RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 PNKPQ96T60 521 aa15.03■□□□□ -0
GAPVD1-220ENST00000497580 DHX8Q14562 1220 aaKnown RBP15.03■□□□□ -0
GAPVD1-220ENST00000497580 CLIC4Q9Y696 253 aa15.03■□□□□ -0
GAPVD1-220ENST00000497580 GIGYF1O75420 1035 aaPredicted RBP15.03■□□□□ -0
GAPVD1-220ENST00000497580 NLRP6P59044 892 aa15.03■□□□□ -0
GAPVD1-220ENST00000497580 MTF1Q14872 753 aa15.03■□□□□ -0
GAPVD1-220ENST00000497580 MAP3K19Q56UN5 1328 aa15.03■□□□□ -0
GAPVD1-220ENST00000497580 ARHGAP6O43182 974 aa15.02■□□□□ -0
GAPVD1-220ENST00000497580 RSRC2Q7L4I2 434 aaKnown RBP15.02■□□□□ -0
GAPVD1-220ENST00000497580 CDC42BPGQ6DT37 1551 aa15.02■□□□□ -0
GAPVD1-220ENST00000497580 NEURL4Q96JN8 1562 aa15.02■□□□□ -0
GAPVD1-220ENST00000497580 CBFA2T2O43439 604 aa15.02□□□□□ -0.01
GAPVD1-220ENST00000497580 ZNF202O95125 648 aa15.02□□□□□ -0.01
GAPVD1-220ENST00000497580 PSEN1P49768 467 aa15.02□□□□□ -0.01
GAPVD1-220ENST00000497580 CORO7P57737 925 aa15.02□□□□□ -0.01
GAPVD1-220ENST00000497580 NLRP12P59046 1061 aa15.02□□□□□ -0.01
GAPVD1-220ENST00000497580 BRD3Q15059 726 aa15.02□□□□□ -0.01
GAPVD1-220ENST00000497580 MCTP2Q6DN12 878 aa15.02□□□□□ -0.01
GAPVD1-220ENST00000497580 ANKRD20A12PQ8NF67 263 aa15.02□□□□□ -0.01
GAPVD1-220ENST00000497580 CXorf56Q9H5V9 222 aa15.02□□□□□ -0.01
GAPVD1-220ENST00000497580 AKAP17AQ02040 695 aaKnown RBP15.02□□□□□ -0.01
GAPVD1-220ENST00000497580 GJB4Q9NTQ9 266 aa15.02□□□□□ -0.01
GAPVD1-220ENST00000497580 FANCLQ9NW38 375 aa15.02□□□□□ -0.01
GAPVD1-220ENST00000497580 ACEP12821 1306 aa15.01□□□□□ -0.01
GAPVD1-220ENST00000497580 MAP2K2P36507 400 aa15.01□□□□□ -0.01
GAPVD1-220ENST00000497580 CRB1P82279 1406 aa15.01□□□□□ -0.01
GAPVD1-220ENST00000497580 G3BP1Q13283 466 aaKnown RBP eCLIP15.01□□□□□ -0.01
GAPVD1-220ENST00000497580 NCAPHQ15003 741 aa15.01□□□□□ -0.01
GAPVD1-220ENST00000497580 KLHDC4Q8TBB5 520 aa15.01□□□□□ -0.01
GAPVD1-220ENST00000497580 MAP3K5Q99683 1374 aa15.01□□□□□ -0.01
GAPVD1-220ENST00000497580 MMS22LQ6ZRQ5 1243 aa15.01□□□□□ -0.01
GAPVD1-220ENST00000497580 NSUN7Q8NE18 718 aaKnown RBP15.01□□□□□ -0.01
GAPVD1-220ENST00000497580 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.01□□□□□ -0.01
GAPVD1-220ENST00000497580 CASP8Q14790 479 aa15.01□□□□□ -0.01
GAPVD1-220ENST00000497580 BEND6Q5SZJ8 279 aaPredicted RBP15.01□□□□□ -0.01
GAPVD1-220ENST00000497580 TADA2BQ86TJ2 420 aa15.01□□□□□ -0.01
GAPVD1-220ENST00000497580 A0A0U1RQJ8 604 aa15□□□□□ -0.01
GAPVD1-220ENST00000497580 HIP1O00291 1037 aa15□□□□□ -0.01
GAPVD1-220ENST00000497580 DNAJC21Q5F1R6 531 aaKnown RBP15□□□□□ -0.01
GAPVD1-220ENST00000497580 ZNF569Q5MCW4 686 aa15□□□□□ -0.01
GAPVD1-220ENST00000497580 FBXW10Q5XX13 1052 aa15□□□□□ -0.01
GAPVD1-220ENST00000497580 IQUBQ8NA54 791 aa15□□□□□ -0.01
GAPVD1-220ENST00000497580 ATRIPQ8WXE1 791 aa15□□□□□ -0.01
GAPVD1-220ENST00000497580 EAF2Q96CJ1 260 aaPredicted RBP15□□□□□ -0.01
GAPVD1-220ENST00000497580 VSNL1P62760 191 aa15□□□□□ -0.01
GAPVD1-220ENST00000497580 OLFM4Q6UX06 510 aa15□□□□□ -0.01
GAPVD1-220ENST00000497580 SYNE3Q6ZMZ3 975 aa15□□□□□ -0.01
GAPVD1-220ENST00000497580 KCNB2Q92953 911 aa15□□□□□ -0.01
GAPVD1-220ENST00000497580 MKRN1Q9UHC7 482 aaKnown RBP15□□□□□ -0.01
GAPVD1-220ENST00000497580 ERLIN2O94905 339 aa15□□□□□ -0.01
GAPVD1-220ENST00000497580 KCNJ6P48051 423 aa15□□□□□ -0.01
GAPVD1-220ENST00000497580 RIN2Q8WYP3 895 aaPredicted RBP15□□□□□ -0.01
GAPVD1-220ENST00000497580 HINFPQ9BQA5 517 aa15□□□□□ -0.01
GAPVD1-220ENST00000497580 PPLO60437 1756 aa14.99□□□□□ -0.01
GAPVD1-220ENST00000497580 MAP2K7O14733 419 aa14.99□□□□□ -0.01
GAPVD1-220ENST00000497580 SPTLC2O15270 562 aa14.99□□□□□ -0.01
GAPVD1-220ENST00000497580 CCT5P48643 541 aa14.99□□□□□ -0.01
GAPVD1-220ENST00000497580 MYL5Q02045 173 aa14.99□□□□□ -0.01
GAPVD1-220ENST00000497580 PNOCQ13519 176 aa14.99□□□□□ -0.01
GAPVD1-220ENST00000497580 AXDND1Q5T1B0 1012 aaPredicted RBP14.99□□□□□ -0.01
GAPVD1-220ENST00000497580 MRPL44Q9H9J2 332 aaKnown RBP14.99□□□□□ -0.01
GAPVD1-220ENST00000497580 CHPF2Q9P2E5 772 aa14.99□□□□□ -0.01
GAPVD1-220ENST00000497580 CLGNO14967 610 aa14.99□□□□□ -0.01
GAPVD1-220ENST00000497580 FAM69CQ0P6D2 419 aa14.99□□□□□ -0.01
GAPVD1-220ENST00000497580 PLEKHO1Q53GL0 409 aaPredicted RBP14.99□□□□□ -0.01
GAPVD1-220ENST00000497580 SRGAP1Q7Z6B7 1085 aa14.99□□□□□ -0.01
GAPVD1-220ENST00000497580 SMARCC1Q92922 1105 aaPredicted RBP14.99□□□□□ -0.01
GAPVD1-220ENST00000497580 ANKZF1Q9H8Y5 726 aa14.99□□□□□ -0.01
GAPVD1-220ENST00000497580 CCDC172P0C7W6 258 aa14.99□□□□□ -0.01
GAPVD1-220ENST00000497580 ADALQ6DHV7 355 aa14.99□□□□□ -0.01
GAPVD1-220ENST00000497580 VSTM4Q8IW00 320 aa14.99□□□□□ -0.01
GAPVD1-220ENST00000497580 RNF40O75150 1001 aa14.98□□□□□ -0.01
GAPVD1-220ENST00000497580 KRT32Q14532 448 aa14.98□□□□□ -0.01
GAPVD1-220ENST00000497580 TRMT44Q8IYL2 757 aaKnown RBP14.98□□□□□ -0.01
GAPVD1-220ENST00000497580 MROH1Q8NDA8 1641 aa14.98□□□□□ -0.01
GAPVD1-220ENST00000497580 PTPRMP28827 1452 aa14.98□□□□□ -0.01
GAPVD1-220ENST00000497580 SOWAHDA6NJG2 315 aa14.98□□□□□ -0.01
GAPVD1-220ENST00000497580 H0YHG0 523 aa14.98□□□□□ -0.01
GAPVD1-220ENST00000497580 CUTAO60888 179 aa14.98□□□□□ -0.01
GAPVD1-220ENST00000497580 NAA16Q6N069 864 aaPredicted RBP14.98□□□□□ -0.01
GAPVD1-220ENST00000497580 AFAP1L1Q8TED9 768 aa14.98□□□□□ -0.01
GAPVD1-220ENST00000497580 HMG20BQ9P0W2 317 aa14.98□□□□□ -0.01
GAPVD1-220ENST00000497580 CEP83Q9Y592 693 aa14.98□□□□□ -0.01
GAPVD1-220ENST00000497580 KIF5CO60282 957 aa14.97□□□□□ -0.01
GAPVD1-220ENST00000497580 TAF5LO75529 589 aa14.97□□□□□ -0.01
GAPVD1-220ENST00000497580 PFKFB1P16118 471 aa14.97□□□□□ -0.01
GAPVD1-220ENST00000497580 CWF19L2Q2TBE0 894 aaKnown RBP14.97□□□□□ -0.01
GAPVD1-220ENST00000497580 TTC19Q6DKK2 380 aaPredicted RBP14.97□□□□□ -0.01
GAPVD1-220ENST00000497580 EFCAB13Q8IY85 973 aa14.97□□□□□ -0.01
GAPVD1-220ENST00000497580 CYP21A2P08686 494 aa14.97□□□□□ -0.01
GAPVD1-220ENST00000497580 LONRF3Q496Y0 759 aa14.97□□□□□ -0.01
GAPVD1-220ENST00000497580 KIFC2Q96AC6 838 aa14.97□□□□□ -0.01
GAPVD1-220ENST00000497580 ACBD3Q9H3P7 528 aa14.97□□□□□ -0.01
GAPVD1-220ENST00000497580 GOLGA6L9A6NEM1 432 aa14.97□□□□□ -0.01
GAPVD1-220ENST00000497580 CTDNEP1O95476 244 aa14.97□□□□□ -0.01
GAPVD1-220ENST00000497580 DHX37Q8IY37 1157 aaKnown RBP14.97□□□□□ -0.01
GAPVD1-220ENST00000497580 ILDR1Q86SU0 546 aaPredicted RBP14.96□□□□□ -0.01
GAPVD1-220ENST00000497580 EYA1Q99502 592 aa14.96□□□□□ -0.01
GAPVD1-220ENST00000497580 ADGRL3Q9HAR2 1447 aa14.96□□□□□ -0.01
GAPVD1-220ENST00000497580 PPFIA4O75335 1185 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms