RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 ERO1AQ96HE7 468 aa8.86□□□□□ -0.99
NPIPB3-203ENST00000504841 WNK4Q96J92 1243 aa8.86□□□□□ -0.99
NPIPB3-203ENST00000504841 IFT57Q9NWB7 429 aa8.86□□□□□ -0.99
NPIPB3-203ENST00000504841 JAG2Q9Y219 1238 aa8.86□□□□□ -0.99
NPIPB3-203ENST00000504841 LEMD3Q9Y2U8 911 aa8.86□□□□□ -0.99
NPIPB3-203ENST00000504841 PCDHAC2Q9Y5I4 1007 aa8.86□□□□□ -0.99
NPIPB3-203ENST00000504841 MYH3P11055 1940 aa8.86□□□□□ -0.99
NPIPB3-203ENST00000504841 SNAP23O00161 211 aa8.85□□□□□ -0.99
NPIPB3-203ENST00000504841 MYCP01106 439 aaPredicted RBP8.85□□□□□ -0.99
NPIPB3-203ENST00000504841 EN2P19622 333 aaPredicted RBP8.85□□□□□ -0.99
NPIPB3-203ENST00000504841 ITGA6P23229 1130 aa8.85□□□□□ -0.99
NPIPB3-203ENST00000504841 GNAI1P63096 354 aa8.85□□□□□ -0.99
NPIPB3-203ENST00000504841 CRHR2Q13324 411 aa8.85□□□□□ -0.99
NPIPB3-203ENST00000504841 INTS3Q68E01 1043 aaKnown RBP8.85□□□□□ -0.99
NPIPB3-203ENST00000504841 KSR2Q6VAB6 950 aa8.85□□□□□ -0.99
NPIPB3-203ENST00000504841 SPDYE1Q8NFV5 336 aaPredicted RBP8.85□□□□□ -0.99
NPIPB3-203ENST00000504841 MPHOSPH8Q99549 860 aa8.85□□□□□ -0.99
NPIPB3-203ENST00000504841 ANKRD2Q9GZV1 360 aa8.85□□□□□ -0.99
NPIPB3-203ENST00000504841 PTPN22Q9Y2R2 807 aa8.85□□□□□ -0.99
NPIPB3-203ENST00000504841 NEURL1BA8MQ27 555 aa8.84□□□□□ -0.99
NPIPB3-203ENST00000504841 APAF1O14727 1248 aa8.84□□□□□ -0.99
NPIPB3-203ENST00000504841 MYO1BO43795 1136 aa8.84□□□□□ -0.99
NPIPB3-203ENST00000504841 ZNF853P0CG23 659 aa8.84□□□□□ -0.99
NPIPB3-203ENST00000504841 ZBTB48P10074 688 aaPredicted RBP8.84□□□□□ -0.99
NPIPB3-203ENST00000504841 RBM5P52756 815 aaKnown RBP eCLIP8.84□□□□□ -0.99
NPIPB3-203ENST00000504841 INHBEP58166 350 aa8.84□□□□□ -0.99
NPIPB3-203ENST00000504841 CALD1Q05682 793 aaKnown RBP8.84□□□□□ -0.99
NPIPB3-203ENST00000504841 CFAP100Q494V2 611 aa8.84□□□□□ -0.99
NPIPB3-203ENST00000504841 CERS5Q8N5B7 392 aa8.84□□□□□ -0.99
NPIPB3-203ENST00000504841 TSPYL6Q8N831 410 aa8.84□□□□□ -0.99
NPIPB3-203ENST00000504841 HELBQ8NG08 1087 aaPredicted RBP8.84□□□□□ -0.99
NPIPB3-203ENST00000504841 ZBED3Q96IU2 234 aaPredicted RBP8.84□□□□□ -0.99
NPIPB3-203ENST00000504841 STK31Q9BXU1 1019 aa8.84□□□□□ -0.99
NPIPB3-203ENST00000504841 EFCC1Q9HA90 598 aa8.84□□□□□ -0.99
NPIPB3-203ENST00000504841 CD209Q9NNX6 404 aa8.84□□□□□ -0.99
NPIPB3-203ENST00000504841 CHMP3Q9Y3E7 222 aa8.84□□□□□ -0.99
NPIPB3-203ENST00000504841 AOX1Q06278 1338 aa8.83□□□□□ -1
NPIPB3-203ENST00000504841 TAF5LO75529 589 aa8.83□□□□□ -1
NPIPB3-203ENST00000504841 GJA5P36382 358 aa8.83□□□□□ -1
NPIPB3-203ENST00000504841 IREB2P48200 963 aaKnown RBP8.83□□□□□ -1
NPIPB3-203ENST00000504841 FXR1P51114 621 aaKnown RBP eCLIP8.83□□□□□ -1
NPIPB3-203ENST00000504841 SP3Q02447 781 aa8.83□□□□□ -1
NPIPB3-203ENST00000504841 CHRNDQ07001 517 aa8.83□□□□□ -1
NPIPB3-203ENST00000504841 DDX10Q13206 875 aaKnown RBP8.83□□□□□ -1
NPIPB3-203ENST00000504841 MAP3K11Q16584 847 aa8.83□□□□□ -1
NPIPB3-203ENST00000504841 SUPT20HL1Q3ZLR7 823 aa8.83□□□□□ -1
NPIPB3-203ENST00000504841 NBPF12Q5TAG4 269 aaPredicted RBP8.83□□□□□ -1
NPIPB3-203ENST00000504841 OTUD7BQ6GQQ9 843 aa8.83□□□□□ -1
NPIPB3-203ENST00000504841 TMEM106CQ9BVX2 250 aa8.83□□□□□ -1
NPIPB3-203ENST00000504841 ELP3Q9H9T3 547 aa8.83□□□□□ -1
NPIPB3-203ENST00000504841 PPP2R3BQ9Y5P8 575 aa8.83□□□□□ -1
NPIPB3-203ENST00000504841 RBBP6Q7Z6E9 1792 aaKnown RBP8.82□□□□□ -1
NPIPB3-203ENST00000504841 H7C1W4 665 aa8.82□□□□□ -1
NPIPB3-203ENST00000504841 PITPNM1O00562 1244 aa8.82□□□□□ -1
NPIPB3-203ENST00000504841 ECM2O94769 699 aaPredicted RBP8.82□□□□□ -1
NPIPB3-203ENST00000504841 MMP14P50281 582 aa8.82□□□□□ -1
NPIPB3-203ENST00000504841 CAP1Q01518 475 aa8.82□□□□□ -1
NPIPB3-203ENST00000504841 RASA3Q14644 834 aa8.82□□□□□ -1
NPIPB3-203ENST00000504841 TAF1CQ15572 869 aaPredicted RBP8.82□□□□□ -1
NPIPB3-203ENST00000504841 SLC4A8Q2Y0W8 1093 aa8.82□□□□□ -1
NPIPB3-203ENST00000504841 G2E3Q7L622 706 aa8.82□□□□□ -1
NPIPB3-203ENST00000504841 ANKRD13AQ8IZ07 590 aa8.82□□□□□ -1
NPIPB3-203ENST00000504841 TSR2Q969E8 191 aaKnown RBP8.82□□□□□ -1
NPIPB3-203ENST00000504841 ARMC5Q96C12 935 aa8.82□□□□□ -1
NPIPB3-203ENST00000504841 OPTNQ96CV9 577 aa8.82□□□□□ -1
NPIPB3-203ENST00000504841 PRMT6Q96LA8 375 aaPredicted RBP8.82□□□□□ -1
NPIPB3-203ENST00000504841 ECM29Q5VYK3 1845 aa8.82□□□□□ -1
NPIPB3-203ENST00000504841 KIAA0100Q14667 2235 aaKnown RBP8.81□□□□□ -1
NPIPB3-203ENST00000504841 OTOFQ9HC10 1997 aa8.81□□□□□ -1
NPIPB3-203ENST00000504841 ANKRD18BA2A2Z9 1011 aa8.81□□□□□ -1
NPIPB3-203ENST00000504841 PLIN1O60240 522 aa8.81□□□□□ -1
NPIPB3-203ENST00000504841 USP2O75604 605 aaPredicted RBP8.81□□□□□ -1
NPIPB3-203ENST00000504841 GCKRQ14397 625 aa8.81□□□□□ -1
NPIPB3-203ENST00000504841 SLC9C1Q4G0N8 1177 aa8.81□□□□□ -1
NPIPB3-203ENST00000504841 CHRDL2Q6WN34 429 aa8.81□□□□□ -1
NPIPB3-203ENST00000504841 ZNF804AQ7Z570 1209 aa8.81□□□□□ -1
NPIPB3-203ENST00000504841 PTPN18Q99952 460 aa8.81□□□□□ -1
NPIPB3-203ENST00000504841 COLQQ9Y215 455 aaPredicted RBP8.81□□□□□ -1
NPIPB3-203ENST00000504841 PTCH2Q9Y6C5 1203 aa8.81□□□□□ -1
NPIPB3-203ENST00000504841 CCL15-CCL14A0A0B4J2E2 113 aa8.8□□□□□ -1
NPIPB3-203ENST00000504841 CCL15Q16663 113 aa8.8□□□□□ -1
NPIPB3-203ENST00000504841 CDAN1Q8IWY9 1227 aa8.8□□□□□ -1
NPIPB3-203ENST00000504841 MTMR14Q8NCE2 650 aa8.8□□□□□ -1
NPIPB3-203ENST00000504841 BRI3BPQ8WY22 251 aa8.8□□□□□ -1
NPIPB3-203ENST00000504841 OTUD5Q96G74 571 aa8.8□□□□□ -1
NPIPB3-203ENST00000504841 ZNF333Q96JL9 665 aa8.8□□□□□ -1
NPIPB3-203ENST00000504841 PLA2G12BQ9BX93 195 aa8.8□□□□□ -1
NPIPB3-203ENST00000504841 CHMP4AQ9BY43 222 aa8.8□□□□□ -1
NPIPB3-203ENST00000504841 TDRD3Q9H7E2 651 aaKnown RBP8.8□□□□□ -1
NPIPB3-203ENST00000504841 IRS2Q9Y4H2 1338 aa8.8□□□□□ -1
NPIPB3-203ENST00000504841 A0A1B0GUL6 1792 aa8.79□□□□□ -1
NPIPB3-203ENST00000504841 LAMB1P07942 1786 aa8.79□□□□□ -1
NPIPB3-203ENST00000504841 TCP10L2B9ZVM9 353 aa8.79□□□□□ -1
NPIPB3-203ENST00000504841 FLIIQ13045 1269 aa8.79□□□□□ -1
NPIPB3-203ENST00000504841 IFIT5Q13325 482 aaKnown RBP8.79□□□□□ -1
NPIPB3-203ENST00000504841 FKBP5Q13451 457 aaPredicted RBP8.79□□□□□ -1
NPIPB3-203ENST00000504841 TNFAIP1Q13829 316 aa8.79□□□□□ -1
NPIPB3-203ENST00000504841 TWISTNBQ3B726 338 aaPredicted RBP8.79□□□□□ -1
NPIPB3-203ENST00000504841 TAF7LQ5H9L4 462 aa8.79□□□□□ -1
NPIPB3-203ENST00000504841 SH3TC2Q8TF17 1288 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms