-210ENST00000505077 CIAPIN1Q6FI81 312 aa12.45□□□□□ -0.42
RFC1-210ENST00000505077 KBTBD3Q8NAB2 608 aa12.45□□□□□ -0.42
RFC1-210ENST00000505077 DNAJC2Q99543 621 aaKnown RBP12.45□□□□□ -0.42
RFC1-210ENST00000505077 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.45□□□□□ -0.421e-6■■■■□ 21.2
RFC1-210ENST00000505077 IQSEC3Q9UPP2 1182 aaPredicted RBP12.45□□□□□ -0.42
RFC1-210ENST00000505077 LAMA4Q16363 1823 aa12.45□□□□□ -0.42
RFC1-210ENST00000505077 LAMB1P07942 1786 aa12.45□□□□□ -0.42
RFC1-210ENST00000505077 MYH1P12882 1939 aa12.45□□□□□ -0.42
RFC1-210ENST00000505077 MYH8P13535 1937 aa12.45□□□□□ -0.42
RFC1-210ENST00000505077 GOLIM4O00461 696 aa12.44□□□□□ -0.42
RFC1-210ENST00000505077 CYP2E1P05181 493 aaPredicted RBP12.44□□□□□ -0.42
RFC1-210ENST00000505077 ZFYP08048 801 aaPredicted RBP12.44□□□□□ -0.42
RFC1-210ENST00000505077 VIL1P09327 827 aaKnown RBP12.44□□□□□ -0.42
RFC1-210ENST00000505077 ZAP70P43403 619 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms