RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 EDC3Q96F86 508 aaKnown RBP9.35□□□□□ -0.91
HLA-DMB-262ENST00000498020 IRS4O14654 1257 aaPredicted RBP9.34□□□□□ -0.91
HLA-DMB-262ENST00000498020 SLC3A2P08195 630 aaKnown RBP9.34□□□□□ -0.91
HLA-DMB-262ENST00000498020 POTEAQ6S8J7 498 aa9.34□□□□□ -0.91
HLA-DMB-262ENST00000498020 VSIG10Q8N0Z9 540 aa9.34□□□□□ -0.91
HLA-DMB-262ENST00000498020 ANKRD20A12PQ8NF67 263 aa9.34□□□□□ -0.91
HLA-DMB-262ENST00000498020 CNKSR1Q969H4 720 aa9.34□□□□□ -0.91
HLA-DMB-262ENST00000498020 ZNF594Q96JF6 807 aaPredicted RBP9.34□□□□□ -0.91
HLA-DMB-262ENST00000498020 CNPY2Q9Y2B0 182 aa9.34□□□□□ -0.91
HLA-DMB-262ENST00000498020 CIAO1O76071 339 aa9.34□□□□□ -0.91
HLA-DMB-262ENST00000498020 PICALMQ13492 652 aa9.34□□□□□ -0.91
HLA-DMB-262ENST00000498020 NECTIN1Q15223 517 aa9.34□□□□□ -0.91
HLA-DMB-262ENST00000498020 Q6ZUG5 572 aa9.34□□□□□ -0.91
HLA-DMB-262ENST00000498020 DHX32Q7L7V1 743 aaKnown RBP9.34□□□□□ -0.91
HLA-DMB-262ENST00000498020 NACAP1Q9BZK3 213 aa9.34□□□□□ -0.91
HLA-DMB-262ENST00000498020 NUP62CLQ9H1M0 184 aa9.34□□□□□ -0.91
HLA-DMB-262ENST00000498020 PIM2Q9P1W9 311 aa9.34□□□□□ -0.91
HLA-DMB-262ENST00000498020 RGPD1P0DJD0 1748 aa9.34□□□□□ -0.91
HLA-DMB-262ENST00000498020 SLIT3O75094 1523 aa9.34□□□□□ -0.91
HLA-DMB-262ENST00000498020 ZNF213O14771 459 aa9.34□□□□□ -0.91
HLA-DMB-262ENST00000498020 CYP2E1P05181 493 aaPredicted RBP9.34□□□□□ -0.91
HLA-DMB-262ENST00000498020 TICAM2Q86XR7 235 aa9.34□□□□□ -0.91
HLA-DMB-262ENST00000498020 SOS2Q07890 1332 aaPredicted RBP9.34□□□□□ -0.91
HLA-DMB-262ENST00000498020 RGPD8O14715 1765 aaPredicted RBP9.34□□□□□ -0.91
HLA-DMB-262ENST00000498020 TAF5LO75529 589 aa9.34□□□□□ -0.91
HLA-DMB-262ENST00000498020 NWD1Q149M9 1564 aa9.33□□□□□ -0.92
HLA-DMB-262ENST00000498020 SART3Q15020 963 aaKnown RBP9.33□□□□□ -0.92
HLA-DMB-262ENST00000498020 ZSCAN30Q86W11 494 aa9.33□□□□□ -0.92
HLA-DMB-262ENST00000498020 ZBTB38Q8NAP3 1195 aaPredicted RBP9.33□□□□□ -0.92
HLA-DMB-262ENST00000498020 ZSCAN16Q9H4T2 348 aaPredicted RBP9.33□□□□□ -0.92
HLA-DMB-262ENST00000498020 KIF1AQ12756 1690 aa9.33□□□□□ -0.92
HLA-DMB-262ENST00000498020 MEGF6O75095 1541 aa9.33□□□□□ -0.92
HLA-DMB-262ENST00000498020 KDM6AO15550 1401 aaPredicted RBP9.33□□□□□ -0.92
HLA-DMB-262ENST00000498020 C21orf2O43822 256 aa9.33□□□□□ -0.92
HLA-DMB-262ENST00000498020 ALDH1B1P30837 517 aa9.33□□□□□ -0.92
HLA-DMB-262ENST00000498020 MAP3K12Q12852 859 aa9.33□□□□□ -0.92
HLA-DMB-262ENST00000498020 ADCK5Q3MIX3 580 aa9.33□□□□□ -0.92
HLA-DMB-262ENST00000498020 DCPSQ96C86 337 aaKnown RBP9.33□□□□□ -0.92
HLA-DMB-262ENST00000498020 ARID3AQ99856 593 aa9.33□□□□□ -0.92
HLA-DMB-262ENST00000498020 DSCC1Q9BVC3 393 aa9.33□□□□□ -0.92
HLA-DMB-262ENST00000498020 TNMDQ9H2S6 317 aa9.33□□□□□ -0.92
HLA-DMB-262ENST00000498020 HOOK1Q9UJC3 728 aaKnown RBP9.33□□□□□ -0.92
HLA-DMB-262ENST00000498020 NBPF26B4DH59 902 aa9.33□□□□□ -0.92
HLA-DMB-262ENST00000498020 NBPF10Q6P3W6 841 aaKnown RBP9.33□□□□□ -0.92
HLA-DMB-262ENST00000498020 CCDC129Q6ZRS4 1044 aa9.33□□□□□ -0.92
HLA-DMB-262ENST00000498020 TRMT1LQ7Z2T5 733 aaKnown RBP9.33□□□□□ -0.92
HLA-DMB-262ENST00000498020 NBPF15Q8N660 670 aa9.33□□□□□ -0.92
HLA-DMB-262ENST00000498020 CHD2O14647 1828 aaKnown RBP9.33□□□□□ -0.92
HLA-DMB-262ENST00000498020 VIRMAQ69YN4 1812 aaKnown RBP9.33□□□□□ -0.92
HLA-DMB-262ENST00000498020 DNM1Q05193 864 aaKnown RBP9.32□□□□□ -0.92
HLA-DMB-262ENST00000498020 PLS1Q14651 629 aa9.32□□□□□ -0.92
HLA-DMB-262ENST00000498020 NKX1-1Q15270 411 aaPredicted RBP9.32□□□□□ -0.92
HLA-DMB-262ENST00000498020 ME3Q16798 604 aa9.32□□□□□ -0.92
HLA-DMB-262ENST00000498020 GIGYF2Q6Y7W6 1299 aaKnown RBP9.32□□□□□ -0.92
HLA-DMB-262ENST00000498020 XAGE2Q96GT9 111 aa9.32□□□□□ -0.92
HLA-DMB-262ENST00000498020 KAZALD1Q96I82 304 aa9.32□□□□□ -0.92
HLA-DMB-262ENST00000498020 MAP3K15Q6ZN16 1313 aa9.32□□□□□ -0.92
HLA-DMB-262ENST00000498020 MINDY4BA8MYZ0 360 aa9.32□□□□□ -0.92
HLA-DMB-262ENST00000498020 PDE8AO60658 829 aa9.32□□□□□ -0.92
HLA-DMB-262ENST00000498020 CDKL5O76039 1030 aa9.32□□□□□ -0.92
HLA-DMB-262ENST00000498020 TDO2P48775 406 aa9.32□□□□□ -0.92
HLA-DMB-262ENST00000498020 MAP3K11Q16584 847 aa9.32□□□□□ -0.92
HLA-DMB-262ENST00000498020 UVSSAQ2YD98 709 aa9.32□□□□□ -0.92
HLA-DMB-262ENST00000498020 SMIM5Q71RC9 77 aa9.32□□□□□ -0.92
HLA-DMB-262ENST00000498020 CCDC125Q86Z20 511 aa9.32□□□□□ -0.92
HLA-DMB-262ENST00000498020 MPNDQ8N594 471 aa9.32□□□□□ -0.92
HLA-DMB-262ENST00000498020 PIBF1Q8WXW3 757 aa9.32□□□□□ -0.92
HLA-DMB-262ENST00000498020 NDUFB9Q9Y6M9 179 aa9.32□□□□□ -0.92
HLA-DMB-262ENST00000498020 KINO60870 393 aaKnown RBP9.32□□□□□ -0.92
HLA-DMB-262ENST00000498020 SERPINB2P05120 415 aa9.32□□□□□ -0.92
HLA-DMB-262ENST00000498020 ITGA6P23229 1130 aa9.32□□□□□ -0.92
HLA-DMB-262ENST00000498020 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.32□□□□□ -0.92
HLA-DMB-262ENST00000498020 NCOA7Q8NI08 942 aa9.32□□□□□ -0.92
HLA-DMB-262ENST00000498020 TTC14Q96N46 770 aa9.32□□□□□ -0.92
HLA-DMB-262ENST00000498020 MCM5P33992 734 aa9.32□□□□□ -0.92
HLA-DMB-262ENST00000498020 SAFBQ15424 915 aaKnown RBP eCLIP9.32□□□□□ -0.92
HLA-DMB-262ENST00000498020 LRRC24Q50LG9 513 aa9.32□□□□□ -0.92
HLA-DMB-262ENST00000498020 MKNK2Q9HBH9 465 aa9.32□□□□□ -0.92
HLA-DMB-262ENST00000498020 CABP5Q9NP86 173 aa9.32□□□□□ -0.92
HLA-DMB-262ENST00000498020 DDX19AQ9NUU7 478 aaKnown RBP9.32□□□□□ -0.92
HLA-DMB-262ENST00000498020 CCDC70Q6NSX1 233 aa9.31□□□□□ -0.92
HLA-DMB-262ENST00000498020 EP400NLQ6ZTU2 488 aa9.31□□□□□ -0.92
HLA-DMB-262ENST00000498020 GAS2L3Q86XJ1 694 aa9.31□□□□□ -0.92
HLA-DMB-262ENST00000498020 TTLL6Q8N841 843 aa9.31□□□□□ -0.92
HLA-DMB-262ENST00000498020 PIGBQ92521 554 aa9.31□□□□□ -0.92
HLA-DMB-262ENST00000498020 LRRC2Q9BYS8 371 aa9.31□□□□□ -0.92
HLA-DMB-262ENST00000498020 SRP68Q9UHB9 627 aaKnown RBP9.31□□□□□ -0.92
HLA-DMB-262ENST00000498020 CA8P35219 290 aa9.31□□□□□ -0.92
HLA-DMB-262ENST00000498020 TNNT3P45378 269 aaPredicted RBP9.31□□□□□ -0.92
HLA-DMB-262ENST00000498020 CCT2P78371 535 aaKnown RBP9.31□□□□□ -0.92
HLA-DMB-262ENST00000498020 CEBPZQ03701 1054 aaKnown RBP9.31□□□□□ -0.92
HLA-DMB-262ENST00000498020 STK38Q15208 465 aa9.31□□□□□ -0.92
HLA-DMB-262ENST00000498020 VPS72Q15906 364 aa9.31□□□□□ -0.92
HLA-DMB-262ENST00000498020 APPBP2Q92624 585 aa9.31□□□□□ -0.92
HLA-DMB-262ENST00000498020 TFIP11Q9UBB9 837 aaKnown RBP9.31□□□□□ -0.92
HLA-DMB-262ENST00000498020 R3HCC1Q9Y3T6 440 aaKnown RBP9.31□□□□□ -0.92
HLA-DMB-262ENST00000498020 RFX7Q2KHR2 1363 aa9.31□□□□□ -0.92
HLA-DMB-262ENST00000498020 A0A0G2JLW4 131 aa9.31□□□□□ -0.92
HLA-DMB-262ENST00000498020 TRIM28Q13263 835 aaKnown RBP9.31□□□□□ -0.92
HLA-DMB-262ENST00000498020 LLPHQ9BRT6 129 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms