RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 AGBL3Q8NEM8 1001 aa10.21□□□□□ -0.77
CDC42SE2-208ENST00000505065 RPAP1Q9BWH6 1393 aaPredicted RBP10.21□□□□□ -0.78
CDC42SE2-208ENST00000505065 SNAP23O00161 211 aa10.21□□□□□ -0.78
CDC42SE2-208ENST00000505065 SCARF1Q14162 830 aa10.21□□□□□ -0.78
CDC42SE2-208ENST00000505065 DBNDD2Q9BQY9 259 aa10.21□□□□□ -0.78
CDC42SE2-208ENST00000505065 PHKA1P46020 1223 aa10.21□□□□□ -0.78
CDC42SE2-208ENST00000505065 RASGRF1Q13972 1273 aa10.21□□□□□ -0.78
CDC42SE2-208ENST00000505065 ZNF804AQ7Z570 1209 aa10.21□□□□□ -0.78
CDC42SE2-208ENST00000505065 ZNF277Q9NRM2 450 aaPredicted RBP10.21□□□□□ -0.78
CDC42SE2-208ENST00000505065 UQCRFS1P1P0C7P4 283 aa10.2□□□□□ -0.78
CDC42SE2-208ENST00000505065 HMG20BQ9P0W2 317 aa10.2□□□□□ -0.78
CDC42SE2-208ENST00000505065 BAZ2AQ9UIF9 1905 aaKnown RBP10.2□□□□□ -0.78
CDC42SE2-208ENST00000505065 SIL1Q9H173 461 aa10.2□□□□□ -0.78
CDC42SE2-208ENST00000505065 IFIT1P09914 478 aaKnown RBP10.2□□□□□ -0.78
CDC42SE2-208ENST00000505065 HIBADHP31937 336 aaKnown RBP10.2□□□□□ -0.78
CDC42SE2-208ENST00000505065 SCNN1DP51172 638 aa10.2□□□□□ -0.78
CDC42SE2-208ENST00000505065 TIMM10P62072 90 aa10.19□□□□□ -0.78
CDC42SE2-208ENST00000505065 DENND2AQ9ULE3 1009 aa10.19□□□□□ -0.78
CDC42SE2-208ENST00000505065 NSFL1CQ9UNZ2 370 aaKnown RBP10.19□□□□□ -0.78
CDC42SE2-208ENST00000505065 NPM3O75607 178 aaKnown RBP10.19□□□□□ -0.78
CDC42SE2-208ENST00000505065 MAP4K4O95819 1239 aaPredicted RBP10.19□□□□□ -0.78
CDC42SE2-208ENST00000505065 BCAMP50895 628 aa10.19□□□□□ -0.78
CDC42SE2-208ENST00000505065 PDE1AP54750 535 aa10.19□□□□□ -0.78
CDC42SE2-208ENST00000505065 RSBN1LQ6PCB5 846 aaPredicted RBP10.19□□□□□ -0.78
CDC42SE2-208ENST00000505065 HELBQ8NG08 1087 aaPredicted RBP10.19□□□□□ -0.78
CDC42SE2-208ENST00000505065 CXCL9Q07325 125 aa10.19□□□□□ -0.78
CDC42SE2-208ENST00000505065 GPR101Q96P66 508 aaPredicted RBP10.19□□□□□ -0.78
CDC42SE2-208ENST00000505065 SSC5DA1L4H1 1573 aa10.19□□□□□ -0.78
CDC42SE2-208ENST00000505065 A0A0G2JMZ2 1700 aa10.19□□□□□ -0.78
CDC42SE2-208ENST00000505065 NPHP1O15259 732 aa10.19□□□□□ -0.78
CDC42SE2-208ENST00000505065 CYP2E1P05181 493 aaPredicted RBP10.19□□□□□ -0.78
CDC42SE2-208ENST00000505065 GYG1P46976 350 aa10.19□□□□□ -0.78
CDC42SE2-208ENST00000505065 ANKIB1Q9P2G1 1089 aa10.19□□□□□ -0.78
CDC42SE2-208ENST00000505065 GLTPD2A6NH11 291 aa10.18□□□□□ -0.78
CDC42SE2-208ENST00000505065 C9orf131Q5VYM1 1079 aa10.18□□□□□ -0.78
CDC42SE2-208ENST00000505065 OTUD7AQ8TE49 926 aaPredicted RBP10.18□□□□□ -0.78
CDC42SE2-208ENST00000505065 KCNQ5Q9NR82 932 aa10.18□□□□□ -0.78
CDC42SE2-208ENST00000505065 CHMP3Q9Y3E7 222 aa10.18□□□□□ -0.78
CDC42SE2-208ENST00000505065 ATRNL1Q5VV63 1379 aa10.18□□□□□ -0.78
CDC42SE2-208ENST00000505065 TAF7LQ5H9L4 462 aa10.18□□□□□ -0.78
CDC42SE2-208ENST00000505065 USP17L3A6NCW0 530 aa10.18□□□□□ -0.78
CDC42SE2-208ENST00000505065 USP17L4A6NCW7 530 aa10.18□□□□□ -0.78
CDC42SE2-208ENST00000505065 SMARCA5O60264 1052 aaPredicted RBP10.18□□□□□ -0.78
CDC42SE2-208ENST00000505065 IRX6P78412 446 aaPredicted RBP10.18□□□□□ -0.78
CDC42SE2-208ENST00000505065 USP17L1Q7RTZ2 530 aa10.18□□□□□ -0.78
CDC42SE2-208ENST00000505065 CLASRPQ8N2M8 674 aaKnown RBP10.18□□□□□ -0.78
CDC42SE2-208ENST00000505065 TBC1D22AQ8WUA7 517 aa10.18□□□□□ -0.78
CDC42SE2-208ENST00000505065 ECHDC1Q9NTX5 307 aa10.18□□□□□ -0.78
CDC42SE2-208ENST00000505065 GSPT1P15170 499 aaKnown RBP10.17□□□□□ -0.78
CDC42SE2-208ENST00000505065 SPATA5Q8NB90 893 aa10.17□□□□□ -0.78
CDC42SE2-208ENST00000505065 PITPNM2Q9BZ72 1349 aa10.17□□□□□ -0.78
CDC42SE2-208ENST00000505065 PPIP5K2O43314 1243 aa10.17□□□□□ -0.78
CDC42SE2-208ENST00000505065 MX1P20591 662 aa10.17□□□□□ -0.78
CDC42SE2-208ENST00000505065 C16orf71Q8IYS4 520 aaPredicted RBP10.17□□□□□ -0.78
CDC42SE2-208ENST00000505065 PSMD14O00487 310 aa10.17□□□□□ -0.78
CDC42SE2-208ENST00000505065 GRIK5Q16478 980 aa10.17□□□□□ -0.78
CDC42SE2-208ENST00000505065 AACSQ86V21 672 aa10.17□□□□□ -0.78
CDC42SE2-208ENST00000505065 IL17RAQ96F46 866 aa10.17□□□□□ -0.78
CDC42SE2-208ENST00000505065 SERPINA10Q9UK55 444 aa10.17□□□□□ -0.78
CDC42SE2-208ENST00000505065 ZMYM6O95789 1325 aa10.17□□□□□ -0.78
CDC42SE2-208ENST00000505065 HHIPL2Q6UWX4 724 aa10.17□□□□□ -0.78
CDC42SE2-208ENST00000505065 PPP4CP60510 307 aa10.16□□□□□ -0.78
CDC42SE2-208ENST00000505065 WDR66Q8TBY9 1149 aa10.16□□□□□ -0.78
CDC42SE2-208ENST00000505065 ZC3H12CQ9C0D7 883 aaKnown RBP10.16□□□□□ -0.78
CDC42SE2-208ENST00000505065 MKRN1Q9UHC7 482 aaKnown RBP10.16□□□□□ -0.78
CDC42SE2-208ENST00000505065 TAOK2Q9UL54 1235 aa10.16□□□□□ -0.78
CDC42SE2-208ENST00000505065 CAVIN4Q5BKX8 364 aa10.16□□□□□ -0.78
CDC42SE2-208ENST00000505065 TTC22Q5TAA0 569 aa10.16□□□□□ -0.78
CDC42SE2-208ENST00000505065 ARHGAP27Q6ZUM4 889 aa10.16□□□□□ -0.78
CDC42SE2-208ENST00000505065 NIM1KQ8IY84 436 aa10.16□□□□□ -0.78
CDC42SE2-208ENST00000505065 ZDHHC15Q96MV8 337 aa10.16□□□□□ -0.78
CDC42SE2-208ENST00000505065 METTL16Q86W50 562 aaKnown RBP10.16□□□□□ -0.78
CDC42SE2-208ENST00000505065 NSUN4Q96CB9 384 aaKnown RBP10.16□□□□□ -0.78
CDC42SE2-208ENST00000505065 GPRC5DQ9NZD1 345 aa10.16□□□□□ -0.78
CDC42SE2-208ENST00000505065 TNIP1Q15025 636 aa10.15□□□□□ -0.78
CDC42SE2-208ENST00000505065 PIH1D3Q9NQM4 214 aaKnown RBP10.15□□□□□ -0.78
CDC42SE2-208ENST00000505065 MAP3K10Q02779 954 aa10.15□□□□□ -0.78
CDC42SE2-208ENST00000505065 GLRX3O76003 335 aaKnown RBP10.15□□□□□ -0.78
CDC42SE2-208ENST00000505065 FKBP1CQ5VVH2 108 aa10.15□□□□□ -0.78
CDC42SE2-208ENST00000505065 IL1RAPL2Q9NP60 686 aa10.15□□□□□ -0.78
CDC42SE2-208ENST00000505065 RLFQ13129 1914 aa10.15□□□□□ -0.79
CDC42SE2-208ENST00000505065 ROBO3Q96MS0 1386 aa10.15□□□□□ -0.79
CDC42SE2-208ENST00000505065 FOXP2O15409 715 aa10.14□□□□□ -0.79
CDC42SE2-208ENST00000505065 BMP2KLQ5H9B9 411 aa10.14□□□□□ -0.79
CDC42SE2-208ENST00000505065 CIAPIN1Q6FI81 312 aa10.14□□□□□ -0.79
CDC42SE2-208ENST00000505065 CNTNAP1P78357 1384 aa10.14□□□□□ -0.79
CDC42SE2-208ENST00000505065 LARGE2Q8N3Y3 721 aa10.14□□□□□ -0.79
CDC42SE2-208ENST00000505065 ZGPATQ8N5A5 531 aaKnown RBP10.14□□□□□ -0.79
CDC42SE2-208ENST00000505065 CCDC8Q9H0W5 538 aaPredicted RBP10.14□□□□□ -0.79
CDC42SE2-208ENST00000505065 DBNDD1Q9H9R9 158 aa10.14□□□□□ -0.79
CDC42SE2-208ENST00000505065 GPR75-ASB3A0A0A6YYF3 556 aa10.14□□□□□ -0.79
CDC42SE2-208ENST00000505065 C6orf229H3BNL8 230 aa10.14□□□□□ -0.79
CDC42SE2-208ENST00000505065 GPR162Q16538 588 aa10.14□□□□□ -0.79
CDC42SE2-208ENST00000505065 KBTBD3Q8NAB2 608 aa10.14□□□□□ -0.79
CDC42SE2-208ENST00000505065 RNF181Q9P0P0 153 aa10.14□□□□□ -0.79
CDC42SE2-208ENST00000505065 ADD2P35612 726 aa10.13□□□□□ -0.79
CDC42SE2-208ENST00000505065 TTF1Q15361 905 aaPredicted RBP10.13□□□□□ -0.79
CDC42SE2-208ENST00000505065 UBE3CQ15386 1083 aa10.13□□□□□ -0.79
CDC42SE2-208ENST00000505065 RIOK1Q9BRS2 568 aaKnown RBP10.13□□□□□ -0.79
CDC42SE2-208ENST00000505065 MROH7-TTC4A0A0A0MT08 1334 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms