RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 MOB2Q70IA6 237 aa21.34■■□□□ 1.01
TRAPPC3-207ENST00000497251 DEFB129Q9H1M3 183 aa21.34■■□□□ 1.01
TRAPPC3-207ENST00000497251 TAF7LQ5H9L4 462 aa21.33■■□□□ 1.01
TRAPPC3-207ENST00000497251 LMBR1LQ6UX01 489 aa21.33■■□□□ 1.01
TRAPPC3-207ENST00000497251 C9orf78Q9NZ63 289 aaPredicted RBP21.33■■□□□ 1.01
TRAPPC3-207ENST00000497251 CHMP3Q9Y3E7 222 aa21.33■■□□□ 1.01
TRAPPC3-207ENST00000497251 ZNF646O15015 1829 aaPredicted RBP21.33■■□□□ 1.01
TRAPPC3-207ENST00000497251 PTPN12Q05209 780 aaKnown RBP21.32■■□□□ 1
TRAPPC3-207ENST00000497251 MANSC4A6NHS7 340 aaPredicted RBP21.31■■□□□ 1
TRAPPC3-207ENST00000497251 F6X3S4 739 aa21.31■■□□□ 1
TRAPPC3-207ENST00000497251 GPR25O00155 361 aa21.31■■□□□ 1
TRAPPC3-207ENST00000497251 TAF5LO75529 589 aa21.31■■□□□ 1
TRAPPC3-207ENST00000497251 ZBTB48P10074 688 aaPredicted RBP21.31■■□□□ 1
TRAPPC3-207ENST00000497251 UBE4AQ14139 1066 aa21.31■■□□□ 1
TRAPPC3-207ENST00000497251 SPRYD7Q5W111 196 aa21.31■■□□□ 1
TRAPPC3-207ENST00000497251 ZNF296Q8WUU4 475 aaPredicted RBP21.31■■□□□ 1
TRAPPC3-207ENST00000497251 SLC10A4Q96EP9 437 aa21.31■■□□□ 1
TRAPPC3-207ENST00000497251 CNNM1Q9NRU3 951 aa21.31■■□□□ 1
TRAPPC3-207ENST00000497251 ANGEL1Q9UNK9 670 aaKnown RBP21.31■■□□□ 1
TRAPPC3-207ENST00000497251 SCAF8Q9UPN6 1271 aaKnown RBP21.31■■□□□ 1
TRAPPC3-207ENST00000497251 FAM205AQ6ZU69 1335 aa21.3■■□□□ 1
TRAPPC3-207ENST00000497251 SPDYE2BA6NHP3 402 aa21.3■■□□□ 1
TRAPPC3-207ENST00000497251 SLC34A2O95436 690 aa21.3■■□□□ 1
TRAPPC3-207ENST00000497251 SPDYE6P0CI01 402 aa21.3■■□□□ 1
TRAPPC3-207ENST00000497251 CERS5Q8N5B7 392 aa21.3■■□□□ 1
TRAPPC3-207ENST00000497251 SRCIN1Q9C0H9 1055 aa21.3■■□□□ 1
TRAPPC3-207ENST00000497251 TBC1D8O95759 1140 aa21.29■■□□□ 1
TRAPPC3-207ENST00000497251 TNFAIP1Q13829 316 aa21.29■■□□□ 1
TRAPPC3-207ENST00000497251 CFAP100Q494V2 611 aa21.29■■□□□ 1
TRAPPC3-207ENST00000497251 HELBQ8NG08 1087 aaPredicted RBP21.29■■□□□ 1
TRAPPC3-207ENST00000497251 FKTNO75072 461 aa21.28■■□□□ 1
TRAPPC3-207ENST00000497251 SALL2Q9Y467 1007 aaPredicted RBP21.28■■□□□ 1
TRAPPC3-207ENST00000497251 IREB2P48200 963 aaKnown RBP21.27■■□□□ 1
TRAPPC3-207ENST00000497251 OTUD7BQ6GQQ9 843 aa21.27■■□□□ 1
TRAPPC3-207ENST00000497251 FBXO46Q6PJ61 603 aaPredicted RBP21.27■■□□□ 1
TRAPPC3-207ENST00000497251 TDRD7Q8NHU6 1098 aaKnown RBP21.27■■□□□ 1
TRAPPC3-207ENST00000497251 SERPINA10Q9UK55 444 aa21.27■■□□□ 1
TRAPPC3-207ENST00000497251 HPS5Q9UPZ3 1129 aa21.27■■□□□ 1
TRAPPC3-207ENST00000497251 SNAP23O00161 211 aa21.26■□□□□ 0.99
TRAPPC3-207ENST00000497251 HIBADHP31937 336 aaKnown RBP21.26■□□□□ 0.99
TRAPPC3-207ENST00000497251 EPHA10Q5JZY3 1008 aa21.26■□□□□ 0.99
TRAPPC3-207ENST00000497251 PRMT6Q96LA8 375 aaPredicted RBP21.26■□□□□ 0.99
TRAPPC3-207ENST00000497251 UTYO14607 1347 aa21.26■□□□□ 0.99
TRAPPC3-207ENST00000497251 MROH5Q6ZUA9 1318 aa21.26■□□□□ 0.99
TRAPPC3-207ENST00000497251 PRKG1Q13976 671 aa21.25■□□□□ 0.99
TRAPPC3-207ENST00000497251 RBM5P52756 815 aaKnown RBP eCLIP21.24■□□□□ 0.99
TRAPPC3-207ENST00000497251 MFSD14BQ5SR56 506 aa21.24■□□□□ 0.99
TRAPPC3-207ENST00000497251 SLC4A10Q6U841 1118 aa21.24■□□□□ 0.99
TRAPPC3-207ENST00000497251 ANKRD13AQ8IZ07 590 aa21.24■□□□□ 0.99
TRAPPC3-207ENST00000497251 SPINK5Q9NQ38 1064 aaPredicted RBP21.24■□□□□ 0.99
TRAPPC3-207ENST00000497251 F8W031 263 aaPredicted RBP21.23■□□□□ 0.99
TRAPPC3-207ENST00000497251 PLIN1O60240 522 aa21.23■□□□□ 0.99
TRAPPC3-207ENST00000497251 HDLBPQ00341 1268 aaKnown RBP21.23■□□□□ 0.99
TRAPPC3-207ENST00000497251 IFNL1Q8IU54 200 aa21.23■□□□□ 0.99
TRAPPC3-207ENST00000497251 TBC1D22AQ8WUA7 517 aa21.23■□□□□ 0.99
TRAPPC3-207ENST00000497251 WNK4Q96J92 1243 aa21.23■□□□□ 0.99
TRAPPC3-207ENST00000497251 ZNF594Q96JF6 807 aaPredicted RBP21.23■□□□□ 0.99
TRAPPC3-207ENST00000497251 FAM84BQ96KN1 310 aaPredicted RBP21.23■□□□□ 0.99
TRAPPC3-207ENST00000497251 RIPOR2Q9Y4F9 1068 aa21.23■□□□□ 0.99
TRAPPC3-207ENST00000497251 SOX10P56693 466 aa21.22■□□□□ 0.99
TRAPPC3-207ENST00000497251 MKRN3Q13064 507 aaKnown RBP21.22■□□□□ 0.99
TRAPPC3-207ENST00000497251 RASA3Q14644 834 aa21.22■□□□□ 0.99
TRAPPC3-207ENST00000497251 RABL6Q3YEC7 729 aaPredicted RBP21.22■□□□□ 0.99
TRAPPC3-207ENST00000497251 SPDYE2Q495Y8 402 aa21.22■□□□□ 0.99
TRAPPC3-207ENST00000497251 MRIQ9BWK5 157 aa21.22■□□□□ 0.99
TRAPPC3-207ENST00000497251 VEZTQ9HBM0 779 aa21.22■□□□□ 0.99
TRAPPC3-207ENST00000497251 ECM29Q5VYK3 1845 aa21.22■□□□□ 0.99
TRAPPC3-207ENST00000497251 VPS37DQ86XT2 251 aa21.21■□□□□ 0.99
TRAPPC3-207ENST00000497251 TTF2Q9UNY4 1162 aaKnown RBP21.21■□□□□ 0.99
TRAPPC3-207ENST00000497251 PTPRCP08575 1304 aa21.21■□□□□ 0.99
TRAPPC3-207ENST00000497251 CLRN2A0PK11 232 aa21.2■□□□□ 0.98
TRAPPC3-207ENST00000497251 USP2O75604 605 aaPredicted RBP21.2■□□□□ 0.98
TRAPPC3-207ENST00000497251 TNNI2P48788 182 aa21.2■□□□□ 0.98
TRAPPC3-207ENST00000497251 CAVIN4Q5BKX8 364 aa21.2■□□□□ 0.98
TRAPPC3-207ENST00000497251 NBPF12Q5TAG4 269 aaPredicted RBP21.2■□□□□ 0.98
TRAPPC3-207ENST00000497251 SUGT1Q9Y2Z0 365 aa21.2■□□□□ 0.98
TRAPPC3-207ENST00000497251 TESPA1A2RU30 521 aaPredicted RBP21.19■□□□□ 0.98
TRAPPC3-207ENST00000497251 INTS3Q68E01 1043 aaKnown RBP21.19■□□□□ 0.98
TRAPPC3-207ENST00000497251 FBXO33Q7Z6M2 555 aa21.19■□□□□ 0.98
TRAPPC3-207ENST00000497251 DZIP1LQ8IYY4 767 aaKnown RBP21.19■□□□□ 0.98
TRAPPC3-207ENST00000497251 FAM9BQ8IZU0 186 aa21.19■□□□□ 0.98
TRAPPC3-207ENST00000497251 KAZALD1Q96I82 304 aa21.19■□□□□ 0.98
TRAPPC3-207ENST00000497251 SUCLG2Q96I99 432 aa21.19■□□□□ 0.98
TRAPPC3-207ENST00000497251 ZNF70Q9UC06 446 aaPredicted RBP21.19■□□□□ 0.98
TRAPPC3-207ENST00000497251 KIF16BQ96L93 1317 aa21.19■□□□□ 0.98
TRAPPC3-207ENST00000497251 A0A1B0GUL6 1792 aa21.18■□□□□ 0.98
TRAPPC3-207ENST00000497251 NBPF7P0C2Y1 421 aaPredicted RBP21.18■□□□□ 0.98
TRAPPC3-207ENST00000497251 GYG1P46976 350 aa21.18■□□□□ 0.98
TRAPPC3-207ENST00000497251 HOOK2Q96ED9 719 aa21.18■□□□□ 0.98
TRAPPC3-207ENST00000497251 ERO1AQ96HE7 468 aa21.18■□□□□ 0.98
TRAPPC3-207ENST00000497251 ZNF521Q96K83 1311 aa21.18■□□□□ 0.98
TRAPPC3-207ENST00000497251 ARHGEF6Q15052 776 aa21.17■□□□□ 0.98
TRAPPC3-207ENST00000497251 CLMNQ96JQ2 1002 aa21.17■□□□□ 0.98
TRAPPC3-207ENST00000497251 PCDHAC2Q9Y5I4 1007 aa21.17■□□□□ 0.98
TRAPPC3-207ENST00000497251 SSC5DA1L4H1 1573 aa21.17■□□□□ 0.98
TRAPPC3-207ENST00000497251 TNRC18O15417 2968 aaPredicted RBP21.16■□□□□ 0.98
TRAPPC3-207ENST00000497251 PDE8BO95263 885 aa21.16■□□□□ 0.98
TRAPPC3-207ENST00000497251 CRKP46108 304 aa21.16■□□□□ 0.98
TRAPPC3-207ENST00000497251 PRPF38BQ5VTL8 546 aaKnown RBP21.16■□□□□ 0.98
TRAPPC3-207ENST00000497251 FKBP1CQ5VVH2 108 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms