RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 MAP2K2P36507 400 aa10.65□□□□□ -0.7
HMGXB4-207ENST00000498212 CTCFP49711 727 aaPredicted RBP10.65□□□□□ -0.7
HMGXB4-207ENST00000498212 HUNKP57058 714 aa10.65□□□□□ -0.7
HMGXB4-207ENST00000498212 UBE4AQ14139 1066 aa10.65□□□□□ -0.7
HMGXB4-207ENST00000498212 DIEXFQ68CQ4 756 aaKnown RBP10.65□□□□□ -0.7
HMGXB4-207ENST00000498212 KIAA0825Q8IV33 1275 aa10.65□□□□□ -0.7
HMGXB4-207ENST00000498212 ANKRD44Q8N8A2 993 aa10.65□□□□□ -0.7
HMGXB4-207ENST00000498212 C2orf69Q8N8R5 385 aa10.65□□□□□ -0.7
HMGXB4-207ENST00000498212 CDCA5Q96FF9 252 aa10.65□□□□□ -0.7
HMGXB4-207ENST00000498212 HDAC9Q9UKV0 1011 aa10.65□□□□□ -0.7
HMGXB4-207ENST00000498212 NOB1Q9ULX3 412 aaKnown RBP10.65□□□□□ -0.7
HMGXB4-207ENST00000498212 MROH5Q6ZUA9 1318 aa10.64□□□□□ -0.71
HMGXB4-207ENST00000498212 WNT10BO00744 389 aa10.64□□□□□ -0.71
HMGXB4-207ENST00000498212 AOC2O75106 756 aa10.64□□□□□ -0.71
HMGXB4-207ENST00000498212 BRPF1P55201 1214 aaPredicted RBP10.64□□□□□ -0.71
HMGXB4-207ENST00000498212 NBPF9Q3BBW0 867 aa10.64□□□□□ -0.71
HMGXB4-207ENST00000498212 TNS4Q8IZW8 715 aa10.64□□□□□ -0.71
HMGXB4-207ENST00000498212 MIER1Q8N108 512 aa10.64□□□□□ -0.71
HMGXB4-207ENST00000498212 BEGAINQ9BUH8 593 aa10.64□□□□□ -0.71
HMGXB4-207ENST00000498212 API5Q9BZZ5 524 aaKnown RBP10.64□□□□□ -0.71
HMGXB4-207ENST00000498212 RIPOR2Q9Y4F9 1068 aa10.64□□□□□ -0.71
HMGXB4-207ENST00000498212 SASH1O94885 1247 aa10.63□□□□□ -0.71
HMGXB4-207ENST00000498212 RARSP54136 660 aaKnown RBP10.63□□□□□ -0.71
HMGXB4-207ENST00000498212 FKBP1AP62942 108 aaKnown RBP10.63□□□□□ -0.71
HMGXB4-207ENST00000498212 LRRC24Q50LG9 513 aa10.63□□□□□ -0.71
HMGXB4-207ENST00000498212 RGMBQ6NW40 437 aa10.63□□□□□ -0.71
HMGXB4-207ENST00000498212 CERS5Q8N5B7 392 aa10.63□□□□□ -0.71
HMGXB4-207ENST00000498212 PRDM10Q9NQV6 1147 aa10.63□□□□□ -0.71
HMGXB4-207ENST00000498212 SCAF8Q9UPN6 1271 aaKnown RBP10.63□□□□□ -0.71
HMGXB4-207ENST00000498212 KIF16BQ96L93 1317 aa10.62□□□□□ -0.71
HMGXB4-207ENST00000498212 UBTFL1P0CB47 393 aaPredicted RBP10.62□□□□□ -0.71
HMGXB4-207ENST00000498212 HSPA8P11142 646 aaKnown RBP10.62□□□□□ -0.71
HMGXB4-207ENST00000498212 HIBADHP31937 336 aaKnown RBP10.62□□□□□ -0.71
HMGXB4-207ENST00000498212 GYG1P46976 350 aa10.62□□□□□ -0.71
HMGXB4-207ENST00000498212 LBX1P52954 281 aa10.62□□□□□ -0.71
HMGXB4-207ENST00000498212 NOGQ13253 232 aa10.62□□□□□ -0.71
HMGXB4-207ENST00000498212 METTL24Q5JXM2 366 aa10.62□□□□□ -0.71
HMGXB4-207ENST00000498212 KLHDC4Q8TBB5 520 aa10.62□□□□□ -0.71
HMGXB4-207ENST00000498212 JAG2Q9Y219 1238 aa10.62□□□□□ -0.71
HMGXB4-207ENST00000498212 FAM205AQ6ZU69 1335 aa10.61□□□□□ -0.71
HMGXB4-207ENST00000498212 F8W031 263 aaPredicted RBP10.61□□□□□ -0.71
HMGXB4-207ENST00000498212 PDE8BO95263 885 aa10.61□□□□□ -0.71
HMGXB4-207ENST00000498212 ZNF157P51786 506 aaPredicted RBP10.61□□□□□ -0.71
HMGXB4-207ENST00000498212 FKBP1BP68106 108 aa10.61□□□□□ -0.71
HMGXB4-207ENST00000498212 DLGAP5Q15398 846 aa10.61□□□□□ -0.71
HMGXB4-207ENST00000498212 APOBEC3FQ8IUX4 373 aaKnown RBP10.61□□□□□ -0.71
HMGXB4-207ENST00000498212 VGLL2Q8N8G2 317 aa10.61□□□□□ -0.71
HMGXB4-207ENST00000498212 TDRD7Q8NHU6 1098 aaKnown RBP10.61□□□□□ -0.71
HMGXB4-207ENST00000498212 ARHGAP45Q92619 1136 aa10.61□□□□□ -0.71
HMGXB4-207ENST00000498212 CCDC102AQ96A19 550 aa10.61□□□□□ -0.71
HMGXB4-207ENST00000498212 ZBED3Q96IU2 234 aaPredicted RBP10.61□□□□□ -0.71
HMGXB4-207ENST00000498212 FAM84BQ96KN1 310 aaPredicted RBP10.61□□□□□ -0.71
HMGXB4-207ENST00000498212 HDAC5Q9UQL6 1122 aa10.61□□□□□ -0.71
HMGXB4-207ENST00000498212 CASP8AP2Q9UKL3 1982 aa10.61□□□□□ -0.71
HMGXB4-207ENST00000498212 COL1A1P02452 1464 aaPredicted RBP10.61□□□□□ -0.71
HMGXB4-207ENST00000498212 FAM155AB1AL88 458 aaPredicted RBP10.6□□□□□ -0.71
HMGXB4-207ENST00000498212 NF2P35240 595 aa10.6□□□□□ -0.71
HMGXB4-207ENST00000498212 RFX5P48382 616 aaPredicted RBP10.6□□□□□ -0.71
HMGXB4-207ENST00000498212 HNRNPUQ00839 825 aaKnown RBP eCLIP10.6□□□□□ -0.71
HMGXB4-207ENST00000498212 CFAP100Q494V2 611 aa10.6□□□□□ -0.71
HMGXB4-207ENST00000498212 CAVIN4Q5BKX8 364 aa10.6□□□□□ -0.71
HMGXB4-207ENST00000498212 MFSD14BQ5SR56 506 aa10.6□□□□□ -0.71
HMGXB4-207ENST00000498212 PRAMEF18Q5VWM3 479 aa10.6□□□□□ -0.71
HMGXB4-207ENST00000498212 VPS37DQ86XT2 251 aa10.6□□□□□ -0.71
HMGXB4-207ENST00000498212 MTMR14Q8NCE2 650 aa10.6□□□□□ -0.71
HMGXB4-207ENST00000498212 LAMB1P07942 1786 aa10.6□□□□□ -0.71
HMGXB4-207ENST00000498212 EYA2O00167 538 aa10.59□□□□□ -0.71
HMGXB4-207ENST00000498212 CA12O43570 354 aa10.59□□□□□ -0.71
HMGXB4-207ENST00000498212 MYO1BO43795 1136 aa10.59□□□□□ -0.71
HMGXB4-207ENST00000498212 SLC10A3P09131 477 aa10.59□□□□□ -0.71
HMGXB4-207ENST00000498212 FXR2P51116 673 aaKnown RBP eCLIP10.59□□□□□ -0.71
HMGXB4-207ENST00000498212 RBM5P52756 815 aaKnown RBP eCLIP10.59□□□□□ -0.71
HMGXB4-207ENST00000498212 PTPN12Q05209 780 aaKnown RBP10.59□□□□□ -0.71
HMGXB4-207ENST00000498212 PUM3Q15397 648 aaKnown RBP10.59□□□□□ -0.71
HMGXB4-207ENST00000498212 INTS3Q68E01 1043 aaKnown RBP10.59□□□□□ -0.71
HMGXB4-207ENST00000498212 FBXO33Q7Z6M2 555 aa10.59□□□□□ -0.71
HMGXB4-207ENST00000498212 ZIC5Q96T25 663 aa10.59□□□□□ -0.71
HMGXB4-207ENST00000498212 OTOFQ9HC10 1997 aa10.58□□□□□ -0.72
HMGXB4-207ENST00000498212 SPDYE2BA6NHP3 402 aa10.58□□□□□ -0.72
HMGXB4-207ENST00000498212 IPO8O15397 1037 aaKnown RBP10.58□□□□□ -0.72
HMGXB4-207ENST00000498212 FRAT2O75474 233 aaPredicted RBP10.58□□□□□ -0.72
HMGXB4-207ENST00000498212 IFIT1P09914 478 aaKnown RBP10.58□□□□□ -0.72
HMGXB4-207ENST00000498212 SPDYE6P0CI01 402 aa10.58□□□□□ -0.72
HMGXB4-207ENST00000498212 FGFR2P21802 821 aa10.58□□□□□ -0.72
HMGXB4-207ENST00000498212 TTLL12Q14166 644 aaPredicted RBP10.58□□□□□ -0.72
HMGXB4-207ENST00000498212 MOB2Q70IA6 237 aa10.58□□□□□ -0.72
HMGXB4-207ENST00000498212 FRAT1Q92837 279 aaPredicted RBP10.58□□□□□ -0.72
HMGXB4-207ENST00000498212 MEIS3Q99687 375 aa10.58□□□□□ -0.72
HMGXB4-207ENST00000498212 TSKSQ9UJT2 592 aa10.58□□□□□ -0.72
HMGXB4-207ENST00000498212 FBXO3Q9UK99 471 aa10.58□□□□□ -0.72
HMGXB4-207ENST00000498212 TTF2Q9UNY4 1162 aaKnown RBP10.58□□□□□ -0.72
HMGXB4-207ENST00000498212 IQSEC3Q9UPP2 1182 aaPredicted RBP10.58□□□□□ -0.72
HMGXB4-207ENST00000498212 PCDHAC2Q9Y5I4 1007 aa10.58□□□□□ -0.72
HMGXB4-207ENST00000498212 LRRFIP2Q9Y608 721 aaKnown RBP10.58□□□□□ -0.72
HMGXB4-207ENST00000498212 CLRN2A0PK11 232 aa10.57□□□□□ -0.72
HMGXB4-207ENST00000498212 UBE2Q2LH0YL09 131 aa10.57□□□□□ -0.72
HMGXB4-207ENST00000498212 BCAR3O75815 825 aa10.57□□□□□ -0.72
HMGXB4-207ENST00000498212 CIAO1O76071 339 aa10.57□□□□□ -0.72
HMGXB4-207ENST00000498212 GNAI3P08754 354 aa10.57□□□□□ -0.72
HMGXB4-207ENST00000498212 SLC5A1P13866 664 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms