RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 ATG9AQ7Z3C6 839 aa9.62□□□□□ -0.87
SKP2-203ENST00000504386 FBXO33Q7Z6M2 555 aa9.62□□□□□ -0.87
SKP2-203ENST00000504386 TXNRD3Q86VQ6 643 aa9.62□□□□□ -0.87
SKP2-203ENST00000504386 SULF1Q8IWU6 871 aa9.62□□□□□ -0.87
SKP2-203ENST00000504386 CNTROBQ8N137 903 aa9.62□□□□□ -0.87
SKP2-203ENST00000504386 KLHDC4Q8TBB5 520 aa9.62□□□□□ -0.87
SKP2-203ENST00000504386 WDR66Q8TBY9 1149 aa9.62□□□□□ -0.87
SKP2-203ENST00000504386 FAM84BQ96KN1 310 aaPredicted RBP9.62□□□□□ -0.87
SKP2-203ENST00000504386 GPR108Q9NPR9 543 aa9.62□□□□□ -0.87
SKP2-203ENST00000504386 PGAP2Q9UHJ9 254 aa9.62□□□□□ -0.87
SKP2-203ENST00000504386 ZBTB12Q9Y330 459 aaPredicted RBP9.62□□□□□ -0.87
SKP2-203ENST00000504386 PITPNM2Q9BZ72 1349 aa9.61□□□□□ -0.87
SKP2-203ENST00000504386 IRS2Q9Y4H2 1338 aa9.61□□□□□ -0.87
SKP2-203ENST00000504386 SURF6O75683 361 aaKnown RBP9.61□□□□□ -0.87
SKP2-203ENST00000504386 UQCRFS1P1P0C7P4 283 aa9.61□□□□□ -0.87
SKP2-203ENST00000504386 GYG1P46976 350 aa9.61□□□□□ -0.87
SKP2-203ENST00000504386 MFSD14BQ5SR56 506 aa9.61□□□□□ -0.87
SKP2-203ENST00000504386 SLF2Q8IX21 1173 aa9.61□□□□□ -0.87
SKP2-203ENST00000504386 GMLQ99445 158 aa9.61□□□□□ -0.87
SKP2-203ENST00000504386 MYOZ2Q9NPC6 264 aa9.61□□□□□ -0.87
SKP2-203ENST00000504386 CREBZFQ9NS37 354 aa9.61□□□□□ -0.87
SKP2-203ENST00000504386 DENND2AQ9ULE3 1009 aa9.61□□□□□ -0.87
SKP2-203ENST00000504386 COG6Q9Y2V7 657 aa9.61□□□□□ -0.87
SKP2-203ENST00000504386 NOP58Q9Y2X3 529 aaKnown RBP9.61□□□□□ -0.87
SKP2-203ENST00000504386 PDS5AQ29RF7 1337 aaKnown RBP9.6□□□□□ -0.87
SKP2-203ENST00000504386 PNMA6EA0A0J9YXQ4 647 aa9.6□□□□□ -0.87
SKP2-203ENST00000504386 TMEM88BA6NKF7 163 aa9.6□□□□□ -0.87
SKP2-203ENST00000504386 ABCB7O75027 752 aa9.6□□□□□ -0.87
SKP2-203ENST00000504386 KLRK1P26718 216 aa9.6□□□□□ -0.87
SKP2-203ENST00000504386 NF2P35240 595 aa9.6□□□□□ -0.87
SKP2-203ENST00000504386 HDLBPQ00341 1268 aaKnown RBP9.6□□□□□ -0.87
SKP2-203ENST00000504386 TNFAIP1Q13829 316 aa9.6□□□□□ -0.87
SKP2-203ENST00000504386 DLGAP5Q15398 846 aa9.6□□□□□ -0.87
SKP2-203ENST00000504386 TBC1D10BQ4KMP7 808 aaPredicted RBP9.6□□□□□ -0.87
SKP2-203ENST00000504386 SPTY2D1Q68D10 685 aaPredicted RBP9.6□□□□□ -0.87
SKP2-203ENST00000504386 CEP85Q6P2H3 762 aa9.6□□□□□ -0.87
SKP2-203ENST00000504386 KRT26Q7Z3Y9 468 aa9.6□□□□□ -0.87
SKP2-203ENST00000504386 APOBEC3FQ8IUX4 373 aaKnown RBP9.6□□□□□ -0.87
SKP2-203ENST00000504386 MRIQ9BWK5 157 aa9.6□□□□□ -0.87
SKP2-203ENST00000504386 KCNQ5Q9NR82 932 aa9.6□□□□□ -0.87
SKP2-203ENST00000504386 ZBTB40Q9NUA8 1239 aa9.6□□□□□ -0.87
SKP2-203ENST00000504386 PA2G4Q9UQ80 394 aaKnown RBP9.6□□□□□ -0.87
SKP2-203ENST00000504386 TNNQ9UQP3 1299 aa9.6□□□□□ -0.87
SKP2-203ENST00000504386 PASKQ96RG2 1323 aa9.59□□□□□ -0.87
SKP2-203ENST00000504386 A0A1B0GUL7 405 aa9.59□□□□□ -0.87
SKP2-203ENST00000504386 RAB11FIP3O75154 756 aa9.59□□□□□ -0.87
SKP2-203ENST00000504386 RRP1P56182 461 aaKnown RBP9.59□□□□□ -0.87
SKP2-203ENST00000504386 TFCP2Q12800 502 aa9.59□□□□□ -0.87
SKP2-203ENST00000504386 CCDC158Q5M9N0 1113 aa9.59□□□□□ -0.87
SKP2-203ENST00000504386 RBM26Q5T8P6 1007 aaKnown RBP9.59□□□□□ -0.87
SKP2-203ENST00000504386 MAP1SQ66K74 1059 aaPredicted RBP9.59□□□□□ -0.87
SKP2-203ENST00000504386 SAMD7Q7Z3H4 446 aa9.59□□□□□ -0.87
SKP2-203ENST00000504386 KIAA0825Q8IV33 1275 aa9.59□□□□□ -0.87
SKP2-203ENST00000504386 MTMR14Q8NCE2 650 aa9.59□□□□□ -0.87
SKP2-203ENST00000504386 NEUROD6Q96NK8 337 aa9.59□□□□□ -0.87
SKP2-203ENST00000504386 TMOD2Q9NZR1 351 aa9.59□□□□□ -0.87
SKP2-203ENST00000504386 SERPINA10Q9UK55 444 aa9.59□□□□□ -0.87
SKP2-203ENST00000504386 PPP2R3BQ9Y5P8 575 aa9.59□□□□□ -0.87
SKP2-203ENST00000504386 PSME4Q14997 1843 aa9.59□□□□□ -0.88
SKP2-203ENST00000504386 SALL1Q9NSC2 1324 aa9.58□□□□□ -0.88
SKP2-203ENST00000504386 SNAP23O00161 211 aa9.58□□□□□ -0.88
SKP2-203ENST00000504386 ITGBL1O95965 494 aaPredicted RBP9.58□□□□□ -0.88
SKP2-203ENST00000504386 BCAMP50895 628 aa9.58□□□□□ -0.88
SKP2-203ENST00000504386 CHAF1AQ13111 956 aaPredicted RBP9.58□□□□□ -0.88
SKP2-203ENST00000504386 SCARF1Q14162 830 aa9.58□□□□□ -0.88
SKP2-203ENST00000504386 TMED8Q6PL24 325 aaPredicted RBP9.58□□□□□ -0.88
SKP2-203ENST00000504386 CLASRPQ8N2M8 674 aaKnown RBP9.58□□□□□ -0.88
SKP2-203ENST00000504386 TRPM4Q8TD43 1214 aa9.58□□□□□ -0.88
SKP2-203ENST00000504386 KIF1BPQ96EK5 621 aa9.58□□□□□ -0.88
SKP2-203ENST00000504386 C1orf115Q9H7X2 142 aa9.58□□□□□ -0.88
SKP2-203ENST00000504386 GGA3Q9NZ52 723 aa9.58□□□□□ -0.88
SKP2-203ENST00000504386 COL1A1P02452 1464 aaPredicted RBP9.58□□□□□ -0.88
SKP2-203ENST00000504386 ADAMTSL1Q8N6G6 1762 aa9.58□□□□□ -0.88
SKP2-203ENST00000504386 WTIPA6NIX2 430 aaPredicted RBP9.57□□□□□ -0.88
SKP2-203ENST00000504386 POTEIP0CG38 1075 aa9.57□□□□□ -0.88
SKP2-203ENST00000504386 POTEJP0CG39 1038 aa9.57□□□□□ -0.88
SKP2-203ENST00000504386 RBM5P52756 815 aaKnown RBP eCLIP9.57□□□□□ -0.88
SKP2-203ENST00000504386 FKBP1BP68106 108 aa9.57□□□□□ -0.88
SKP2-203ENST00000504386 CCDC102BQ68D86 513 aa9.57□□□□□ -0.88
SKP2-203ENST00000504386 TEKT1Q969V4 418 aa9.57□□□□□ -0.88
SKP2-203ENST00000504386 HOOK2Q96ED9 719 aa9.57□□□□□ -0.88
SKP2-203ENST00000504386 XAGE2Q96GT9 111 aa9.57□□□□□ -0.88
SKP2-203ENST00000504386 ZBTB47Q9UFB7 747 aaPredicted RBP9.57□□□□□ -0.88
SKP2-203ENST00000504386 TTF2Q9UNY4 1162 aaKnown RBP9.57□□□□□ -0.88
SKP2-203ENST00000504386 A0A1B0GUL6 1792 aa9.57□□□□□ -0.88
SKP2-203ENST00000504386 GOLGB1Q14789 3259 aaKnown RBP9.57□□□□□ -0.88
SKP2-203ENST00000504386 SCN9AQ15858 1988 aa9.56□□□□□ -0.88
SKP2-203ENST00000504386 WNT10BO00744 389 aa9.56□□□□□ -0.88
SKP2-203ENST00000504386 LDHBP07195 334 aaKnown RBP9.56□□□□□ -0.88
SKP2-203ENST00000504386 ECE1P42892 770 aa9.56□□□□□ -0.88
SKP2-203ENST00000504386 TNNI2P48788 182 aa9.56□□□□□ -0.88
SKP2-203ENST00000504386 HIRAP54198 1017 aaPredicted RBP9.56□□□□□ -0.88
SKP2-203ENST00000504386 GSTO1P78417 241 aa9.56□□□□□ -0.88
SKP2-203ENST00000504386 CFAP100Q494V2 611 aa9.56□□□□□ -0.88
SKP2-203ENST00000504386 TNNI3KQ59H18 835 aa9.56□□□□□ -0.88
SKP2-203ENST00000504386 TTC39AQ5SRH9 613 aa9.56□□□□□ -0.88
SKP2-203ENST00000504386 ANGEL2Q5VTE6 544 aaKnown RBP9.56□□□□□ -0.88
SKP2-203ENST00000504386 HHIPL2Q6UWX4 724 aa9.56□□□□□ -0.88
SKP2-203ENST00000504386 C2orf69Q8N8R5 385 aa9.56□□□□□ -0.88
SKP2-203ENST00000504386 HHIPL1Q96JK4 782 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms