RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 DENND2AQ9ULE3 1009 aa19.64■□□□□ 0.73
SSBP1-214ENST00000498107 H7C1D1 291 aa19.63■□□□□ 0.73
SSBP1-214ENST00000498107 NEFLP07196 543 aa19.63■□□□□ 0.73
SSBP1-214ENST00000498107 UQCRFS1P1P0C7P4 283 aa19.63■□□□□ 0.73
SSBP1-214ENST00000498107 SCNN1DP51172 638 aa19.63■□□□□ 0.73
SSBP1-214ENST00000498107 AACSQ86V21 672 aa19.63■□□□□ 0.73
SSBP1-214ENST00000498107 C16orf71Q8IYS4 520 aaPredicted RBP19.63■□□□□ 0.73
SSBP1-214ENST00000498107 GCC1Q96CN9 775 aa19.63■□□□□ 0.73
SSBP1-214ENST00000498107 ZBTB47Q9UFB7 747 aaPredicted RBP19.63■□□□□ 0.73
SSBP1-214ENST00000498107 ZBTB12Q9Y330 459 aaPredicted RBP19.63■□□□□ 0.73
SSBP1-214ENST00000498107 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.63■□□□□ 0.73
SSBP1-214ENST00000498107 PHKA1P46020 1223 aa19.62■□□□□ 0.73
SSBP1-214ENST00000498107 PNMA8AQ86V59 439 aaPredicted RBP19.62■□□□□ 0.73
SSBP1-214ENST00000498107 OGFOD1Q8N543 542 aa19.62■□□□□ 0.73
SSBP1-214ENST00000498107 WDR66Q8TBY9 1149 aa19.62■□□□□ 0.73
SSBP1-214ENST00000498107 EAF2Q96CJ1 260 aaPredicted RBP19.62■□□□□ 0.73
SSBP1-214ENST00000498107 IL1RAPL2Q9NP60 686 aa19.62■□□□□ 0.73
SSBP1-214ENST00000498107 CNOT7Q9UIV1 285 aaKnown RBP19.62■□□□□ 0.73
SSBP1-214ENST00000498107 IQSEC3Q9UPP2 1182 aaPredicted RBP19.62■□□□□ 0.73
SSBP1-214ENST00000498107 MYH13Q9UKX3 1938 aa19.62■□□□□ 0.73
SSBP1-214ENST00000498107 POTECB2RU33 542 aa19.61■□□□□ 0.73
SSBP1-214ENST00000498107 IFIT2P09913 472 aaKnown RBP19.61■□□□□ 0.73
SSBP1-214ENST00000498107 EPHX2P34913 555 aa19.61■□□□□ 0.73
SSBP1-214ENST00000498107 DBNDD2Q9BQY9 259 aa19.61■□□□□ 0.73
SSBP1-214ENST00000498107 TAF1DQ9H5J8 278 aaPredicted RBP19.61■□□□□ 0.73
SSBP1-214ENST00000498107 ADARB2Q9NS39 739 aaKnown RBP19.61■□□□□ 0.73
SSBP1-214ENST00000498107 HDAC9Q9UKV0 1011 aa19.61■□□□□ 0.73
SSBP1-214ENST00000498107 PDS5AQ29RF7 1337 aaKnown RBP19.6■□□□□ 0.73
SSBP1-214ENST00000498107 USP17L8P0C7I0 530 aa19.6■□□□□ 0.73
SSBP1-214ENST00000498107 CHAF1AQ13111 956 aaPredicted RBP19.6■□□□□ 0.73
SSBP1-214ENST00000498107 MFSD14BQ5SR56 506 aa19.6■□□□□ 0.73
SSBP1-214ENST00000498107 TTC39AQ5SRH9 613 aa19.6■□□□□ 0.73
SSBP1-214ENST00000498107 MICALL2Q8IY33 904 aa19.6■□□□□ 0.73
SSBP1-214ENST00000498107 ZNF512BQ96KM6 892 aaPredicted RBP19.6■□□□□ 0.73
SSBP1-214ENST00000498107 GMLQ99445 158 aa19.6■□□□□ 0.73
SSBP1-214ENST00000498107 CCDC8Q9H0W5 538 aaPredicted RBP19.6■□□□□ 0.73
SSBP1-214ENST00000498107 KIF3CO14782 793 aa19.59■□□□□ 0.73
SSBP1-214ENST00000498107 ARID4AP29374 1257 aaPredicted RBP19.59■□□□□ 0.73
SSBP1-214ENST00000498107 EPS15P42566 896 aa19.59■□□□□ 0.73
SSBP1-214ENST00000498107 USP50Q70EL3 339 aaPredicted RBP19.59■□□□□ 0.73
SSBP1-214ENST00000498107 ZGPATQ8N5A5 531 aaKnown RBP19.59■□□□□ 0.73
SSBP1-214ENST00000498107 DBNLQ9UJU6 430 aaKnown RBP19.59■□□□□ 0.73
SSBP1-214ENST00000498107 SUGT1Q9Y2Z0 365 aa19.59■□□□□ 0.73
SSBP1-214ENST00000498107 ZNF646O15015 1829 aaPredicted RBP19.58■□□□□ 0.73
SSBP1-214ENST00000498107 JAG2Q9Y219 1238 aa19.58■□□□□ 0.72
SSBP1-214ENST00000498107 ZNF280AP59817 542 aaPredicted RBP19.57■□□□□ 0.72
SSBP1-214ENST00000498107 RASGRF1Q13972 1273 aa19.57■□□□□ 0.72
SSBP1-214ENST00000498107 MXD3Q9BW11 206 aa19.57■□□□□ 0.72
SSBP1-214ENST00000498107 MAST3O60307 1309 aa19.56■□□□□ 0.72
SSBP1-214ENST00000498107 SALL1Q9NSC2 1324 aa19.56■□□□□ 0.72
SSBP1-214ENST00000498107 TOMM70O94826 608 aa19.56■□□□□ 0.72
SSBP1-214ENST00000498107 C1QTNF8P60827 252 aa19.56■□□□□ 0.72
SSBP1-214ENST00000498107 EAPPQ56P03 285 aaPredicted RBP19.56■□□□□ 0.72
SSBP1-214ENST00000498107 KIAA0825Q8IV33 1275 aa19.56■□□□□ 0.72
SSBP1-214ENST00000498107 CERS5Q8N5B7 392 aa19.56■□□□□ 0.72
SSBP1-214ENST00000498107 SPATA5Q8NB90 893 aa19.56■□□□□ 0.72
SSBP1-214ENST00000498107 SPTY2D1Q68D10 685 aaPredicted RBP19.55■□□□□ 0.72
SSBP1-214ENST00000498107 LDHDQ86WU2 507 aa19.55■□□□□ 0.72
SSBP1-214ENST00000498107 GPATCH3Q96I76 525 aa19.55■□□□□ 0.72
SSBP1-214ENST00000498107 BCL11AQ9H165 835 aa19.55■□□□□ 0.72
SSBP1-214ENST00000498107 TLR7Q9NYK1 1049 aaKnown RBP19.55■□□□□ 0.72
SSBP1-214ENST00000498107 SMARCA5O60264 1052 aaPredicted RBP19.54■□□□□ 0.72
SSBP1-214ENST00000498107 ANKRD45Q5TZF3 282 aa19.54■□□□□ 0.72
SSBP1-214ENST00000498107 SMC5Q8IY18 1101 aa19.54■□□□□ 0.72
SSBP1-214ENST00000498107 RBM46Q8TBY0 533 aaKnown RBP19.54■□□□□ 0.72
SSBP1-214ENST00000498107 ZC3H15Q8WU90 426 aaKnown RBP19.54■□□□□ 0.72
SSBP1-214ENST00000498107 MYOZ2Q9NPC6 264 aa19.54■□□□□ 0.72
SSBP1-214ENST00000498107 HMG20BQ9P0W2 317 aa19.54■□□□□ 0.72
SSBP1-214ENST00000498107 TTF2Q9UNY4 1162 aaKnown RBP19.54■□□□□ 0.72
SSBP1-214ENST00000498107 CLEC11AQ9Y240 323 aa19.54■□□□□ 0.72
SSBP1-214ENST00000498107 F8W031 263 aaPredicted RBP19.53■□□□□ 0.72
SSBP1-214ENST00000498107 IGSF3O75054 1194 aa19.53■□□□□ 0.72
SSBP1-214ENST00000498107 IGHDP01880 384 aa19.53■□□□□ 0.72
SSBP1-214ENST00000498107 MCAMP43121 646 aa19.53■□□□□ 0.72
SSBP1-214ENST00000498107 HDLBPQ00341 1268 aaKnown RBP19.53■□□□□ 0.72
SSBP1-214ENST00000498107 KIF4BQ2VIQ3 1234 aa19.53■□□□□ 0.72
SSBP1-214ENST00000498107 SAMD7Q7Z3H4 446 aa19.53■□□□□ 0.72
SSBP1-214ENST00000498107 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.53■□□□□ 0.72
SSBP1-214ENST00000498107 COL1A1P02452 1464 aaPredicted RBP19.53■□□□□ 0.72
SSBP1-214ENST00000498107 SHTN1A0MZ66 631 aa19.52■□□□□ 0.72
SSBP1-214ENST00000498107 LDHBP07195 334 aaKnown RBP19.52■□□□□ 0.72
SSBP1-214ENST00000498107 TBC1D10BQ4KMP7 808 aaPredicted RBP19.52■□□□□ 0.72
SSBP1-214ENST00000498107 RBM26Q5T8P6 1007 aaKnown RBP19.52■□□□□ 0.72
SSBP1-214ENST00000498107 SMC1BQ8NDV3 1235 aa19.52■□□□□ 0.72
SSBP1-214ENST00000498107 MRIQ9BWK5 157 aa19.52■□□□□ 0.72
SSBP1-214ENST00000498107 SERPINA10Q9UK55 444 aa19.52■□□□□ 0.72
SSBP1-214ENST00000498107 DLGAP5Q15398 846 aa19.51■□□□□ 0.71
SSBP1-214ENST00000498107 CHADLQ6NUI6 762 aa19.51■□□□□ 0.71
SSBP1-214ENST00000498107 SLF2Q8IX21 1173 aa19.51■□□□□ 0.71
SSBP1-214ENST00000498107 MTMR14Q8NCE2 650 aa19.51■□□□□ 0.71
SSBP1-214ENST00000498107 TRPM4Q8TD43 1214 aa19.51■□□□□ 0.71
SSBP1-214ENST00000498107 ABCF2Q9UG63 623 aa19.51■□□□□ 0.71
SSBP1-214ENST00000498107 FSTL1Q12841 308 aa19.5■□□□□ 0.71
SSBP1-214ENST00000498107 ERICH6Q7L0X2 663 aa19.5■□□□□ 0.71
SSBP1-214ENST00000498107 ECHDC1Q9NTX5 307 aa19.5■□□□□ 0.71
SSBP1-214ENST00000498107 AKAP11Q9UKA4 1901 aa19.49■□□□□ 0.71
SSBP1-214ENST00000498107 MYO1BO43795 1136 aa19.49■□□□□ 0.71
SSBP1-214ENST00000498107 ATP5JP18859 108 aa19.49■□□□□ 0.71
SSBP1-214ENST00000498107 RBM5P52756 815 aaKnown RBP eCLIP19.49■□□□□ 0.71
SSBP1-214ENST00000498107 SCARF1Q14162 830 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms