RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 NBPF12Q5TAG4 269 aaPredicted RBP6.58□□□□□ -1.36
HTT-202ENST00000502820 ANKRD13AQ8IZ07 590 aa6.58□□□□□ -1.36
HTT-202ENST00000502820 FAM43AQ8N2R8 423 aa6.58□□□□□ -1.36
HTT-202ENST00000502820 JARID2Q92833 1246 aaPredicted RBP6.58□□□□□ -1.36
HTT-202ENST00000502820 CPA4Q9UI42 421 aa6.58□□□□□ -1.36
HTT-202ENST00000502820 SIPA1L3O60292 1781 aaPredicted RBP6.57□□□□□ -1.36
HTT-202ENST00000502820 TRIOBPQ9H2D6 2365 aa6.57□□□□□ -1.36
HTT-202ENST00000502820 IRS4O14654 1257 aaPredicted RBP6.57□□□□□ -1.36
HTT-202ENST00000502820 MYO1BO43795 1136 aa6.57□□□□□ -1.36
HTT-202ENST00000502820 GJB1P08034 283 aa6.57□□□□□ -1.36
HTT-202ENST00000502820 GTF2IP78347 998 aa6.57□□□□□ -1.36
HTT-202ENST00000502820 DDX10Q13206 875 aaKnown RBP6.57□□□□□ -1.36
HTT-202ENST00000502820 RALBP1Q15311 655 aa6.57□□□□□ -1.36
HTT-202ENST00000502820 TTLL5Q6EMB2 1281 aa6.57□□□□□ -1.36
HTT-202ENST00000502820 PNISRQ8TF01 805 aaKnown RBP6.57□□□□□ -1.36
HTT-202ENST00000502820 BRI3BPQ8WY22 251 aa6.57□□□□□ -1.36
HTT-202ENST00000502820 DDRGK1Q96HY6 314 aa6.57□□□□□ -1.36
HTT-202ENST00000502820 PAWRQ96IZ0 340 aaKnown RBP6.57□□□□□ -1.36
HTT-202ENST00000502820 CCDC136Q96JN2 1154 aa6.57□□□□□ -1.36
HTT-202ENST00000502820 DEFB118Q96PH6 123 aa6.57□□□□□ -1.36
HTT-202ENST00000502820 GMLQ99445 158 aa6.57□□□□□ -1.36
HTT-202ENST00000502820 UNC93B1Q9H1C4 597 aa6.57□□□□□ -1.36
HTT-202ENST00000502820 TSPYL4Q9UJ04 414 aa6.57□□□□□ -1.36
HTT-202ENST00000502820 PCDHAC2Q9Y5I4 1007 aa6.57□□□□□ -1.36
HTT-202ENST00000502820 HTTP42858 3142 aa6.56□□□□□ -1.36
HTT-202ENST00000502820 MYPNQ86TC9 1320 aa6.56□□□□□ -1.36
HTT-202ENST00000502820 USP2O75604 605 aaPredicted RBP6.56□□□□□ -1.36
HTT-202ENST00000502820 MS4A1P11836 297 aa6.56□□□□□ -1.36
HTT-202ENST00000502820 OSBPP22059 807 aa6.56□□□□□ -1.36
HTT-202ENST00000502820 ATP2B4P23634 1241 aa6.56□□□□□ -1.36
HTT-202ENST00000502820 MAGEA10P43363 369 aaPredicted RBP6.56□□□□□ -1.36
HTT-202ENST00000502820 GTF2A2P52657 109 aa6.56□□□□□ -1.36
HTT-202ENST00000502820 DACT2Q5SW24 774 aa6.56□□□□□ -1.36
HTT-202ENST00000502820 ANKRD18AQ8IVF6 992 aa6.56□□□□□ -1.36
HTT-202ENST00000502820 TDHQ8IZJ6 230 aa6.56□□□□□ -1.36
HTT-202ENST00000502820 MAFAQ8NHW3 353 aaPredicted RBP6.56□□□□□ -1.36
HTT-202ENST00000502820 JAG2Q9Y219 1238 aa6.56□□□□□ -1.36
HTT-202ENST00000502820 CSADQ9Y600 493 aa6.56□□□□□ -1.36
HTT-202ENST00000502820 TLR2O60603 784 aa6.55□□□□□ -1.36
HTT-202ENST00000502820 SGPL1O95470 568 aa6.55□□□□□ -1.36
HTT-202ENST00000502820 ELNP15502 786 aa6.55□□□□□ -1.36
HTT-202ENST00000502820 KCNJ4P48050 445 aa6.55□□□□□ -1.36
HTT-202ENST00000502820 HNRNPUQ00839 825 aaKnown RBP eCLIP6.55□□□□□ -1.36
HTT-202ENST00000502820 MDM2Q00987 491 aaPredicted RBP6.55□□□□□ -1.36
HTT-202ENST00000502820 RASA3Q14644 834 aa6.55□□□□□ -1.36
HTT-202ENST00000502820 SF3B3Q15393 1217 aaKnown RBP6.55□□□□□ -1.36
HTT-202ENST00000502820 NFE2L2Q16236 605 aa6.55□□□□□ -1.36
HTT-202ENST00000502820 NECAB2Q7Z6G3 386 aa6.55□□□□□ -1.36
HTT-202ENST00000502820 DIS3LQ8TF46 1054 aaKnown RBP6.55□□□□□ -1.36
HTT-202ENST00000502820 SYMPKQ92797 1274 aaKnown RBP6.55□□□□□ -1.36
HTT-202ENST00000502820 PODXL2Q9NZ53 605 aa6.55□□□□□ -1.36
HTT-202ENST00000502820 SRRDQ9UH36 339 aa6.55□□□□□ -1.36
HTT-202ENST00000502820 LAS1LQ9Y4W2 734 aaKnown RBP6.55□□□□□ -1.36
HTT-202ENST00000502820 DUOX1Q9NRD9 1551 aa6.55□□□□□ -1.36
HTT-202ENST00000502820 XDHP47989 1333 aa6.54□□□□□ -1.36
HTT-202ENST00000502820 ERBB4Q15303 1308 aa6.54□□□□□ -1.36
HTT-202ENST00000502820 MYO3BQ8WXR4 1341 aa6.54□□□□□ -1.36
HTT-202ENST00000502820 MYBBP1AQ9BQG0 1328 aaKnown RBP6.54□□□□□ -1.36
HTT-202ENST00000502820 TCP10L2B9ZVM9 353 aa6.54□□□□□ -1.36
HTT-202ENST00000502820 BTBD19C9JJ37 291 aa6.54□□□□□ -1.36
HTT-202ENST00000502820 PLA2G5P39877 138 aa6.54□□□□□ -1.36
HTT-202ENST00000502820 PRMT2P55345 433 aa6.54□□□□□ -1.36
HTT-202ENST00000502820 PRKCZQ05513 592 aa6.54□□□□□ -1.36
HTT-202ENST00000502820 PDIA6Q15084 440 aa6.54□□□□□ -1.36
HTT-202ENST00000502820 CFAP100Q494V2 611 aa6.54□□□□□ -1.36
HTT-202ENST00000502820 CCDC152Q4G0S7 254 aa6.54□□□□□ -1.36
HTT-202ENST00000502820 ZNF697Q5TEC3 545 aa6.54□□□□□ -1.36
HTT-202ENST00000502820 STRIP1Q5VSL9 837 aa6.54□□□□□ -1.36
HTT-202ENST00000502820 GPR153Q6NV75 609 aa6.54□□□□□ -1.36
HTT-202ENST00000502820 PPM1EQ8WY54 764 aa6.54□□□□□ -1.36
HTT-202ENST00000502820 MS4A4AQ96JQ5 239 aa6.54□□□□□ -1.36
HTT-202ENST00000502820 GUCD1Q96NT3 240 aa6.54□□□□□ -1.36
HTT-202ENST00000502820 GDF15Q99988 308 aa6.54□□□□□ -1.36
HTT-202ENST00000502820 RANBP2P49792 3224 aaKnown RBP6.54□□□□□ -1.36
HTT-202ENST00000502820 UNC80Q8N2C7 3258 aa6.53□□□□□ -1.36
HTT-202ENST00000502820 TESPA1A2RU30 521 aaPredicted RBP6.53□□□□□ -1.36
HTT-202ENST00000502820 TNFRSF10AO00220 468 aa6.53□□□□□ -1.36
HTT-202ENST00000502820 ADCY3O60266 1144 aa6.53□□□□□ -1.36
HTT-202ENST00000502820 GNRH1P01148 92 aa6.53□□□□□ -1.36
HTT-202ENST00000502820 INHAP05111 366 aa6.53□□□□□ -1.36
HTT-202ENST00000502820 CETPP11597 493 aa6.53□□□□□ -1.36
HTT-202ENST00000502820 CTGFP29279 349 aa6.53□□□□□ -1.36
HTT-202ENST00000502820 MAP3K9P80192 1104 aa6.53□□□□□ -1.36
HTT-202ENST00000502820 VGLL4Q14135 290 aa6.53□□□□□ -1.36
HTT-202ENST00000502820 MAP3K11Q16584 847 aa6.53□□□□□ -1.36
HTT-202ENST00000502820 LRIT3Q3SXY7 679 aa6.53□□□□□ -1.36
HTT-202ENST00000502820 RIC3Q7Z5B4 369 aa6.53□□□□□ -1.36
HTT-202ENST00000502820 UBE2Q1Q7Z7E8 422 aa6.53□□□□□ -1.36
HTT-202ENST00000502820 MYLIPQ8WY64 445 aa6.53□□□□□ -1.36
HTT-202ENST00000502820 COA1Q9GZY4 146 aa6.53□□□□□ -1.36
HTT-202ENST00000502820 PNNQ9H307 717 aaKnown RBP6.53□□□□□ -1.36
HTT-202ENST00000502820 GABRQQ9UN88 632 aa6.53□□□□□ -1.36
HTT-202ENST00000502820 MAPK8IP3Q9UPT6 1336 aa6.52□□□□□ -1.37
HTT-202ENST00000502820 POLR2AP24928 1970 aaKnown RBP6.52□□□□□ -1.37
HTT-202ENST00000502820 PDHXO00330 501 aa6.52□□□□□ -1.37
HTT-202ENST00000502820 BMP8BP34820 402 aa6.52□□□□□ -1.37
HTT-202ENST00000502820 CCT4P50991 539 aaKnown RBP6.52□□□□□ -1.37
HTT-202ENST00000502820 FCGRTP55899 365 aa6.52□□□□□ -1.37
HTT-202ENST00000502820 MAP3K12Q12852 859 aa6.52□□□□□ -1.37
HTT-202ENST00000502820 SNAPC2Q13487 334 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms