RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 PRKRIP1Q9H875 184 aaPredicted RBP5.69□□□□□ -1.5
MATR3-202ENST00000502422 NUDCQ9Y266 331 aa5.69□□□□□ -1.5
MATR3-202ENST00000502422 POLR2AP24928 1970 aaKnown RBP5.69□□□□□ -1.5
MATR3-202ENST00000502422 FRAT2O75474 233 aaPredicted RBP5.69□□□□□ -1.5
MATR3-202ENST00000502422 SP8Q8IXZ3 490 aa5.69□□□□□ -1.5
MATR3-202ENST00000502422 DPF2Q92785 391 aa5.69□□□□□ -1.5
MATR3-202ENST00000502422 PHACTR3Q96KR7 559 aa5.69□□□□□ -1.5
MATR3-202ENST00000502422 UBN2Q6ZU65 1347 aa5.68□□□□□ -1.5
MATR3-202ENST00000502422 HSP90AA1P07900 732 aaKnown RBP5.68□□□□□ -1.5
MATR3-202ENST00000502422 BRD2P25440 801 aaKnown RBP5.68□□□□□ -1.5
MATR3-202ENST00000502422 SLC4A3P48751 1232 aa5.68□□□□□ -1.5
MATR3-202ENST00000502422 DCTN1Q14203 1278 aa5.68□□□□□ -1.5
MATR3-202ENST00000502422 TAF7Q15545 349 aaPredicted RBP5.68□□□□□ -1.5
MATR3-202ENST00000502422 PARP10Q53GL7 1025 aa5.68□□□□□ -1.5
MATR3-202ENST00000502422 INTS3Q68E01 1043 aaKnown RBP5.68□□□□□ -1.5
MATR3-202ENST00000502422 TTLL7Q6ZT98 887 aa5.68□□□□□ -1.5
MATR3-202ENST00000502422 DDX46Q7L014 1031 aaKnown RBP5.68□□□□□ -1.5
MATR3-202ENST00000502422 SLC51AQ86UW1 340 aa5.68□□□□□ -1.5
MATR3-202ENST00000502422 CFAP53Q96M91 514 aa5.68□□□□□ -1.5
MATR3-202ENST00000502422 RTFDC1Q9BY42 306 aaPredicted RBP5.68□□□□□ -1.5
MATR3-202ENST00000502422 KDM4CQ9H3R0 1056 aa5.68□□□□□ -1.5
MATR3-202ENST00000502422 RIC1Q4ADV7 1423 aa5.68□□□□□ -1.5
MATR3-202ENST00000502422 ABCC4O15439 1325 aa5.68□□□□□ -1.5
MATR3-202ENST00000502422 SHTN1A0MZ66 631 aa5.68□□□□□ -1.5
MATR3-202ENST00000502422 ADM5C9JUS6 153 aa5.68□□□□□ -1.5
MATR3-202ENST00000502422 NTSR2O95665 410 aa5.68□□□□□ -1.5
MATR3-202ENST00000502422 SLC10A3P09131 477 aa5.68□□□□□ -1.5
MATR3-202ENST00000502422 WASHC4Q2M389 1173 aa5.68□□□□□ -1.5
MATR3-202ENST00000502422 GIGYF2Q6Y7W6 1299 aaKnown RBP5.68□□□□□ -1.5
MATR3-202ENST00000502422 ZNF454Q8N9F8 522 aa5.68□□□□□ -1.5
MATR3-202ENST00000502422 DDRGK1Q96HY6 314 aa5.68□□□□□ -1.5
MATR3-202ENST00000502422 UTP14AQ9BVJ6 771 aaKnown RBP5.68□□□□□ -1.5
MATR3-202ENST00000502422 MIS18AQ9NYP9 233 aa5.68□□□□□ -1.5
MATR3-202ENST00000502422 MKI67P46013 3256 aaKnown RBP5.68□□□□□ -1.5
MATR3-202ENST00000502422 IBTKQ9P2D0 1353 aaPredicted RBP5.67□□□□□ -1.5
MATR3-202ENST00000502422 YDJCA8MPS7 323 aa5.67□□□□□ -1.5
MATR3-202ENST00000502422 C6orf229H3BNL8 230 aa5.67□□□□□ -1.5
MATR3-202ENST00000502422 PSMD14O00487 310 aa5.67□□□□□ -1.5
MATR3-202ENST00000502422 RIMBP2O15034 1052 aa5.67□□□□□ -1.5
MATR3-202ENST00000502422 TBC1D8O95759 1140 aa5.67□□□□□ -1.5
MATR3-202ENST00000502422 U2AF1L5P0DN76 240 aaPredicted RBP5.67□□□□□ -1.5
MATR3-202ENST00000502422 RPS12P25398 132 aaKnown RBP5.67□□□□□ -1.5
MATR3-202ENST00000502422 CLCN1P35523 988 aa5.67□□□□□ -1.5
MATR3-202ENST00000502422 FXR1P51114 621 aaKnown RBP eCLIP5.67□□□□□ -1.5
MATR3-202ENST00000502422 U2AF1Q01081 240 aaKnown RBP eCLIP5.67□□□□□ -1.5
MATR3-202ENST00000502422 FBXO46Q6PJ61 603 aaPredicted RBP5.67□□□□□ -1.5
MATR3-202ENST00000502422 ZNF34Q8IZ26 560 aa5.67□□□□□ -1.5
MATR3-202ENST00000502422 ZNF296Q8WUU4 475 aaPredicted RBP5.67□□□□□ -1.5
MATR3-202ENST00000502422 DBNDD1Q9H9R9 158 aa5.67□□□□□ -1.5
MATR3-202ENST00000502422 ZSWIM6Q9HCJ5 1215 aa5.67□□□□□ -1.5
MATR3-202ENST00000502422 MRS2Q9HD23 443 aa5.67□□□□□ -1.5
MATR3-202ENST00000502422 NSFL1CQ9UNZ2 370 aaKnown RBP5.67□□□□□ -1.5
MATR3-202ENST00000502422 HTATSF1O43719 755 aaKnown RBP5.67□□□□□ -1.5
MATR3-202ENST00000502422 KIF4BQ2VIQ3 1234 aa5.67□□□□□ -1.5
MATR3-202ENST00000502422 C6orf132Q5T0Z8 1188 aa5.67□□□□□ -1.5
MATR3-202ENST00000502422 PNISRQ8TF01 805 aaKnown RBP5.67□□□□□ -1.5
MATR3-202ENST00000502422 FBXW7Q969H0 707 aa5.67□□□□□ -1.5
MATR3-202ENST00000502422 NAP1L5Q96NT1 182 aaPredicted RBP5.67□□□□□ -1.5
MATR3-202ENST00000502422 ADAM33Q9BZ11 813 aa5.67□□□□□ -1.5
MATR3-202ENST00000502422 LHX6Q9UPM6 363 aa5.67□□□□□ -1.5
MATR3-202ENST00000502422 RGS20O76081 388 aa5.66□□□□□ -1.5
MATR3-202ENST00000502422 EGFRP00533 1210 aa5.66□□□□□ -1.5
MATR3-202ENST00000502422 GRAPQ13588 217 aa5.66□□□□□ -1.5
MATR3-202ENST00000502422 TTLL12Q14166 644 aaPredicted RBP5.66□□□□□ -1.5
MATR3-202ENST00000502422 SLC10A5Q5PT55 438 aa5.66□□□□□ -1.5
MATR3-202ENST00000502422 TMC4Q7Z404 712 aa5.66□□□□□ -1.5
MATR3-202ENST00000502422 SLC17A8Q8NDX2 589 aa5.66□□□□□ -1.5
MATR3-202ENST00000502422 GRAPLQ8TC17 118 aaPredicted RBP5.66□□□□□ -1.5
MATR3-202ENST00000502422 ZDHHC16Q969W1 377 aa5.66□□□□□ -1.5
MATR3-202ENST00000502422 CDCA5Q96FF9 252 aa5.66□□□□□ -1.5
MATR3-202ENST00000502422 EYA3Q99504 573 aa5.66□□□□□ -1.5
MATR3-202ENST00000502422 GGA3Q9NZ52 723 aa5.66□□□□□ -1.5
MATR3-202ENST00000502422 CENPFP49454 3210 aa5.66□□□□□ -1.5
MATR3-202ENST00000502422 POTEB3A0JP26 581 aa5.65□□□□□ -1.5
MATR3-202ENST00000502422 GPR25O00155 361 aa5.65□□□□□ -1.5
MATR3-202ENST00000502422 HCLS1P14317 486 aaPredicted RBP5.65□□□□□ -1.5
MATR3-202ENST00000502422 FKBP1BP68106 108 aa5.65□□□□□ -1.5
MATR3-202ENST00000502422 CALD1Q05682 793 aaKnown RBP5.65□□□□□ -1.5
MATR3-202ENST00000502422 AMHR2Q16671 573 aa5.65□□□□□ -1.5
MATR3-202ENST00000502422 POTEBQ6S5H4 581 aa5.65□□□□□ -1.5
MATR3-202ENST00000502422 RASAL3Q86YV0 1011 aa5.65□□□□□ -1.5
MATR3-202ENST00000502422 ZNF710Q8N1W2 664 aa5.65□□□□□ -1.5
MATR3-202ENST00000502422 EXOC6Q8TAG9 804 aa5.65□□□□□ -1.5
MATR3-202ENST00000502422 TRMT112Q9UI30 125 aaKnown RBP5.65□□□□□ -1.5
MATR3-202ENST00000502422 PER1O15534 1290 aaPredicted RBP5.65□□□□□ -1.51
MATR3-202ENST00000502422 ECE2O60344 883 aa5.65□□□□□ -1.51
MATR3-202ENST00000502422 FKTNO75072 461 aa5.65□□□□□ -1.51
MATR3-202ENST00000502422 EIF2S2P20042 333 aaKnown RBP5.65□□□□□ -1.51
MATR3-202ENST00000502422 HSP90AB3PQ58FF7 597 aa5.65□□□□□ -1.51
MATR3-202ENST00000502422 ANGEL2Q5VTE6 544 aaKnown RBP5.65□□□□□ -1.51
MATR3-202ENST00000502422 PARP9Q8IXQ6 854 aa5.65□□□□□ -1.51
MATR3-202ENST00000502422 ZC3H12CQ9C0D7 883 aaKnown RBP5.65□□□□□ -1.51
MATR3-202ENST00000502422 PNNQ9H307 717 aaKnown RBP5.65□□□□□ -1.51
MATR3-202ENST00000502422 LAMB4A4D0S4 1761 aa5.65□□□□□ -1.51
MATR3-202ENST00000502422 NF2P35240 595 aa5.64□□□□□ -1.51
MATR3-202ENST00000502422 PDE4CQ08493 712 aa5.64□□□□□ -1.51
MATR3-202ENST00000502422 SREBF2Q12772 1141 aa5.64□□□□□ -1.51
MATR3-202ENST00000502422 SKAP1Q86WV1 359 aa5.64□□□□□ -1.51
MATR3-202ENST00000502422 PHOX2BQ99453 314 aa5.64□□□□□ -1.51
MATR3-202ENST00000502422 THUMPD2Q9BTF0 503 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms