RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 ERICH6BQ5W0A0 696 aa16.27■□□□□ 0.2
PDLIM7-212ENST00000504380 TSHZ3Q63HK5 1081 aa16.27■□□□□ 0.2
PDLIM7-212ENST00000504380 CIAPIN1Q6FI81 312 aa16.27■□□□□ 0.2
PDLIM7-212ENST00000504380 PI16Q6UXB8 463 aa16.27■□□□□ 0.2
PDLIM7-212ENST00000504380 SNRKQ9NRH2 765 aa16.27■□□□□ 0.2
PDLIM7-212ENST00000504380 ZBTB47Q9UFB7 747 aaPredicted RBP16.27■□□□□ 0.2
PDLIM7-212ENST00000504380 ZBTB12Q9Y330 459 aaPredicted RBP16.27■□□□□ 0.2
PDLIM7-212ENST00000504380 COL1A1P02452 1464 aaPredicted RBP16.27■□□□□ 0.19
PDLIM7-212ENST00000504380 USP17L3A6NCW0 530 aa16.26■□□□□ 0.19
PDLIM7-212ENST00000504380 USP17L4A6NCW7 530 aa16.26■□□□□ 0.19
PDLIM7-212ENST00000504380 CCDC158Q5M9N0 1113 aa16.26■□□□□ 0.19
PDLIM7-212ENST00000504380 COL13A1Q5TAT6 717 aaPredicted RBP16.26■□□□□ 0.19
PDLIM7-212ENST00000504380 TTLL5Q6EMB2 1281 aa16.26■□□□□ 0.19
PDLIM7-212ENST00000504380 USP17L1Q7RTZ2 530 aa16.26■□□□□ 0.19
PDLIM7-212ENST00000504380 CHD1LQ86WJ1 897 aa16.26■□□□□ 0.19
PDLIM7-212ENST00000504380 SKAP1Q86WV1 359 aa16.26■□□□□ 0.19
PDLIM7-212ENST00000504380 NDUFB9Q9Y6M9 179 aa16.26■□□□□ 0.19
PDLIM7-212ENST00000504380 RASGRF1Q13972 1273 aa16.25■□□□□ 0.19
PDLIM7-212ENST00000504380 JMYQ8N9B5 988 aa16.25■□□□□ 0.19
PDLIM7-212ENST00000504380 GNL3LQ9NVN8 582 aaKnown RBP16.25■□□□□ 0.19
PDLIM7-212ENST00000504380 HMG20BQ9P0W2 317 aa16.25■□□□□ 0.19
PDLIM7-212ENST00000504380 ZNF646O15015 1829 aaPredicted RBP16.24■□□□□ 0.19
PDLIM7-212ENST00000504380 SHTN1A0MZ66 631 aa16.24■□□□□ 0.19
PDLIM7-212ENST00000504380 VIL1P09327 827 aaKnown RBP16.24■□□□□ 0.19
PDLIM7-212ENST00000504380 UQCRFS1P1P0C7P4 283 aa16.24■□□□□ 0.19
PDLIM7-212ENST00000504380 ARID4AP29374 1257 aaPredicted RBP16.24■□□□□ 0.19
PDLIM7-212ENST00000504380 MCAMP43121 646 aa16.24■□□□□ 0.19
PDLIM7-212ENST00000504380 TNIP1Q15025 636 aa16.24■□□□□ 0.19
PDLIM7-212ENST00000504380 GRIK5Q16478 980 aa16.24■□□□□ 0.19
PDLIM7-212ENST00000504380 DACT2Q5SW24 774 aa16.24■□□□□ 0.19
PDLIM7-212ENST00000504380 CENPQQ7L2Z9 268 aaPredicted RBP16.24■□□□□ 0.19
PDLIM7-212ENST00000504380 CERS5Q8N5B7 392 aa16.24■□□□□ 0.19
PDLIM7-212ENST00000504380 MYH13Q9UKX3 1938 aa16.23■□□□□ 0.19
PDLIM7-212ENST00000504380 FAM205AQ6ZU69 1335 aa16.23■□□□□ 0.19
PDLIM7-212ENST00000504380 GLTPD2A6NH11 291 aa16.23■□□□□ 0.19
PDLIM7-212ENST00000504380 PDE4AP27815 886 aa16.23■□□□□ 0.19
PDLIM7-212ENST00000504380 ZAP70P43403 619 aa16.23■□□□□ 0.19
PDLIM7-212ENST00000504380 GMPSP49915 693 aaPredicted RBP16.23■□□□□ 0.19
PDLIM7-212ENST00000504380 STRIP1Q5VSL9 837 aa16.23■□□□□ 0.19
PDLIM7-212ENST00000504380 RSBN1LQ6PCB5 846 aaPredicted RBP16.23■□□□□ 0.19
PDLIM7-212ENST00000504380 TBC1D9Q6ZT07 1266 aa16.23■□□□□ 0.19
PDLIM7-212ENST00000504380 BOLA2Q9H3K6 86 aa16.23■□□□□ 0.19
PDLIM7-212ENST00000504380 DENND2AQ9ULE3 1009 aa16.23■□□□□ 0.19
PDLIM7-212ENST00000504380 PSME4Q14997 1843 aa16.22■□□□□ 0.19
PDLIM7-212ENST00000504380 F8W031 263 aaPredicted RBP16.22■□□□□ 0.19
PDLIM7-212ENST00000504380 DPY19L2Q6NUT2 758 aa16.22■□□□□ 0.19
PDLIM7-212ENST00000504380 GPC2Q8N158 579 aa16.22■□□□□ 0.19
PDLIM7-212ENST00000504380 SPATA5Q8NB90 893 aa16.22■□□□□ 0.19
PDLIM7-212ENST00000504380 EDC3Q96F86 508 aaKnown RBP16.22■□□□□ 0.19
PDLIM7-212ENST00000504380 SALL3Q9BXA9 1300 aa16.21■□□□□ 0.19
PDLIM7-212ENST00000504380 ZC3H4Q9UPT8 1303 aaKnown RBP16.21■□□□□ 0.19
PDLIM7-212ENST00000504380 AKAP11Q9UKA4 1901 aa16.21■□□□□ 0.19
PDLIM7-212ENST00000504380 SEMA3EO15041 775 aa16.21■□□□□ 0.19
PDLIM7-212ENST00000504380 MFSD14BQ5SR56 506 aa16.21■□□□□ 0.19
PDLIM7-212ENST00000504380 DNAJC2Q99543 621 aaKnown RBP16.21■□□□□ 0.19
PDLIM7-212ENST00000504380 ECHDC1Q9NTX5 307 aa16.21■□□□□ 0.19
PDLIM7-212ENST00000504380 MAP4K4O95819 1239 aaPredicted RBP16.2■□□□□ 0.18
PDLIM7-212ENST00000504380 ATP5JP18859 108 aa16.2■□□□□ 0.18
PDLIM7-212ENST00000504380 MX1P20591 662 aa16.2■□□□□ 0.18
PDLIM7-212ENST00000504380 KIAA0825Q8IV33 1275 aa16.2■□□□□ 0.18
PDLIM7-212ENST00000504380 PLEKHM2Q8IWE5 1019 aa16.2■□□□□ 0.18
PDLIM7-212ENST00000504380 KLRG1Q96E93 195 aa16.2■□□□□ 0.18
PDLIM7-212ENST00000504380 ZNF512BQ96KM6 892 aaPredicted RBP16.2■□□□□ 0.18
PDLIM7-212ENST00000504380 GMLQ99445 158 aa16.2■□□□□ 0.18
PDLIM7-212ENST00000504380 ANTXR1Q9H6X2 564 aa16.2■□□□□ 0.18
PDLIM7-212ENST00000504380 PIH1D3Q9NQM4 214 aaKnown RBP16.2■□□□□ 0.18
PDLIM7-212ENST00000504380 GTF3C3Q9Y5Q9 886 aa16.2■□□□□ 0.18
PDLIM7-212ENST00000504380 CYP2E1P05181 493 aaPredicted RBP16.19■□□□□ 0.18
PDLIM7-212ENST00000504380 EPS15P42566 896 aa16.19■□□□□ 0.18
PDLIM7-212ENST00000504380 SCNN1DP51172 638 aa16.19■□□□□ 0.18
PDLIM7-212ENST00000504380 PDE1AP54750 535 aa16.19■□□□□ 0.18
PDLIM7-212ENST00000504380 WDR66Q8TBY9 1149 aa16.19■□□□□ 0.18
PDLIM7-212ENST00000504380 RRAGCQ9HB90 399 aa16.19■□□□□ 0.18
PDLIM7-212ENST00000504380 ABCF2Q9UG63 623 aa16.19■□□□□ 0.18
PDLIM7-212ENST00000504380 POTECB2RU33 542 aa16.18■□□□□ 0.18
PDLIM7-212ENST00000504380 PRDX5P30044 214 aa16.18■□□□□ 0.18
PDLIM7-212ENST00000504380 RBM26Q5T8P6 1007 aaKnown RBP16.18■□□□□ 0.18
PDLIM7-212ENST00000504380 MICALL2Q8IY33 904 aa16.18■□□□□ 0.18
PDLIM7-212ENST00000504380 PI4K2BQ8TCG2 481 aa16.18■□□□□ 0.18
PDLIM7-212ENST00000504380 GPATCH3Q96I76 525 aa16.18■□□□□ 0.18
PDLIM7-212ENST00000504380 NMRK2Q9NPI5 230 aa16.18■□□□□ 0.18
PDLIM7-212ENST00000504380 CNOT7Q9UIV1 285 aaKnown RBP16.18■□□□□ 0.18
PDLIM7-212ENST00000504380 MYO5AQ9Y4I1 1855 aaKnown RBP16.17■□□□□ 0.18
PDLIM7-212ENST00000504380 GOLIM4O00461 696 aa16.17■□□□□ 0.18
PDLIM7-212ENST00000504380 FKBP1AP62942 108 aaKnown RBP16.17■□□□□ 0.18
PDLIM7-212ENST00000504380 AGBL3Q8NEM8 1001 aa16.17■□□□□ 0.18
PDLIM7-212ENST00000504380 RBM46Q8TBY0 533 aaKnown RBP16.17■□□□□ 0.18
PDLIM7-212ENST00000504380 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.17■□□□□ 0.18
PDLIM7-212ENST00000504380 TBC1D22AQ8WUA7 517 aa16.17■□□□□ 0.18
PDLIM7-212ENST00000504380 HAUS7Q99871 368 aa16.17■□□□□ 0.18
PDLIM7-212ENST00000504380 GPRC5DQ9NZD1 345 aa16.17■□□□□ 0.18
PDLIM7-212ENST00000504380 STAP2Q9UGK3 403 aa16.17■□□□□ 0.18
PDLIM7-212ENST00000504380 PCDHAC2Q9Y5I4 1007 aa16.17■□□□□ 0.18
PDLIM7-212ENST00000504380 TTC41PQ6P2S7 1318 aa16.17■□□□□ 0.18
PDLIM7-212ENST00000504380 EGFRP00533 1210 aa16.16■□□□□ 0.18
PDLIM7-212ENST00000504380 RPS12P25398 132 aaKnown RBP16.16■□□□□ 0.18
PDLIM7-212ENST00000504380 SAMD7Q7Z3H4 446 aa16.16■□□□□ 0.18
PDLIM7-212ENST00000504380 TNS4Q8IZW8 715 aa16.16■□□□□ 0.18
PDLIM7-212ENST00000504380 DPF2Q92785 391 aa16.16■□□□□ 0.18
PDLIM7-212ENST00000504380 L3MBTL3Q96JM7 780 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms