RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 EYA2O00167 538 aa17.78■□□□□ 0.44
HOXC9-202ENST00000504557 PDE8BO95263 885 aa17.78■□□□□ 0.44
HOXC9-202ENST00000504557 GNAI3P08754 354 aa17.78■□□□□ 0.44
HOXC9-202ENST00000504557 FTSJ3Q8IY81 847 aaKnown RBP17.78■□□□□ 0.44
HOXC9-202ENST00000504557 TMEM57Q8N5G2 664 aa17.78■□□□□ 0.44
HOXC9-202ENST00000504557 FAM84BQ96KN1 310 aaPredicted RBP17.78■□□□□ 0.44
HOXC9-202ENST00000504557 ARAP2Q8WZ64 1704 aa17.78■□□□□ 0.44
HOXC9-202ENST00000504557 WDR33Q9C0J8 1336 aaKnown RBP17.77■□□□□ 0.44
HOXC9-202ENST00000504557 RASSF10A6NK89 507 aa17.77■□□□□ 0.44
HOXC9-202ENST00000504557 CAVIN4Q5BKX8 364 aa17.77■□□□□ 0.44
HOXC9-202ENST00000504557 TLL2Q9Y6L7 1015 aa17.77■□□□□ 0.44
HOXC9-202ENST00000504557 PCNTO95613 3336 aa17.76■□□□□ 0.43
HOXC9-202ENST00000504557 WNT10BO00744 389 aa17.76■□□□□ 0.43
HOXC9-202ENST00000504557 IFIT1P09914 478 aaKnown RBP17.76■□□□□ 0.43
HOXC9-202ENST00000504557 BCAMP50895 628 aa17.76■□□□□ 0.43
HOXC9-202ENST00000504557 RBM5P52756 815 aaKnown RBP eCLIP17.76■□□□□ 0.43
HOXC9-202ENST00000504557 PUM3Q15397 648 aaKnown RBP17.76■□□□□ 0.43
HOXC9-202ENST00000504557 PRAMEF18Q5VWM3 479 aa17.76■□□□□ 0.43
HOXC9-202ENST00000504557 VGLL2Q8N8G2 317 aa17.76■□□□□ 0.43
HOXC9-202ENST00000504557 CDCA5Q96FF9 252 aa17.76■□□□□ 0.43
HOXC9-202ENST00000504557 CAPNS2Q96L46 248 aa17.76■□□□□ 0.43
HOXC9-202ENST00000504557 PCDHAC2Q9Y5I4 1007 aa17.76■□□□□ 0.43
HOXC9-202ENST00000504557 SRGAP3O43295 1099 aa17.75■□□□□ 0.43
HOXC9-202ENST00000504557 SLC5A1P13866 664 aa17.75■□□□□ 0.43
HOXC9-202ENST00000504557 MFSD14BQ5SR56 506 aa17.75■□□□□ 0.43
HOXC9-202ENST00000504557 ATG9AQ7Z3C6 839 aa17.75■□□□□ 0.43
HOXC9-202ENST00000504557 SAPCD2Q86UD0 394 aa17.75■□□□□ 0.43
HOXC9-202ENST00000504557 ITPRIPQ8IWB1 547 aa17.75■□□□□ 0.43
HOXC9-202ENST00000504557 TDRD7Q8NHU6 1098 aaKnown RBP17.75■□□□□ 0.43
HOXC9-202ENST00000504557 HUNKP57058 714 aa17.74■□□□□ 0.43
HOXC9-202ENST00000504557 DLGAP5Q15398 846 aa17.74■□□□□ 0.43
HOXC9-202ENST00000504557 C2orf69Q8N8R5 385 aa17.74■□□□□ 0.43
HOXC9-202ENST00000504557 C1orf115Q9H7X2 142 aa17.74■□□□□ 0.43
HOXC9-202ENST00000504557 GBA2Q9HCG7 927 aaPredicted RBP17.74■□□□□ 0.43
HOXC9-202ENST00000504557 CEP126Q9P2H0 1117 aa17.74■□□□□ 0.43
HOXC9-202ENST00000504557 AOC2O75106 756 aa17.73■□□□□ 0.43
HOXC9-202ENST00000504557 GNAI2P04899 355 aa17.73■□□□□ 0.43
HOXC9-202ENST00000504557 ECE1P42892 770 aa17.73■□□□□ 0.43
HOXC9-202ENST00000504557 ATP2B3Q16720 1220 aa17.73■□□□□ 0.43
HOXC9-202ENST00000504557 CFAP100Q494V2 611 aa17.73■□□□□ 0.43
HOXC9-202ENST00000504557 DZIP1LQ8IYY4 767 aaKnown RBP17.73■□□□□ 0.43
HOXC9-202ENST00000504557 CLRN2A0PK11 232 aa17.72■□□□□ 0.43
HOXC9-202ENST00000504557 RLBP1P12271 317 aa17.72■□□□□ 0.43
HOXC9-202ENST00000504557 FBXO33Q7Z6M2 555 aa17.72■□□□□ 0.43
HOXC9-202ENST00000504557 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.72■□□□□ 0.43
HOXC9-202ENST00000504557 TTF2Q9UNY4 1162 aaKnown RBP17.72■□□□□ 0.43
HOXC9-202ENST00000504557 FAM205AQ6ZU69 1335 aa17.72■□□□□ 0.43
HOXC9-202ENST00000504557 CIAO1O76071 339 aa17.71■□□□□ 0.43
HOXC9-202ENST00000504557 FGFR2P21802 821 aa17.71■□□□□ 0.43
HOXC9-202ENST00000504557 IL15P40933 162 aaPredicted RBP17.71■□□□□ 0.43
HOXC9-202ENST00000504557 TTLL12Q14166 644 aaPredicted RBP17.71■□□□□ 0.43
HOXC9-202ENST00000504557 LPIN2Q92539 896 aa17.71■□□□□ 0.43
HOXC9-202ENST00000504557 AIDAQ96BJ3 306 aa17.71■□□□□ 0.43
HOXC9-202ENST00000504557 VEZTQ9HBM0 779 aa17.71■□□□□ 0.43
HOXC9-202ENST00000504557 PITPNM2Q9BZ72 1349 aa17.71■□□□□ 0.42
HOXC9-202ENST00000504557 PNMA6EA0A0J9YXQ4 647 aa17.7■□□□□ 0.42
HOXC9-202ENST00000504557 FKBP1AP62942 108 aaKnown RBP17.7■□□□□ 0.42
HOXC9-202ENST00000504557 PRKG1Q13976 671 aa17.7■□□□□ 0.42
HOXC9-202ENST00000504557 GRIK5Q16478 980 aa17.7■□□□□ 0.42
HOXC9-202ENST00000504557 MOB2Q70IA6 237 aa17.7■□□□□ 0.42
HOXC9-202ENST00000504557 PANK1Q8TE04 598 aa17.7■□□□□ 0.42
HOXC9-202ENST00000504557 COPRSQ9NQ92 184 aa17.7■□□□□ 0.42
HOXC9-202ENST00000504557 FOXN1O15353 648 aa17.69■□□□□ 0.42
HOXC9-202ENST00000504557 MYO1BO43795 1136 aa17.69■□□□□ 0.42
HOXC9-202ENST00000504557 APOBEC3FQ8IUX4 373 aaKnown RBP17.69■□□□□ 0.42
HOXC9-202ENST00000504557 PRMT6Q96LA8 375 aaPredicted RBP17.69■□□□□ 0.42
HOXC9-202ENST00000504557 AOX1Q06278 1338 aa17.69■□□□□ 0.42
HOXC9-202ENST00000504557 PAPPA2Q9BXP8 1791 aa17.68■□□□□ 0.42
HOXC9-202ENST00000504557 ADORA1P30542 326 aa17.68■□□□□ 0.42
HOXC9-202ENST00000504557 ZNF157P51786 506 aaPredicted RBP17.68■□□□□ 0.42
HOXC9-202ENST00000504557 TFCP2Q12800 502 aa17.68■□□□□ 0.42
HOXC9-202ENST00000504557 FBXO3Q9UK99 471 aa17.68■□□□□ 0.42
HOXC9-202ENST00000504557 AK9Q5TCS8 1911 aa17.68■□□□□ 0.42
HOXC9-202ENST00000504557 THSD7BQ9C0I4 1608 aa17.68■□□□□ 0.42
HOXC9-202ENST00000504557 SPDYE2BA6NHP3 402 aa17.67■□□□□ 0.42
HOXC9-202ENST00000504557 SPDYE6P0CI01 402 aa17.67■□□□□ 0.42
HOXC9-202ENST00000504557 NF2P35240 595 aa17.67■□□□□ 0.42
HOXC9-202ENST00000504557 MMP14P50281 582 aa17.67■□□□□ 0.42
HOXC9-202ENST00000504557 TIMM10P62072 90 aa17.67■□□□□ 0.42
HOXC9-202ENST00000504557 COL13A1Q5TAT6 717 aaPredicted RBP17.67■□□□□ 0.42
HOXC9-202ENST00000504557 RGMBQ6NW40 437 aa17.67■□□□□ 0.42
HOXC9-202ENST00000504557 ZBED3Q96IU2 234 aaPredicted RBP17.67■□□□□ 0.42
HOXC9-202ENST00000504557 UBE2Q2LH0YL09 131 aa17.66■□□□□ 0.42
HOXC9-202ENST00000504557 PHKA1P46020 1223 aa17.66■□□□□ 0.42
HOXC9-202ENST00000504557 CRKP46108 304 aa17.66■□□□□ 0.42
HOXC9-202ENST00000504557 MAP2K1Q02750 393 aaPredicted RBP17.66■□□□□ 0.42
HOXC9-202ENST00000504557 G3BP1Q13283 466 aaKnown RBP eCLIP17.66■□□□□ 0.42
HOXC9-202ENST00000504557 OS9Q13438 667 aaPredicted RBP17.66■□□□□ 0.42
HOXC9-202ENST00000504557 MTX1Q13505 466 aa17.66■□□□□ 0.42
HOXC9-202ENST00000504557 TBC1D22AQ8WUA7 517 aa17.66■□□□□ 0.42
HOXC9-202ENST00000504557 NEUROD6Q96NK8 337 aa17.66■□□□□ 0.42
HOXC9-202ENST00000504557 BEGAINQ9BUH8 593 aa17.66■□□□□ 0.42
HOXC9-202ENST00000504557 TDRD3Q9H7E2 651 aaKnown RBP17.66■□□□□ 0.42
HOXC9-202ENST00000504557 FZD1Q9UP38 647 aa17.66■□□□□ 0.42
HOXC9-202ENST00000504557 AKAP11Q9UKA4 1901 aa17.66■□□□□ 0.42
HOXC9-202ENST00000504557 MYH2Q9UKX2 1941 aa17.65■□□□□ 0.42
HOXC9-202ENST00000504557 COL1A1P02452 1464 aaPredicted RBP17.65■□□□□ 0.42
HOXC9-202ENST00000504557 MTMR14Q8NCE2 650 aa17.65■□□□□ 0.42
HOXC9-202ENST00000504557 HHIPL1Q96JK4 782 aa17.65■□□□□ 0.42
HOXC9-202ENST00000504557 YTHDC1Q96MU7 727 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms