RNA–Protein interactions for RNA: ENST00000497269.5

MSH5-219, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-219ENST00000497269 IQSEC2Q5JU85 1478 aa9.16□□□□□ -0.94
MSH5-219ENST00000497269 LTKP29376 864 aa9.16□□□□□ -0.94
MSH5-219ENST00000497269 USP5P45974 858 aa9.16□□□□□ -0.94
MSH5-219ENST00000497269 TMCO4Q5TGY1 634 aa9.16□□□□□ -0.94
MSH5-219ENST00000497269 TTC39BQ5VTQ0 682 aaPredicted RBP9.16□□□□□ -0.94
MSH5-219ENST00000497269 C1orf229Q6ZS94 237 aaPredicted RBP9.16□□□□□ -0.94
MSH5-219ENST00000497269 DHX32Q7L7V1 743 aaKnown RBP9.16□□□□□ -0.94
MSH5-219ENST00000497269 GJD3Q8N144 294 aa9.16□□□□□ -0.94
MSH5-219ENST00000497269 SVOPQ8N4V2 548 aa9.16□□□□□ -0.94
MSH5-219ENST00000497269 GOLGA6L1Q8N7Z2 621 aa9.16□□□□□ -0.94
MSH5-219ENST00000497269 KANSL3Q9P2N6 904 aa9.16□□□□□ -0.94
MSH5-219ENST00000497269 ABCC3O15438 1527 aa9.15□□□□□ -0.94
MSH5-219ENST00000497269 MYOM3Q5VTT5 1437 aa9.15□□□□□ -0.94
MSH5-219ENST00000497269 EGFRP00533 1210 aa9.15□□□□□ -0.94
MSH5-219ENST00000497269 CYP2E1P05181 493 aaPredicted RBP9.15□□□□□ -0.94
MSH5-219ENST00000497269 RPLP1P05386 114 aaKnown RBP9.15□□□□□ -0.94
MSH5-219ENST00000497269 FAM50AQ14320 339 aaKnown RBP9.15□□□□□ -0.94
MSH5-219ENST00000497269 CCDC27Q2M243 656 aa9.15□□□□□ -0.94
MSH5-219ENST00000497269 TMC7Q7Z402 723 aa9.15□□□□□ -0.94
MSH5-219ENST00000497269 GALNT6Q8NCL4 622 aa9.15□□□□□ -0.94
MSH5-219ENST00000497269 NIF3L1Q9GZT8 377 aa9.15□□□□□ -0.94
MSH5-219ENST00000497269 ABI2Q9NYB9 513 aaPredicted RBP9.15□□□□□ -0.94
MSH5-219ENST00000497269 STRCP1A6NGW2 1772 aa9.14□□□□□ -0.95
MSH5-219ENST00000497269 GPR182O15218 404 aa9.14□□□□□ -0.95
MSH5-219ENST00000497269 PSAPP07602 524 aa9.14□□□□□ -0.95
MSH5-219ENST00000497269 CELA2BP08218 269 aaPredicted RBP9.14□□□□□ -0.95
MSH5-219ENST00000497269 SLURP2P0DP57 97 aa9.14□□□□□ -0.95
MSH5-219ENST00000497269 DNAJB12Q9NXW2 375 aaKnown RBP9.14□□□□□ -0.95
MSH5-219ENST00000497269 CNTN3Q9P232 1028 aa9.14□□□□□ -0.95
MSH5-219ENST00000497269 GDF2Q9UK05 429 aaPredicted RBP9.14□□□□□ -0.95
MSH5-219ENST00000497269 VWDEQ8N2E2 1590 aa9.14□□□□□ -0.95
MSH5-219ENST00000497269 ERVK-7P63135 1459 aa9.14□□□□□ -0.95
MSH5-219ENST00000497269 ABCC5O15440 1437 aa9.14□□□□□ -0.95
MSH5-219ENST00000497269 KIF15Q9NS87 1388 aa9.13□□□□□ -0.95
MSH5-219ENST00000497269 SIN3BO75182 1162 aa9.13□□□□□ -0.95
MSH5-219ENST00000497269 AMPD1P23109 780 aa9.13□□□□□ -0.95
MSH5-219ENST00000497269 ADH7P40394 386 aa9.13□□□□□ -0.95
MSH5-219ENST00000497269 MAP3K10Q02779 954 aa9.13□□□□□ -0.95
MSH5-219ENST00000497269 EHHADHQ08426 723 aa9.13□□□□□ -0.95
MSH5-219ENST00000497269 ORC1Q13415 861 aa9.13□□□□□ -0.95
MSH5-219ENST00000497269 ZNF385CQ66K41 422 aaPredicted RBP9.13□□□□□ -0.95
MSH5-219ENST00000497269 PDE12Q6L8Q7 609 aaKnown RBP9.13□□□□□ -0.95
MSH5-219ENST00000497269 C1orf127Q8N9H9 656 aa9.13□□□□□ -0.95
MSH5-219ENST00000497269 EDARADDQ8WWZ3 215 aa9.13□□□□□ -0.95
MSH5-219ENST00000497269 SLC26A8Q96RN1 970 aa9.13□□□□□ -0.95
MSH5-219ENST00000497269 RBCK1Q9BYM8 510 aa9.13□□□□□ -0.95
MSH5-219ENST00000497269 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.13□□□□□ -0.95
MSH5-219ENST00000497269 NLRP1Q9C000 1473 aa9.13□□□□□ -0.95
MSH5-219ENST00000497269 MROH1Q8NDA8 1641 aa9.13□□□□□ -0.95
MSH5-219ENST00000497269 SHISA8B8ZZ34 492 aa9.12□□□□□ -0.95
MSH5-219ENST00000497269 J3QW42 95 aa9.12□□□□□ -0.95
MSH5-219ENST00000497269 WIPF1O43516 503 aa9.12□□□□□ -0.95
MSH5-219ENST00000497269 PHACTR2O75167 634 aa9.12□□□□□ -0.95
MSH5-219ENST00000497269 TNFRSF21O75509 655 aa9.12□□□□□ -0.95
MSH5-219ENST00000497269 POLR3DP05423 398 aaPredicted RBP9.12□□□□□ -0.95
MSH5-219ENST00000497269 BCRP11274 1271 aa9.12□□□□□ -0.95
MSH5-219ENST00000497269 CPB1P15086 417 aa9.12□□□□□ -0.95
MSH5-219ENST00000497269 PDE3BQ13370 1112 aa9.12□□□□□ -0.95
MSH5-219ENST00000497269 SLCO4C1Q6ZQN7 724 aa9.12□□□□□ -0.95
MSH5-219ENST00000497269 FAM129BQ96TA1 746 aa9.12□□□□□ -0.95
MSH5-219ENST00000497269 TLR7Q9NYK1 1049 aaKnown RBP9.12□□□□□ -0.95
MSH5-219ENST00000497269 IQGAP1P46940 1657 aa9.12□□□□□ -0.95
MSH5-219ENST00000497269 PTPN23Q9H3S7 1636 aa9.12□□□□□ -0.95
MSH5-219ENST00000497269 MAST1Q9Y2H9 1570 aa9.12□□□□□ -0.95
MSH5-219ENST00000497269 CPS1P31327 1500 aa9.11□□□□□ -0.95
MSH5-219ENST00000497269 PHF20L1A8MW92 1017 aa9.11□□□□□ -0.95
MSH5-219ENST00000497269 ZBTB42B2RXF5 422 aa9.11□□□□□ -0.95
MSH5-219ENST00000497269 ITGAEP38570 1179 aa9.11□□□□□ -0.95
MSH5-219ENST00000497269 PLAURQ03405 335 aa9.11□□□□□ -0.95
MSH5-219ENST00000497269 IDI1Q13907 227 aa9.11□□□□□ -0.95
MSH5-219ENST00000497269 ZSCAN29Q8IWY8 852 aaPredicted RBP9.11□□□□□ -0.95
MSH5-219ENST00000497269 ZSCAN1Q8NBB4 408 aa9.11□□□□□ -0.95
MSH5-219ENST00000497269 NEDD1Q8NHV4 660 aa9.11□□□□□ -0.95
MSH5-219ENST00000497269 AVENQ9NQS1 362 aaPredicted RBP9.11□□□□□ -0.95
MSH5-219ENST00000497269 SLC6A14Q9UN76 642 aa9.11□□□□□ -0.95
MSH5-219ENST00000497269 EID1Q9Y6B2 187 aa9.11□□□□□ -0.95
MSH5-219ENST00000497269 RNF17Q9BXT8 1623 aaKnown RBP9.11□□□□□ -0.95
MSH5-219ENST00000497269 LRRC7Q96NW7 1537 aa9.1□□□□□ -0.95
MSH5-219ENST00000497269 DUOX2Q9NRD8 1548 aa9.1□□□□□ -0.95
MSH5-219ENST00000497269 ALKQ9UM73 1620 aa9.1□□□□□ -0.95
MSH5-219ENST00000497269 ELOA3CA0A087WX78 387 aaPredicted RBP9.1□□□□□ -0.95
MSH5-219ENST00000497269 ELOA3DA6NLF2 546 aaPredicted RBP9.1□□□□□ -0.95
MSH5-219ENST00000497269 EREGO14944 169 aa9.1□□□□□ -0.95
MSH5-219ENST00000497269 OIP5O43482 229 aa9.1□□□□□ -0.95
MSH5-219ENST00000497269 EPXP11678 715 aa9.1□□□□□ -0.95
MSH5-219ENST00000497269 EIF2AK2P19525 551 aaKnown RBP9.1□□□□□ -0.95
MSH5-219ENST00000497269 CES1P23141 567 aa9.1□□□□□ -0.95
MSH5-219ENST00000497269 ELOA3BQ3SY89 546 aa9.1□□□□□ -0.95
MSH5-219ENST00000497269 COL13A1Q5TAT6 717 aaPredicted RBP9.1□□□□□ -0.95
MSH5-219ENST00000497269 FAM35AQ86V20 835 aa9.1□□□□□ -0.95
MSH5-219ENST00000497269 ELOA3Q8NG57 546 aa9.1□□□□□ -0.95
MSH5-219ENST00000497269 SNX29Q8TEQ0 813 aa9.1□□□□□ -0.95
MSH5-219ENST00000497269 NUDT8Q8WV74 236 aa9.1□□□□□ -0.95
MSH5-219ENST00000497269 RRAGCQ9HB90 399 aa9.1□□□□□ -0.95
MSH5-219ENST00000497269 C11orf16Q9NQ32 467 aa9.1□□□□□ -0.95
MSH5-219ENST00000497269 DAPK1P53355 1430 aa9.1□□□□□ -0.95
MSH5-219ENST00000497269 MED1Q15648 1581 aaPredicted RBP9.1□□□□□ -0.95
MSH5-219ENST00000497269 UBR1Q8IWV7 1749 aa9.1□□□□□ -0.95
MSH5-219ENST00000497269 MED14O60244 1454 aa9.09□□□□□ -0.95
MSH5-219ENST00000497269 MAP3K6O95382 1288 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms