RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 UBE2Q2LH0YL09 131 aa28.49■■■□□ 2.15
CDKN2A-208ENST00000498124 PUS3Q9BZE2 481 aaKnown RBP28.49■■■□□ 2.15
CDKN2A-208ENST00000498124 RNF186Q9NXI6 227 aa28.49■■■□□ 2.15
CDKN2A-208ENST00000498124 PCDHAC2Q9Y5I4 1007 aa28.49■■■□□ 2.15
CDKN2A-208ENST00000498124 PLIN1O60240 522 aa28.48■■■□□ 2.15
CDKN2A-208ENST00000498124 APOBEC3FQ8IUX4 373 aaKnown RBP28.48■■■□□ 2.15
CDKN2A-208ENST00000498124 SSH1Q8WYL5 1049 aa28.48■■■□□ 2.15
CDKN2A-208ENST00000498124 MCOLN1Q9GZU1 580 aa28.48■■■□□ 2.15
CDKN2A-208ENST00000498124 FKBP1AP62942 108 aaKnown RBP28.47■■■□□ 2.15
CDKN2A-208ENST00000498124 SLFN5Q08AF3 891 aa28.47■■■□□ 2.15
CDKN2A-208ENST00000498124 RABL6Q3YEC7 729 aaPredicted RBP28.47■■■□□ 2.15
CDKN2A-208ENST00000498124 ANKRD44Q8N8A2 993 aa28.47■■■□□ 2.15
CDKN2A-208ENST00000498124 MTMR14Q8NCE2 650 aa28.47■■■□□ 2.15
CDKN2A-208ENST00000498124 JAG2Q9Y219 1238 aa28.47■■■□□ 2.15
CDKN2A-208ENST00000498124 COL1A1P02452 1464 aaPredicted RBP28.46■■■□□ 2.15
CDKN2A-208ENST00000498124 ARAP2Q8WZ64 1704 aa28.46■■■□□ 2.15
CDKN2A-208ENST00000498124 PTPRCP08575 1304 aa28.46■■■□□ 2.15
CDKN2A-208ENST00000498124 AOX1Q06278 1338 aa28.46■■■□□ 2.15
CDKN2A-208ENST00000498124 BICC1Q9H694 974 aaKnown RBP28.46■■■□□ 2.15
CDKN2A-208ENST00000498124 SSC5DA1L4H1 1573 aa28.45■■■□□ 2.15
CDKN2A-208ENST00000498124 TRPA1O75762 1119 aa28.45■■■□□ 2.14
CDKN2A-208ENST00000498124 RIPOR2Q9Y4F9 1068 aa28.45■■■□□ 2.14
CDKN2A-208ENST00000498124 UBE4AQ14139 1066 aa28.44■■■□□ 2.14
CDKN2A-208ENST00000498124 DLGAP5Q15398 846 aa28.44■■■□□ 2.14
CDKN2A-208ENST00000498124 FAM205AQ6ZU69 1335 aa28.43■■■□□ 2.14
CDKN2A-208ENST00000498124 F8W031 263 aaPredicted RBP28.43■■■□□ 2.14
CDKN2A-208ENST00000498124 SPDYE2BA6NHP3 402 aa28.42■■■□□ 2.14
CDKN2A-208ENST00000498124 SPDYE6P0CI01 402 aa28.42■■■□□ 2.14
CDKN2A-208ENST00000498124 NF2P35240 595 aa28.42■■■□□ 2.14
CDKN2A-208ENST00000498124 GYG1P46976 350 aa28.42■■■□□ 2.14
CDKN2A-208ENST00000498124 TTLL12Q14166 644 aaPredicted RBP28.42■■■□□ 2.14
CDKN2A-208ENST00000498124 CFAP100Q494V2 611 aa28.42■■■□□ 2.14
CDKN2A-208ENST00000498124 REM2Q8IYK8 340 aaPredicted RBP28.42■■■□□ 2.14
CDKN2A-208ENST00000498124 TDRD7Q8NHU6 1098 aaKnown RBP28.42■■■□□ 2.14
CDKN2A-208ENST00000498124 CDCA7LQ96GN5 454 aa28.42■■■□□ 2.14
CDKN2A-208ENST00000498124 DGKZQ13574 1117 aa28.41■■■□□ 2.14
CDKN2A-208ENST00000498124 FAM84BQ96KN1 310 aaPredicted RBP28.41■■■□□ 2.14
CDKN2A-208ENST00000498124 DEFB129Q9H1M3 183 aa28.41■■■□□ 2.14
CDKN2A-208ENST00000498124 PTPN12Q05209 780 aaKnown RBP28.4■■■□□ 2.14
CDKN2A-208ENST00000498124 PRMT6Q96LA8 375 aaPredicted RBP28.4■■■□□ 2.14
CDKN2A-208ENST00000498124 USP44Q9H0E7 712 aa28.4■■■□□ 2.14
CDKN2A-208ENST00000498124 FZD1Q9UP38 647 aa28.4■■■□□ 2.14
CDKN2A-208ENST00000498124 MROH5Q6ZUA9 1318 aa28.4■■■□□ 2.14
CDKN2A-208ENST00000498124 CCDC85CA6NKD9 419 aa28.39■■■□□ 2.14
CDKN2A-208ENST00000498124 LRRC24Q50LG9 513 aa28.39■■■□□ 2.14
CDKN2A-208ENST00000498124 LDLRAD1Q5T700 205 aa28.39■■■□□ 2.14
CDKN2A-208ENST00000498124 TRMT2AQ8IZ69 625 aaKnown RBP28.39■■■□□ 2.14
CDKN2A-208ENST00000498124 CLRN2A0PK11 232 aa28.38■■■□□ 2.13
CDKN2A-208ENST00000498124 HIBADHP31937 336 aaKnown RBP28.38■■■□□ 2.13
CDKN2A-208ENST00000498124 PRKG1Q13976 671 aa28.38■■■□□ 2.13
CDKN2A-208ENST00000498124 VGLL2Q8N8G2 317 aa28.38■■■□□ 2.13
CDKN2A-208ENST00000498124 ZBED9Q6R2W3 1325 aa28.37■■■□□ 2.13
CDKN2A-208ENST00000498124 ALDH1L2Q3SY69 923 aa28.36■■■□□ 2.13
CDKN2A-208ENST00000498124 MFSD14BQ5SR56 506 aa28.36■■■□□ 2.13
CDKN2A-208ENST00000498124 ARMC9Q7Z3E5 817 aa28.36■■■□□ 2.13
CDKN2A-208ENST00000498124 KLHDC4Q8TBB5 520 aa28.36■■■□□ 2.13
CDKN2A-208ENST00000498124 PPP2R3BQ9Y5P8 575 aa28.36■■■□□ 2.13
CDKN2A-208ENST00000498124 MKRN3Q13064 507 aaKnown RBP28.35■■■□□ 2.13
CDKN2A-208ENST00000498124 FBXO33Q7Z6M2 555 aa28.35■■■□□ 2.13
CDKN2A-208ENST00000498124 ANGEL1Q9UNK9 670 aaKnown RBP28.35■■■□□ 2.13
CDKN2A-208ENST00000498124 LAMB1P07942 1786 aa28.34■■■□□ 2.13
CDKN2A-208ENST00000498124 TM4SF4P48230 202 aa28.34■■■□□ 2.13
CDKN2A-208ENST00000498124 MAP3K11Q16584 847 aa28.34■■■□□ 2.13
CDKN2A-208ENST00000498124 GRIK5Q16478 980 aa28.33■■■□□ 2.13
CDKN2A-208ENST00000498124 METTL24Q5JXM2 366 aa28.33■■■□□ 2.13
CDKN2A-208ENST00000498124 VEZTQ9HBM0 779 aa28.33■■■□□ 2.13
CDKN2A-208ENST00000498124 MYO1BO43795 1136 aa28.32■■■□□ 2.12
CDKN2A-208ENST00000498124 RFX5P48382 616 aaPredicted RBP28.32■■■□□ 2.12
CDKN2A-208ENST00000498124 SMC4Q9NTJ3 1288 aa28.32■■■□□ 2.12
CDKN2A-208ENST00000498124 SERPINA10Q9UK55 444 aa28.32■■■□□ 2.12
CDKN2A-208ENST00000498124 TTF2Q9UNY4 1162 aaKnown RBP28.32■■■□□ 2.12
CDKN2A-208ENST00000498124 PDE8BO95263 885 aa28.31■■■□□ 2.12
CDKN2A-208ENST00000498124 RGS19P49795 217 aa28.31■■■□□ 2.12
CDKN2A-208ENST00000498124 SPDYE2Q495Y8 402 aa28.31■■■□□ 2.12
CDKN2A-208ENST00000498124 SPRYD7Q5W111 196 aa28.31■■■□□ 2.12
CDKN2A-208ENST00000498124 IQSEC3Q9UPP2 1182 aaPredicted RBP28.31■■■□□ 2.12
CDKN2A-208ENST00000498124 OTOFQ9HC10 1997 aa28.3■■■□□ 2.12
CDKN2A-208ENST00000498124 RBM5P52756 815 aaKnown RBP eCLIP28.3■■■□□ 2.12
CDKN2A-208ENST00000498124 NBPF12Q5TAG4 269 aaPredicted RBP28.3■■■□□ 2.12
CDKN2A-208ENST00000498124 CLMNQ96JQ2 1002 aa28.3■■■□□ 2.12
CDKN2A-208ENST00000498124 TBC1D8O95759 1140 aa28.29■■■□□ 2.12
CDKN2A-208ENST00000498124 RASA3Q14644 834 aa28.29■■■□□ 2.12
CDKN2A-208ENST00000498124 FGFR2P21802 821 aa28.28■■■□□ 2.12
CDKN2A-208ENST00000498124 ZNF70Q9UC06 446 aaPredicted RBP28.28■■■□□ 2.12
CDKN2A-208ENST00000498124 CRKP46108 304 aa28.27■■■□□ 2.12
CDKN2A-208ENST00000498124 SREBF2Q12772 1141 aa28.27■■■□□ 2.12
CDKN2A-208ENST00000498124 CTU1Q7Z7A3 348 aaKnown RBP28.27■■■□□ 2.12
CDKN2A-208ENST00000498124 CDAN1Q8IWY9 1227 aa28.27■■■□□ 2.12
CDKN2A-208ENST00000498124 DZIP1LQ8IYY4 767 aaKnown RBP28.27■■■□□ 2.12
CDKN2A-208ENST00000498124 TDRD3Q9H7E2 651 aaKnown RBP28.27■■■□□ 2.12
CDKN2A-208ENST00000498124 TNRC18O15417 2968 aaPredicted RBP28.27■■■□□ 2.12
CDKN2A-208ENST00000498124 KIF16BQ96L93 1317 aa28.26■■■□□ 2.11
CDKN2A-208ENST00000498124 CHAF1AQ13111 956 aaPredicted RBP28.26■■■□□ 2.11
CDKN2A-208ENST00000498124 SUPT20HL1Q3ZLR7 823 aa28.26■■■□□ 2.11
CDKN2A-208ENST00000498124 VPS37DQ86XT2 251 aa28.26■■■□□ 2.11
CDKN2A-208ENST00000498124 ZNF296Q8WUU4 475 aaPredicted RBP28.26■■■□□ 2.11
CDKN2A-208ENST00000498124 CFHR5Q9BXR6 569 aa28.26■■■□□ 2.11
CDKN2A-208ENST00000498124 PPP1R12BO60237 982 aaPredicted RBP28.25■■■□□ 2.11
CDKN2A-208ENST00000498124 CT47B1P0C2W7 299 aaPredicted RBP28.25■■■□□ 2.11
CDKN2A-208ENST00000498124 BCAMP50895 628 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms