RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 HACL1Q9UJ83 578 aa20.31■□□□□ 0.84
SCLT1-205ENST00000503401 COL1A1P02452 1464 aaPredicted RBP20.3■□□□□ 0.84
SCLT1-205ENST00000503401 SMARCA5O60264 1052 aaPredicted RBP20.3■□□□□ 0.84
SCLT1-205ENST00000503401 RAB11FIP3O75154 756 aa20.3■□□□□ 0.84
SCLT1-205ENST00000503401 GORABQ5T7V8 394 aa20.3■□□□□ 0.84
SCLT1-205ENST00000503401 AACSQ86V21 672 aa20.3■□□□□ 0.84
SCLT1-205ENST00000503401 CERS5Q8N5B7 392 aa20.3■□□□□ 0.84
SCLT1-205ENST00000503401 CNOT7Q9UIV1 285 aaKnown RBP20.3■□□□□ 0.84
SCLT1-205ENST00000503401 IQCA1LA6NCM1 817 aa20.29■□□□□ 0.84
SCLT1-205ENST00000503401 MICALL2Q8IY33 904 aa20.29■□□□□ 0.84
SCLT1-205ENST00000503401 TAF1DQ9H5J8 278 aaPredicted RBP20.29■□□□□ 0.84
SCLT1-205ENST00000503401 DBNLQ9UJU6 430 aaKnown RBP20.29■□□□□ 0.84
SCLT1-205ENST00000503401 EPHX2P34913 555 aa20.28■□□□□ 0.84
SCLT1-205ENST00000503401 GMLQ99445 158 aa20.28■□□□□ 0.84
SCLT1-205ENST00000503401 GNL3LQ9NVN8 582 aaKnown RBP20.28■□□□□ 0.84
SCLT1-205ENST00000503401 FAM205AQ6ZU69 1335 aa20.28■□□□□ 0.84
SCLT1-205ENST00000503401 RPS12P25398 132 aaKnown RBP20.27■□□□□ 0.84
SCLT1-205ENST00000503401 HDAC1Q13547 482 aaPredicted RBP20.27■□□□□ 0.84
SCLT1-205ENST00000503401 AGBL3Q8NEM8 1001 aa20.27■□□□□ 0.84
SCLT1-205ENST00000503401 DPF2Q92785 391 aa20.27■□□□□ 0.84
SCLT1-205ENST00000503401 LRRCC1Q9C099 1032 aa20.27■□□□□ 0.84
SCLT1-205ENST00000503401 F8W031 263 aaPredicted RBP20.27■□□□□ 0.83
SCLT1-205ENST00000503401 POTEIP0CG38 1075 aa20.27■□□□□ 0.83
SCLT1-205ENST00000503401 POTEJP0CG39 1038 aa20.27■□□□□ 0.83
SCLT1-205ENST00000503401 EAPPQ56P03 285 aaPredicted RBP20.27■□□□□ 0.83
SCLT1-205ENST00000503401 MFSD14BQ5SR56 506 aa20.27■□□□□ 0.83
SCLT1-205ENST00000503401 KIAA0825Q8IV33 1275 aa20.27■□□□□ 0.83
SCLT1-205ENST00000503401 CLASRPQ8N2M8 674 aaKnown RBP20.27■□□□□ 0.83
SCLT1-205ENST00000503401 EGFRP00533 1210 aa20.26■□□□□ 0.83
SCLT1-205ENST00000503401 IGHDP01880 384 aa20.26■□□□□ 0.83
SCLT1-205ENST00000503401 RASGRF1Q13972 1273 aa20.26■□□□□ 0.83
SCLT1-205ENST00000503401 SAMD7Q7Z3H4 446 aa20.26■□□□□ 0.83
SCLT1-205ENST00000503401 H7C1D1 291 aa20.25■□□□□ 0.83
SCLT1-205ENST00000503401 GRIK5Q16478 980 aa20.25■□□□□ 0.83
SCLT1-205ENST00000503401 RBM26Q5T8P6 1007 aaKnown RBP20.25■□□□□ 0.83
SCLT1-205ENST00000503401 PI16Q6UXB8 463 aa20.25■□□□□ 0.83
SCLT1-205ENST00000503401 C16orf71Q8IYS4 520 aaPredicted RBP20.25■□□□□ 0.83
SCLT1-205ENST00000503401 TRPM4Q8TD43 1214 aa20.25■□□□□ 0.83
SCLT1-205ENST00000503401 MYO3BQ8WXR4 1341 aa20.25■□□□□ 0.83
SCLT1-205ENST00000503401 USP17L8P0C7I0 530 aa20.24■□□□□ 0.83
SCLT1-205ENST00000503401 SCARF1Q14162 830 aa20.24■□□□□ 0.83
SCLT1-205ENST00000503401 TBC1D10BQ4KMP7 808 aaPredicted RBP20.24■□□□□ 0.83
SCLT1-205ENST00000503401 TTC39AQ5SRH9 613 aa20.24■□□□□ 0.83
SCLT1-205ENST00000503401 ADARB2Q9NS39 739 aaKnown RBP20.24■□□□□ 0.83
SCLT1-205ENST00000503401 AKAP11Q9UKA4 1901 aa20.24■□□□□ 0.83
SCLT1-205ENST00000503401 IFIT2P09913 472 aaKnown RBP20.24■□□□□ 0.83
SCLT1-205ENST00000503401 CCDC158Q5M9N0 1113 aa20.24■□□□□ 0.83
SCLT1-205ENST00000503401 RWDD1Q9H446 243 aaPredicted RBP20.24■□□□□ 0.83
SCLT1-205ENST00000503401 DENND2AQ9ULE3 1009 aa20.24■□□□□ 0.83
SCLT1-205ENST00000503401 ARID4AP29374 1257 aaPredicted RBP20.23■□□□□ 0.83
SCLT1-205ENST00000503401 MCAMP43121 646 aa20.23■□□□□ 0.83
SCLT1-205ENST00000503401 FKBP1AP62942 108 aaKnown RBP20.23■□□□□ 0.83
SCLT1-205ENST00000503401 ADAMTSL1Q8N6G6 1762 aa20.22■□□□□ 0.83
SCLT1-205ENST00000503401 SEMA3EO15041 775 aa20.22■□□□□ 0.83
SCLT1-205ENST00000503401 HIRAP54198 1017 aaPredicted RBP20.22■□□□□ 0.83
SCLT1-205ENST00000503401 ZNF280AP59817 542 aaPredicted RBP20.22■□□□□ 0.83
SCLT1-205ENST00000503401 SNRKQ9NRH2 765 aa20.22■□□□□ 0.83
SCLT1-205ENST00000503401 HMG20BQ9P0W2 317 aa20.22■□□□□ 0.83
SCLT1-205ENST00000503401 UQCRFS1P1P0C7P4 283 aa20.21■□□□□ 0.83
SCLT1-205ENST00000503401 PNMA8AQ86V59 439 aaPredicted RBP20.21■□□□□ 0.83
SCLT1-205ENST00000503401 OGFOD1Q8N543 542 aa20.21■□□□□ 0.83
SCLT1-205ENST00000503401 SPATA5Q8NB90 893 aa20.21■□□□□ 0.83
SCLT1-205ENST00000503401 WDR66Q8TBY9 1149 aa20.21■□□□□ 0.83
SCLT1-205ENST00000503401 TBC1D22AQ8WUA7 517 aa20.21■□□□□ 0.83
SCLT1-205ENST00000503401 GCC1Q96CN9 775 aa20.21■□□□□ 0.83
SCLT1-205ENST00000503401 MYOZ2Q9NPC6 264 aa20.21■□□□□ 0.83
SCLT1-205ENST00000503401 TTF2Q9UNY4 1162 aaKnown RBP20.21■□□□□ 0.83
SCLT1-205ENST00000503401 CLEC11AQ9Y240 323 aa20.21■□□□□ 0.83
SCLT1-205ENST00000503401 KIF4BQ2VIQ3 1234 aa20.2■□□□□ 0.82
SCLT1-205ENST00000503401 ANKRD45Q5TZF3 282 aa20.2■□□□□ 0.82
SCLT1-205ENST00000503401 USP50Q70EL3 339 aaPredicted RBP20.2■□□□□ 0.82
SCLT1-205ENST00000503401 PCDHAC2Q9Y5I4 1007 aa20.2■□□□□ 0.82
SCLT1-205ENST00000503401 NDUFB9Q9Y6M9 179 aa20.2■□□□□ 0.82
SCLT1-205ENST00000503401 POLR2AP24928 1970 aaKnown RBP20.2■□□□□ 0.82
SCLT1-205ENST00000503401 MYO5AQ9Y4I1 1855 aaKnown RBP20.2■□□□□ 0.82
SCLT1-205ENST00000503401 TOMM70O94826 608 aa20.2■□□□□ 0.82
SCLT1-205ENST00000503401 B4GALNT3Q6L9W6 998 aa20.2■□□□□ 0.82
SCLT1-205ENST00000503401 HDAC9Q9UKV0 1011 aa20.2■□□□□ 0.82
SCLT1-205ENST00000503401 PRDX5P30044 214 aa20.19■□□□□ 0.82
SCLT1-205ENST00000503401 TBC1D9Q6ZT07 1266 aa20.19■□□□□ 0.82
SCLT1-205ENST00000503401 ABCF2Q9UG63 623 aa20.19■□□□□ 0.82
SCLT1-205ENST00000503401 ASTN2O75129 1339 aaPredicted RBP20.18■□□□□ 0.82
SCLT1-205ENST00000503401 LDHDQ86WU2 507 aa20.18■□□□□ 0.82
SCLT1-205ENST00000503401 SMC5Q8IY18 1101 aa20.18■□□□□ 0.82
SCLT1-205ENST00000503401 PDS5AQ29RF7 1337 aaKnown RBP20.17■□□□□ 0.82
SCLT1-205ENST00000503401 ZBTB22O15209 634 aa20.17■□□□□ 0.82
SCLT1-205ENST00000503401 NEFLP07196 543 aa20.17■□□□□ 0.82
SCLT1-205ENST00000503401 OTUD7AQ8TE49 926 aaPredicted RBP20.17■□□□□ 0.82
SCLT1-205ENST00000503401 ZNF512BQ96KM6 892 aaPredicted RBP20.17■□□□□ 0.82
SCLT1-205ENST00000503401 SALL1Q9NSC2 1324 aa20.17■□□□□ 0.82
SCLT1-205ENST00000503401 ZAP70P43403 619 aa20.16■□□□□ 0.82
SCLT1-205ENST00000503401 NBPF9Q3BBW0 867 aa20.16■□□□□ 0.82
SCLT1-205ENST00000503401 TSHZ3Q63HK5 1081 aa20.16■□□□□ 0.82
SCLT1-205ENST00000503401 MAP1SQ66K74 1059 aaPredicted RBP20.16■□□□□ 0.82
SCLT1-205ENST00000503401 RBM46Q8TBY0 533 aaKnown RBP20.16■□□□□ 0.82
SCLT1-205ENST00000503401 LDHBP07195 334 aaKnown RBP20.16■□□□□ 0.82
SCLT1-205ENST00000503401 RBM5P52756 815 aaKnown RBP eCLIP20.16■□□□□ 0.82
SCLT1-205ENST00000503401 CFAP100Q494V2 611 aa20.16■□□□□ 0.82
SCLT1-205ENST00000503401 ZBTB47Q9UFB7 747 aaPredicted RBP20.16■□□□□ 0.82
SCLT1-205ENST00000503401 AOX1Q06278 1338 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms