RNA–Protein interactions for RNA: ENST00000502279.2

CHFR-207, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 1,423 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-207ENST00000502279 PDS5AQ29RF7 1337 aaKnown RBP16.75■□□□□ 0.27
CHFR-207ENST00000502279 MYH2Q9UKX2 1941 aa16.74■□□□□ 0.27
CHFR-207ENST00000502279 KIF3CO14782 793 aa16.74■□□□□ 0.27
CHFR-207ENST00000502279 PHKA1P46020 1223 aa16.74■□□□□ 0.27
CHFR-207ENST00000502279 GTF2IP78347 998 aa16.74■□□□□ 0.27
CHFR-207ENST00000502279 CCDC102BQ68D86 513 aa16.74■□□□□ 0.27
CHFR-207ENST00000502279 PPP4R3CPQ6ZMV5 832 aa16.74■□□□□ 0.27
CHFR-207ENST00000502279 NEUROD6Q96NK8 337 aa16.74■□□□□ 0.27
CHFR-207ENST00000502279 GNL3LQ9NVN8 582 aaKnown RBP16.74■□□□□ 0.27
CHFR-207ENST00000502279 HACL1Q9UJ83 578 aa16.74■□□□□ 0.27
CHFR-207ENST00000502279 ZBTB12Q9Y330 459 aaPredicted RBP16.74■□□□□ 0.27
CHFR-207ENST00000502279 EAF2Q96CJ1 260 aaPredicted RBP16.73■□□□□ 0.27
CHFR-207ENST00000502279 LRRCC1Q9C099 1032 aa16.73■□□□□ 0.27
CHFR-207ENST00000502279 TAF1DQ9H5J8 278 aaPredicted RBP16.73■□□□□ 0.27
CHFR-207ENST00000502279 RRAGCQ9HB90 399 aa16.73■□□□□ 0.27
CHFR-207ENST00000502279 DBNLQ9UJU6 430 aaKnown RBP16.73■□□□□ 0.27
CHFR-207ENST00000502279 POLR2AP24928 1970 aaKnown RBP16.73■□□□□ 0.27
CHFR-207ENST00000502279 CLASRPQ8N2M8 674 aaKnown RBP16.72■□□□□ 0.27
CHFR-207ENST00000502279 FBXW7Q969H0 707 aa16.72■□□□□ 0.27
CHFR-207ENST00000502279 DBNDD2Q9BQY9 259 aa16.72■□□□□ 0.27
CHFR-207ENST00000502279 IL1RAPL2Q9NP60 686 aa16.72■□□□□ 0.27
CHFR-207ENST00000502279 IQSEC3Q9UPP2 1182 aaPredicted RBP16.72■□□□□ 0.27
CHFR-207ENST00000502279 APBB1O00213 710 aa16.71■□□□□ 0.27
CHFR-207ENST00000502279 FRAT2O75474 233 aaPredicted RBP16.71■□□□□ 0.27
CHFR-207ENST00000502279 ARID4AP29374 1257 aaPredicted RBP16.71■□□□□ 0.27
CHFR-207ENST00000502279 EPHX2P34913 555 aa16.71■□□□□ 0.27
CHFR-207ENST00000502279 MMP14P50281 582 aa16.71■□□□□ 0.27
CHFR-207ENST00000502279 MFSD14BQ5SR56 506 aa16.71■□□□□ 0.27
CHFR-207ENST00000502279 GORABQ5T7V8 394 aa16.71■□□□□ 0.27
CHFR-207ENST00000502279 AACSQ86V21 672 aa16.71■□□□□ 0.27
CHFR-207ENST00000502279 MICALL2Q8IY33 904 aa16.71■□□□□ 0.27
CHFR-207ENST00000502279 CERS5Q8N5B7 392 aa16.71■□□□□ 0.27
CHFR-207ENST00000502279 TBC1D22AQ8WUA7 517 aa16.71■□□□□ 0.27
CHFR-207ENST00000502279 TRPM7Q96QT4 1865 aa16.71■□□□□ 0.27
CHFR-207ENST00000502279 EPS15P42566 896 aa16.7■□□□□ 0.26
CHFR-207ENST00000502279 ZNF280AP59817 542 aaPredicted RBP16.7■□□□□ 0.26
CHFR-207ENST00000502279 RASGRF1Q13972 1273 aa16.7■□□□□ 0.26
CHFR-207ENST00000502279 PNMA8AQ86V59 439 aaPredicted RBP16.7■□□□□ 0.26
CHFR-207ENST00000502279 GCC1Q96CN9 775 aa16.7■□□□□ 0.26
CHFR-207ENST00000502279 ZNF512BQ96KM6 892 aaPredicted RBP16.7■□□□□ 0.26
CHFR-207ENST00000502279 MXD3Q9BW11 206 aa16.7■□□□□ 0.26
CHFR-207ENST00000502279 ADARB2Q9NS39 739 aaKnown RBP16.7■□□□□ 0.26
CHFR-207ENST00000502279 TLR7Q9NYK1 1049 aaKnown RBP16.7■□□□□ 0.26
CHFR-207ENST00000502279 CNOT7Q9UIV1 285 aaKnown RBP16.7■□□□□ 0.26
CHFR-207ENST00000502279 DENND2AQ9ULE3 1009 aa16.7■□□□□ 0.26
CHFR-207ENST00000502279 SALL1Q9NSC2 1324 aa16.7■□□□□ 0.26
CHFR-207ENST00000502279 USP17L8P0C7I0 530 aa16.7■□□□□ 0.26
CHFR-207ENST00000502279 UQCRFS1P1P0C7P4 283 aa16.7■□□□□ 0.26
CHFR-207ENST00000502279 WDR66Q8TBY9 1149 aa16.7■□□□□ 0.26
CHFR-207ENST00000502279 RWDD1Q9H446 243 aaPredicted RBP16.7■□□□□ 0.26
CHFR-207ENST00000502279 JAG2Q9Y219 1238 aa16.7■□□□□ 0.26
CHFR-207ENST00000502279 H7C1D1 291 aa16.69■□□□□ 0.26
CHFR-207ENST00000502279 CHAF1AQ13111 956 aaPredicted RBP16.69■□□□□ 0.26
CHFR-207ENST00000502279 CCDC158Q5M9N0 1113 aa16.69■□□□□ 0.26
CHFR-207ENST00000502279 USP50Q70EL3 339 aaPredicted RBP16.69■□□□□ 0.26
CHFR-207ENST00000502279 CCDC8Q9H0W5 538 aaPredicted RBP16.69■□□□□ 0.26
CHFR-207ENST00000502279 SUGT1Q9Y2Z0 365 aa16.69■□□□□ 0.26
CHFR-207ENST00000502279 AK9Q5TCS8 1911 aa16.68■□□□□ 0.26
CHFR-207ENST00000502279 SHTN1A0MZ66 631 aa16.68■□□□□ 0.26
CHFR-207ENST00000502279 IFIT2P09913 472 aaKnown RBP16.68■□□□□ 0.26
CHFR-207ENST00000502279 TTC39AQ5SRH9 613 aa16.68■□□□□ 0.26
CHFR-207ENST00000502279 KIAA0825Q8IV33 1275 aa16.68■□□□□ 0.26
CHFR-207ENST00000502279 SMC5Q8IY18 1101 aa16.68■□□□□ 0.26
CHFR-207ENST00000502279 C16orf71Q8IYS4 520 aaPredicted RBP16.68■□□□□ 0.26
CHFR-207ENST00000502279 OGFOD1Q8N543 542 aa16.68■□□□□ 0.26
CHFR-207ENST00000502279 CDK5RAP2Q96SN8 1893 aa16.68■□□□□ 0.26
CHFR-207ENST00000502279 FOCADQ5VW36 1801 aa16.67■□□□□ 0.26
CHFR-207ENST00000502279 TOMM70O94826 608 aa16.67■□□□□ 0.26
CHFR-207ENST00000502279 MCAMP43121 646 aa16.67■□□□□ 0.26
CHFR-207ENST00000502279 LDHDQ86WU2 507 aa16.67■□□□□ 0.26
CHFR-207ENST00000502279 ZGPATQ8N5A5 531 aaKnown RBP16.67■□□□□ 0.26
CHFR-207ENST00000502279 HMG20BQ9P0W2 317 aa16.67■□□□□ 0.26
CHFR-207ENST00000502279 HDAC9Q9UKV0 1011 aa16.67■□□□□ 0.26
CHFR-207ENST00000502279 MAST3O60307 1309 aa16.67■□□□□ 0.26
CHFR-207ENST00000502279 SCARF1Q14162 830 aa16.66■□□□□ 0.26
CHFR-207ENST00000502279 KIF4BQ2VIQ3 1234 aa16.66■□□□□ 0.26
CHFR-207ENST00000502279 SPATA5Q8NB90 893 aa16.66■□□□□ 0.26
CHFR-207ENST00000502279 RBM46Q8TBY0 533 aaKnown RBP16.66■□□□□ 0.26
CHFR-207ENST00000502279 TRPM4Q8TD43 1214 aa16.66■□□□□ 0.26
CHFR-207ENST00000502279 MYOZ2Q9NPC6 264 aa16.66■□□□□ 0.26
CHFR-207ENST00000502279 SMARCA5O60264 1052 aaPredicted RBP16.65■□□□□ 0.26
CHFR-207ENST00000502279 EGFRP00533 1210 aa16.65■□□□□ 0.26
CHFR-207ENST00000502279 EAPPQ56P03 285 aaPredicted RBP16.65■□□□□ 0.26
CHFR-207ENST00000502279 SAMD7Q7Z3H4 446 aa16.65■□□□□ 0.26
CHFR-207ENST00000502279 TTF2Q9UNY4 1162 aaKnown RBP16.65■□□□□ 0.26
CHFR-207ENST00000502279 IGHDP01880 384 aa16.64■□□□□ 0.25
CHFR-207ENST00000502279 NEFLP07196 543 aa16.64■□□□□ 0.25
CHFR-207ENST00000502279 POTEIP0CG38 1075 aa16.64■□□□□ 0.25
CHFR-207ENST00000502279 POTEJP0CG39 1038 aa16.64■□□□□ 0.25
CHFR-207ENST00000502279 TBC1D10BQ4KMP7 808 aaPredicted RBP16.64■□□□□ 0.25
CHFR-207ENST00000502279 PI16Q6UXB8 463 aa16.64■□□□□ 0.25
CHFR-207ENST00000502279 MTMR14Q8NCE2 650 aa16.64■□□□□ 0.25
CHFR-207ENST00000502279 ZC3H15Q8WU90 426 aaKnown RBP16.64■□□□□ 0.25
CHFR-207ENST00000502279 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.64■□□□□ 0.25
CHFR-207ENST00000502279 F8W031 263 aaPredicted RBP16.63■□□□□ 0.25
CHFR-207ENST00000502279 HIRAP54198 1017 aaPredicted RBP16.63■□□□□ 0.25
CHFR-207ENST00000502279 HDLBPQ00341 1268 aaKnown RBP16.63■□□□□ 0.25
CHFR-207ENST00000502279 GRIK5Q16478 980 aa16.63■□□□□ 0.25
CHFR-207ENST00000502279 SMC1BQ8NDV3 1235 aa16.63■□□□□ 0.25
CHFR-207ENST00000502279 ZBED3Q96IU2 234 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms