RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 REM2Q8IYK8 340 aaPredicted RBP15.04■□□□□ -0
MED28-203ENST00000503945 TRMT2AQ8IZ69 625 aaKnown RBP15.04■□□□□ -0
MED28-203ENST00000503945 SUCLG2Q96I99 432 aa15.04■□□□□ -0
MED28-203ENST00000503945 SASH1O94885 1247 aa15.03■□□□□ -0
MED28-203ENST00000503945 SOX10P56693 466 aa15.03■□□□□ -0
MED28-203ENST00000503945 UBE4AQ14139 1066 aa15.03■□□□□ -0
MED28-203ENST00000503945 KIAA0825Q8IV33 1275 aa15.03■□□□□ -0
MED28-203ENST00000503945 KAZALD1Q96I82 304 aa15.03■□□□□ -0
MED28-203ENST00000503945 SMC4Q9NTJ3 1288 aa15.03■□□□□ -0
MED28-203ENST00000503945 CACNA1FO60840 1977 aa15.03■□□□□ -0
MED28-203ENST00000503945 ZNF646O15015 1829 aaPredicted RBP15.03■□□□□ -0
MED28-203ENST00000503945 PAPPA2Q9BXP8 1791 aa15.03■□□□□ -0
MED28-203ENST00000503945 WNT10BO00744 389 aa15.02■□□□□ -0
MED28-203ENST00000503945 IL1R1P14778 569 aa15.02■□□□□ -0
MED28-203ENST00000503945 CTU1Q7Z7A3 348 aaKnown RBP15.02■□□□□ -0
MED28-203ENST00000503945 USP44Q9H0E7 712 aa15.02■□□□□ -0
MED28-203ENST00000503945 BICC1Q9H694 974 aaKnown RBP15.02■□□□□ -0
MED28-203ENST00000503945 RIPOR2Q9Y4F9 1068 aa15.02■□□□□ -0
MED28-203ENST00000503945 MROH5Q6ZUA9 1318 aa15.01□□□□□ -0.01
MED28-203ENST00000503945 TBC1D8O95759 1140 aa15.01□□□□□ -0.01
MED28-203ENST00000503945 HIBADHP31937 336 aaKnown RBP15.01□□□□□ -0.01
MED28-203ENST00000503945 DLGAP5Q15398 846 aa15.01□□□□□ -0.01
MED28-203ENST00000503945 PUS3Q9BZE2 481 aaKnown RBP15.01□□□□□ -0.01
MED28-203ENST00000503945 NOB1Q9ULX3 412 aaKnown RBP15.01□□□□□ -0.01
MED28-203ENST00000503945 NF2P35240 595 aa15□□□□□ -0.01
MED28-203ENST00000503945 FKBP1AP62942 108 aaKnown RBP15□□□□□ -0.01
MED28-203ENST00000503945 TTLL12Q14166 644 aaPredicted RBP15□□□□□ -0.01
MED28-203ENST00000503945 RABL6Q3YEC7 729 aaPredicted RBP15□□□□□ -0.01
MED28-203ENST00000503945 VPS37DQ86XT2 251 aa15□□□□□ -0.01
MED28-203ENST00000503945 HDAC5Q9UQL6 1122 aa15□□□□□ -0.01
MED28-203ENST00000503945 PDE4DIPQ5VU43 2346 aa14.99□□□□□ -0.01
MED28-203ENST00000503945 F8W031 263 aaPredicted RBP14.99□□□□□ -0.01
MED28-203ENST00000503945 MYO1BO43795 1136 aa14.99□□□□□ -0.01
MED28-203ENST00000503945 TM4SF4P48230 202 aa14.99□□□□□ -0.01
MED28-203ENST00000503945 IRS2Q9Y4H2 1338 aa14.98□□□□□ -0.01
MED28-203ENST00000503945 GYG1P46976 350 aa14.98□□□□□ -0.01
MED28-203ENST00000503945 RBM5P52756 815 aaKnown RBP eCLIP14.98□□□□□ -0.01
MED28-203ENST00000503945 PTPN12Q05209 780 aaKnown RBP14.98□□□□□ -0.01
MED28-203ENST00000503945 MKRN3Q13064 507 aaKnown RBP14.98□□□□□ -0.01
MED28-203ENST00000503945 PRKG1Q13976 671 aa14.98□□□□□ -0.01
MED28-203ENST00000503945 CAVIN4Q5BKX8 364 aa14.98□□□□□ -0.01
MED28-203ENST00000503945 METTL24Q5JXM2 366 aa14.98□□□□□ -0.01
MED28-203ENST00000503945 ANKRD44Q8N8A2 993 aa14.98□□□□□ -0.01
MED28-203ENST00000503945 TDRD7Q8NHU6 1098 aaKnown RBP14.98□□□□□ -0.01
MED28-203ENST00000503945 ZNF296Q8WUU4 475 aaPredicted RBP14.98□□□□□ -0.01
MED28-203ENST00000503945 FAM84BQ96KN1 310 aaPredicted RBP14.98□□□□□ -0.01
MED28-203ENST00000503945 API5Q9BZZ5 524 aaKnown RBP14.98□□□□□ -0.01
MED28-203ENST00000503945 HPS5Q9UPZ3 1129 aa14.98□□□□□ -0.01
MED28-203ENST00000503945 FRAT2O75474 233 aaPredicted RBP14.97□□□□□ -0.01
MED28-203ENST00000503945 PDE8BO95263 885 aa14.97□□□□□ -0.01
MED28-203ENST00000503945 LRRC24Q50LG9 513 aa14.97□□□□□ -0.01
MED28-203ENST00000503945 APOBEC3FQ8IUX4 373 aaKnown RBP14.97□□□□□ -0.01
MED28-203ENST00000503945 CERS5Q8N5B7 392 aa14.97□□□□□ -0.01
MED28-203ENST00000503945 MTMR14Q8NCE2 650 aa14.97□□□□□ -0.01
MED28-203ENST00000503945 ZBED3Q96IU2 234 aaPredicted RBP14.96□□□□□ -0.01
MED28-203ENST00000503945 R3HDMLQ9H3Y0 253 aa14.96□□□□□ -0.01
MED28-203ENST00000503945 JAG2Q9Y219 1238 aa14.96□□□□□ -0.01
MED28-203ENST00000503945 GPR25O00155 361 aa14.95□□□□□ -0.02
MED28-203ENST00000503945 IPO8O15397 1037 aaKnown RBP14.95□□□□□ -0.02
MED28-203ENST00000503945 UBTFL1P0CB47 393 aaPredicted RBP14.95□□□□□ -0.02
MED28-203ENST00000503945 PKN2Q16513 984 aaKnown RBP14.95□□□□□ -0.02
MED28-203ENST00000503945 CFAP100Q494V2 611 aa14.95□□□□□ -0.02
MED28-203ENST00000503945 MFSD14BQ5SR56 506 aa14.95□□□□□ -0.02
MED28-203ENST00000503945 ARMC9Q7Z3E5 817 aa14.95□□□□□ -0.02
MED28-203ENST00000503945 FBXO33Q7Z6M2 555 aa14.95□□□□□ -0.02
MED28-203ENST00000503945 KLHDC4Q8TBB5 520 aa14.95□□□□□ -0.02
MED28-203ENST00000503945 ARHGAP45Q92619 1136 aa14.95□□□□□ -0.02
MED28-203ENST00000503945 PRMT6Q96LA8 375 aaPredicted RBP14.95□□□□□ -0.02
MED28-203ENST00000503945 DEFB129Q9H1M3 183 aa14.95□□□□□ -0.02
MED28-203ENST00000503945 FZD1Q9UP38 647 aa14.95□□□□□ -0.02
MED28-203ENST00000503945 FAM205AQ6ZU69 1335 aa14.94□□□□□ -0.02
MED28-203ENST00000503945 IFIT1P09914 478 aaKnown RBP14.94□□□□□ -0.02
MED28-203ENST00000503945 RARSP54136 660 aaKnown RBP14.94□□□□□ -0.02
MED28-203ENST00000503945 LDLRAD1Q5T700 205 aa14.94□□□□□ -0.02
MED28-203ENST00000503945 ANGEL1Q9UNK9 670 aaKnown RBP14.94□□□□□ -0.02
MED28-203ENST00000503945 TTF2Q9UNY4 1162 aaKnown RBP14.94□□□□□ -0.02
MED28-203ENST00000503945 EYA2O00167 538 aa14.93□□□□□ -0.02
MED28-203ENST00000503945 SUPT20HL1Q3ZLR7 823 aa14.93□□□□□ -0.02
MED28-203ENST00000503945 SPRYD7Q5W111 196 aa14.93□□□□□ -0.02
MED28-203ENST00000503945 DIEXFQ68CQ4 756 aaKnown RBP14.93□□□□□ -0.02
MED28-203ENST00000503945 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.93□□□□□ -0.02
MED28-203ENST00000503945 PCDHAC2Q9Y5I4 1007 aa14.93□□□□□ -0.02
MED28-203ENST00000503945 SPDYE2BA6NHP3 402 aa14.92□□□□□ -0.02
MED28-203ENST00000503945 PPP1R12BO60237 982 aaPredicted RBP14.92□□□□□ -0.02
MED28-203ENST00000503945 SPDYE6P0CI01 402 aa14.92□□□□□ -0.02
MED28-203ENST00000503945 BCAMP50895 628 aa14.92□□□□□ -0.02
MED28-203ENST00000503945 PUM3Q15397 648 aaKnown RBP14.92□□□□□ -0.02
MED28-203ENST00000503945 NOM1Q5C9Z4 860 aaKnown RBP14.92□□□□□ -0.02
MED28-203ENST00000503945 MIER1Q8N108 512 aa14.92□□□□□ -0.02
MED28-203ENST00000503945 TBC1D22AQ8WUA7 517 aa14.92□□□□□ -0.02
MED28-203ENST00000503945 VEZTQ9HBM0 779 aa14.92□□□□□ -0.02
MED28-203ENST00000503945 SERPINA10Q9UK55 444 aa14.92□□□□□ -0.02
MED28-203ENST00000503945 FBXO3Q9UK99 471 aa14.92□□□□□ -0.02
MED28-203ENST00000503945 CLRN2A0PK11 232 aa14.91□□□□□ -0.02
MED28-203ENST00000503945 FKTNO75072 461 aa14.91□□□□□ -0.02
MED28-203ENST00000503945 RFX5P48382 616 aaPredicted RBP14.91□□□□□ -0.02
MED28-203ENST00000503945 SREBF2Q12772 1141 aa14.91□□□□□ -0.02
MED28-203ENST00000503945 CHAF1AQ13111 956 aaPredicted RBP14.91□□□□□ -0.02
MED28-203ENST00000503945 VGLL2Q8N8G2 317 aa14.91□□□□□ -0.02
MED28-203ENST00000503945 LPIN2Q92539 896 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms