RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 PPP1R9BQ96SB3 815 aa10.59□□□□□ -0.71
FN1-227ENST00000498719 MAP3K2Q9Y2U5 619 aa10.59□□□□□ -0.71
FN1-227ENST00000498719 PIK3CDO00329 1044 aa10.58□□□□□ -0.72
FN1-227ENST00000498719 ATP2B4P23634 1241 aa10.58□□□□□ -0.72
FN1-227ENST00000498719 AKAP4Q5JQC9 854 aa10.58□□□□□ -0.72
FN1-227ENST00000498719 JADE2Q9NQC1 790 aa10.58□□□□□ -0.72
FN1-227ENST00000498719 LMO7Q8WWI1 1683 aa10.58□□□□□ -0.72
FN1-227ENST00000498719 RAD50Q92878 1312 aa10.58□□□□□ -0.72
FN1-227ENST00000498719 GCP02774 474 aa10.58□□□□□ -0.72
FN1-227ENST00000498719 INO80BQ9C086 356 aaPredicted RBP10.58□□□□□ -0.72
FN1-227ENST00000498719 LSG1Q9H089 658 aaKnown RBP10.58□□□□□ -0.72
FN1-227ENST00000498719 AXIN2Q9Y2T1 843 aa10.58□□□□□ -0.72
FN1-227ENST00000498719 SNX14Q9Y5W7 946 aa10.58□□□□□ -0.72
FN1-227ENST00000498719 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.58□□□□□ -0.72
FN1-227ENST00000498719 RNMTO43148 476 aaKnown RBP10.57□□□□□ -0.72
FN1-227ENST00000498719 P4HBP07237 508 aaKnown RBP10.57□□□□□ -0.72
FN1-227ENST00000498719 PLEKHO1Q53GL0 409 aaPredicted RBP10.57□□□□□ -0.72
FN1-227ENST00000498719 INTS4Q96HW7 963 aaKnown RBP10.57□□□□□ -0.72
FN1-227ENST00000498719 TPX2Q9ULW0 747 aaKnown RBP10.57□□□□□ -0.72
FN1-227ENST00000498719 GADD45BO75293 160 aaPredicted RBP10.57□□□□□ -0.72
FN1-227ENST00000498719 HOXB7P09629 217 aa10.57□□□□□ -0.72
FN1-227ENST00000498719 ANKLE2Q86XL3 938 aa10.57□□□□□ -0.72
FN1-227ENST00000498719 CNTROBQ8N137 903 aa10.57□□□□□ -0.72
FN1-227ENST00000498719 KCNH5Q8NCM2 988 aa10.57□□□□□ -0.72
FN1-227ENST00000498719 RNF214Q8ND24 703 aa10.57□□□□□ -0.72
FN1-227ENST00000498719 ANP32BQ92688 251 aaKnown RBP10.57□□□□□ -0.72
FN1-227ENST00000498719 C9orf78Q9NZ63 289 aaPredicted RBP10.57□□□□□ -0.72
FN1-227ENST00000498719 DBF4Q9UBU7 674 aaPredicted RBP10.57□□□□□ -0.72
FN1-227ENST00000498719 AIMP1Q12904 312 aaKnown RBP10.56□□□□□ -0.72
FN1-227ENST00000498719 CCDC96Q2M329 555 aa10.56□□□□□ -0.72
FN1-227ENST00000498719 C1orf141Q5JVX7 400 aa10.56□□□□□ -0.72
FN1-227ENST00000498719 C1orf131Q8NDD1 294 aaKnown RBP10.56□□□□□ -0.72
FN1-227ENST00000498719 DDX54Q8TDD1 881 aaKnown RBP10.56□□□□□ -0.72
FN1-227ENST00000498719 EPAS1Q99814 870 aa10.56□□□□□ -0.72
FN1-227ENST00000498719 CDHR5Q9HBB8 845 aa10.56□□□□□ -0.72
FN1-227ENST00000498719 RGPD5Q99666 1765 aa10.56□□□□□ -0.72
FN1-227ENST00000498719 AK2P54819 239 aa10.56□□□□□ -0.72
FN1-227ENST00000498719 PTH1RQ03431 593 aa10.56□□□□□ -0.72
FN1-227ENST00000498719 LRSAM1Q6UWE0 723 aa10.56□□□□□ -0.72
FN1-227ENST00000498719 ARHGEF25Q86VW2 580 aa10.56□□□□□ -0.72
FN1-227ENST00000498719 ANKRD24Q8TF21 1146 aa10.56□□□□□ -0.72
FN1-227ENST00000498719 NPDC1Q9NQX5 325 aaPredicted RBP10.56□□□□□ -0.72
FN1-227ENST00000498719 SYCP2LQ5T4T6 812 aa10.55□□□□□ -0.72
FN1-227ENST00000498719 RUFY3Q7L099 469 aa10.55□□□□□ -0.72
FN1-227ENST00000498719 MCF2L2Q86YR7 1114 aa10.55□□□□□ -0.72
FN1-227ENST00000498719 SPIRE2Q8WWL2 714 aa10.55□□□□□ -0.72
FN1-227ENST00000498719 CLP1Q92989 425 aaKnown RBP10.55□□□□□ -0.72
FN1-227ENST00000498719 C8orf48Q96LL4 319 aa10.55□□□□□ -0.72
FN1-227ENST00000498719 TTC14Q96N46 770 aa10.55□□□□□ -0.72
FN1-227ENST00000498719 NEUROD6Q96NK8 337 aa10.55□□□□□ -0.72
FN1-227ENST00000498719 PAGR1Q9BTK6 254 aa10.55□□□□□ -0.72
FN1-227ENST00000498719 LZTS3O60299 673 aaPredicted RBP10.55□□□□□ -0.72
FN1-227ENST00000498719 LARGE1O95461 756 aa10.55□□□□□ -0.72
FN1-227ENST00000498719 SLC39A6Q13433 755 aa10.55□□□□□ -0.72
FN1-227ENST00000498719 ADCK5Q3MIX3 580 aa10.55□□□□□ -0.72
FN1-227ENST00000498719 CLASRPQ8N2M8 674 aaKnown RBP10.55□□□□□ -0.72
FN1-227ENST00000498719 ADGRL3Q9HAR2 1447 aa10.55□□□□□ -0.72
FN1-227ENST00000498719 RPAP1Q9BWH6 1393 aaPredicted RBP10.55□□□□□ -0.72
FN1-227ENST00000498719 CD53P19397 219 aa10.54□□□□□ -0.72
FN1-227ENST00000498719 CASTP20810 708 aaKnown RBP10.54□□□□□ -0.72
FN1-227ENST00000498719 GNALP38405 381 aa10.54□□□□□ -0.72
FN1-227ENST00000498719 COL9A3Q14050 684 aaPredicted RBP10.54□□□□□ -0.72
FN1-227ENST00000498719 KSR2Q6VAB6 950 aa10.54□□□□□ -0.72
FN1-227ENST00000498719 KIAA1211Q6ZU35 1233 aa10.54□□□□□ -0.72
FN1-227ENST00000498719 USP48Q86UV5 1035 aa10.54□□□□□ -0.72
FN1-227ENST00000498719 EPS8L1Q8TE68 723 aa10.54□□□□□ -0.72
FN1-227ENST00000498719 RNF34Q969K3 372 aa10.54□□□□□ -0.72
FN1-227ENST00000498719 KAZALD1Q96I82 304 aa10.54□□□□□ -0.72
FN1-227ENST00000498719 ARPC5LQ9BPX5 153 aa10.54□□□□□ -0.72
FN1-227ENST00000498719 CRYBG1Q9Y4K1 1723 aa10.54□□□□□ -0.72
FN1-227ENST00000498719 ENPP3O14638 875 aa10.54□□□□□ -0.72
FN1-227ENST00000498719 GLRX3O76003 335 aaKnown RBP10.54□□□□□ -0.72
FN1-227ENST00000498719 XRCC5P13010 732 aaKnown RBP10.54□□□□□ -0.72
FN1-227ENST00000498719 MTX1Q13505 466 aa10.54□□□□□ -0.72
FN1-227ENST00000498719 AMOTQ4VCS5 1084 aa10.54□□□□□ -0.72
FN1-227ENST00000498719 ZSCAN30Q86W11 494 aa10.54□□□□□ -0.72
FN1-227ENST00000498719 WDR75Q8IWA0 830 aaKnown RBP10.54□□□□□ -0.72
FN1-227ENST00000498719 KLHDC4Q8TBB5 520 aa10.54□□□□□ -0.72
FN1-227ENST00000498719 SUCLG2Q96I99 432 aa10.54□□□□□ -0.72
FN1-227ENST00000498719 RNPC3Q96LT9 517 aaKnown RBP10.54□□□□□ -0.72
FN1-227ENST00000498719 SIL1Q9H173 461 aa10.54□□□□□ -0.72
FN1-227ENST00000498719 DIAPH3Q9NSV4 1193 aa10.54□□□□□ -0.72
FN1-227ENST00000498719 DHX16O60231 1041 aaKnown RBP10.53□□□□□ -0.72
FN1-227ENST00000498719 LILRB3O75022 631 aa10.53□□□□□ -0.72
FN1-227ENST00000498719 MBD3O95983 291 aa10.53□□□□□ -0.72
FN1-227ENST00000498719 PRPF40BQ6NWY9 871 aaKnown RBP10.53□□□□□ -0.72
FN1-227ENST00000498719 ARMCX6Q7L4S7 300 aa10.53□□□□□ -0.72
FN1-227ENST00000498719 AACSQ86V21 672 aa10.53□□□□□ -0.72
FN1-227ENST00000498719 CCDC8Q9H0W5 538 aaPredicted RBP10.53□□□□□ -0.72
FN1-227ENST00000498719 BICC1Q9H694 974 aaKnown RBP10.53□□□□□ -0.72
FN1-227ENST00000498719 TTC41PQ6P2S7 1318 aa10.53□□□□□ -0.72
FN1-227ENST00000498719 USP42Q9H9J4 1324 aaKnown RBP10.53□□□□□ -0.72
FN1-227ENST00000498719 PHRF1Q9P1Y6 1649 aaKnown RBP10.53□□□□□ -0.72
FN1-227ENST00000498719 SASH1O94885 1247 aa10.53□□□□□ -0.72
FN1-227ENST00000498719 VIL1P09327 827 aaKnown RBP10.53□□□□□ -0.72
FN1-227ENST00000498719 IFIT2P09913 472 aaKnown RBP10.53□□□□□ -0.72
FN1-227ENST00000498719 COPB2P35606 906 aa10.53□□□□□ -0.72
FN1-227ENST00000498719 PDLIM2Q96JY6 352 aa10.53□□□□□ -0.72
FN1-227ENST00000498719 ECHDC1Q9NTX5 307 aa10.53□□□□□ -0.72
FN1-227ENST00000498719 TLR7Q9NYK1 1049 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms