RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 DENND2AQ9ULE3 1009 aa18.07■□□□□ 0.48
HDAC9-226ENST00000496026 ZBTB12Q9Y330 459 aaPredicted RBP18.07■□□□□ 0.48
HDAC9-226ENST00000496026 GMPSP49915 693 aaPredicted RBP18.06■□□□□ 0.48
HDAC9-226ENST00000496026 ARAP2Q8WZ64 1704 aa18.06■□□□□ 0.48
HDAC9-226ENST00000496026 FAM205AQ6ZU69 1335 aa18.05■□□□□ 0.48
HDAC9-226ENST00000496026 RPS12P25398 132 aaKnown RBP18.05■□□□□ 0.48
HDAC9-226ENST00000496026 ARID4AP29374 1257 aaPredicted RBP18.05■□□□□ 0.48
HDAC9-226ENST00000496026 LMOD1P29536 600 aaPredicted RBP18.05■□□□□ 0.48
HDAC9-226ENST00000496026 RASGRF1Q13972 1273 aa18.05■□□□□ 0.48
HDAC9-226ENST00000496026 GPATCH3Q96I76 525 aa18.05■□□□□ 0.48
HDAC9-226ENST00000496026 MXD3Q9BW11 206 aa18.05■□□□□ 0.48
HDAC9-226ENST00000496026 MYO3BQ8WXR4 1341 aa18.04■□□□□ 0.48
HDAC9-226ENST00000496026 NUCB1Q02818 461 aa18.04■□□□□ 0.48
HDAC9-226ENST00000496026 MFSD14BQ5SR56 506 aa18.04■□□□□ 0.48
HDAC9-226ENST00000496026 AGBL3Q8NEM8 1001 aa18.04■□□□□ 0.48
HDAC9-226ENST00000496026 WDR66Q8TBY9 1149 aa18.04■□□□□ 0.48
HDAC9-226ENST00000496026 TBC1D22AQ8WUA7 517 aa18.04■□□□□ 0.48
HDAC9-226ENST00000496026 L3MBTL3Q96JM7 780 aaPredicted RBP18.04■□□□□ 0.48
HDAC9-226ENST00000496026 LNPKQ9C0E8 428 aa18.04■□□□□ 0.48
HDAC9-226ENST00000496026 UTRNP46939 3433 aa18.04■□□□□ 0.48
HDAC9-226ENST00000496026 FKBP1AP62942 108 aaKnown RBP18.03■□□□□ 0.48
HDAC9-226ENST00000496026 SCARF1Q14162 830 aa18.03■□□□□ 0.48
HDAC9-226ENST00000496026 CHD1LQ86WJ1 897 aa18.03■□□□□ 0.48
HDAC9-226ENST00000496026 C16orf71Q8IYS4 520 aaPredicted RBP18.03■□□□□ 0.48
HDAC9-226ENST00000496026 SPATA5Q8NB90 893 aa18.03■□□□□ 0.48
HDAC9-226ENST00000496026 DPF2Q92785 391 aa18.03■□□□□ 0.48
HDAC9-226ENST00000496026 ZNF512BQ96KM6 892 aaPredicted RBP18.03■□□□□ 0.48
HDAC9-226ENST00000496026 GPBP1L1Q9HC44 474 aaPredicted RBP18.03■□□□□ 0.48
HDAC9-226ENST00000496026 HMG20BQ9P0W2 317 aa18.03■□□□□ 0.48
HDAC9-226ENST00000496026 IQCA1LA6NCM1 817 aa18.02■□□□□ 0.48
HDAC9-226ENST00000496026 ZBTB22O15209 634 aa18.02■□□□□ 0.48
HDAC9-226ENST00000496026 MCAMP43121 646 aa18.02■□□□□ 0.48
HDAC9-226ENST00000496026 SCNN1DP51172 638 aa18.02■□□□□ 0.48
HDAC9-226ENST00000496026 PI16Q6UXB8 463 aa18.02■□□□□ 0.48
HDAC9-226ENST00000496026 RRAGCQ9HB90 399 aa18.02■□□□□ 0.48
HDAC9-226ENST00000496026 SNRKQ9NRH2 765 aa18.02■□□□□ 0.48
HDAC9-226ENST00000496026 ECHDC1Q9NTX5 307 aa18.02■□□□□ 0.48
HDAC9-226ENST00000496026 PPP4R2Q9NY27 417 aa18.02■□□□□ 0.48
HDAC9-226ENST00000496026 GPRC5DQ9NZD1 345 aa18.02■□□□□ 0.48
HDAC9-226ENST00000496026 COL1A1P02452 1464 aaPredicted RBP18.01■□□□□ 0.47
HDAC9-226ENST00000496026 PDS5AQ29RF7 1337 aaKnown RBP18.01■□□□□ 0.47
HDAC9-226ENST00000496026 SCN9AQ15858 1988 aa18.01■□□□□ 0.47
HDAC9-226ENST00000496026 F8W031 263 aaPredicted RBP18.01■□□□□ 0.47
HDAC9-226ENST00000496026 H7C1D1 291 aa18.01■□□□□ 0.47
HDAC9-226ENST00000496026 CENPQQ7L2Z9 268 aaPredicted RBP18.01■□□□□ 0.47
HDAC9-226ENST00000496026 KIAA0825Q8IV33 1275 aa18.01■□□□□ 0.47
HDAC9-226ENST00000496026 MICALL2Q8IY33 904 aa18.01■□□□□ 0.47
HDAC9-226ENST00000496026 OGFOD1Q8N543 542 aa18.01■□□□□ 0.47
HDAC9-226ENST00000496026 CERS5Q8N5B7 392 aa18.01■□□□□ 0.47
HDAC9-226ENST00000496026 GMLQ99445 158 aa18.01■□□□□ 0.47
HDAC9-226ENST00000496026 NMRK2Q9NPI5 230 aa18.01■□□□□ 0.47
HDAC9-226ENST00000496026 CNOT7Q9UIV1 285 aaKnown RBP18.01■□□□□ 0.47
HDAC9-226ENST00000496026 HACL1Q9UJ83 578 aa18.01■□□□□ 0.47
HDAC9-226ENST00000496026 HDAC9Q9UKV0 1011 aa18.01■□□□□ 0.47
HDAC9-226ENST00000496026 USP17L8P0C7I0 530 aa18■□□□□ 0.47
HDAC9-226ENST00000496026 VEGFAP15692 232 aaPredicted RBP18■□□□□ 0.47
HDAC9-226ENST00000496026 ATP5JP18859 108 aa18■□□□□ 0.47
HDAC9-226ENST00000496026 EPS15P42566 896 aa18■□□□□ 0.47
HDAC9-226ENST00000496026 ZGPATQ8N5A5 531 aaKnown RBP18■□□□□ 0.47
HDAC9-226ENST00000496026 OTUD7AQ8TE49 926 aaPredicted RBP18■□□□□ 0.47
HDAC9-226ENST00000496026 MX1P20591 662 aa17.99■□□□□ 0.47
HDAC9-226ENST00000496026 ZAP70P43403 619 aa17.99■□□□□ 0.47
HDAC9-226ENST00000496026 ZNF784Q8NCA9 323 aaPredicted RBP17.99■□□□□ 0.47
HDAC9-226ENST00000496026 BOLA2Q9H3K6 86 aa17.99■□□□□ 0.47
HDAC9-226ENST00000496026 ABCF2Q9UG63 623 aa17.99■□□□□ 0.47
HDAC9-226ENST00000496026 SALL1Q9NSC2 1324 aa17.98■□□□□ 0.47
HDAC9-226ENST00000496026 SHTN1A0MZ66 631 aa17.98■□□□□ 0.47
HDAC9-226ENST00000496026 POTECB2RU33 542 aa17.98■□□□□ 0.47
HDAC9-226ENST00000496026 LDHBP07195 334 aaKnown RBP17.98■□□□□ 0.47
HDAC9-226ENST00000496026 EPHX2P34913 555 aa17.98■□□□□ 0.47
HDAC9-226ENST00000496026 TSHZ3Q63HK5 1081 aa17.98■□□□□ 0.47
HDAC9-226ENST00000496026 SPTY2D1Q68D10 685 aaPredicted RBP17.98■□□□□ 0.47
HDAC9-226ENST00000496026 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.98■□□□□ 0.47
HDAC9-226ENST00000496026 DNAJC2Q99543 621 aaKnown RBP17.98■□□□□ 0.47
HDAC9-226ENST00000496026 TTF2Q9UNY4 1162 aaKnown RBP17.98■□□□□ 0.47
HDAC9-226ENST00000496026 SUGT1Q9Y2Z0 365 aa17.98■□□□□ 0.47
HDAC9-226ENST00000496026 WDR90Q96KV7 1748 aa17.98■□□□□ 0.47
HDAC9-226ENST00000496026 TTC41PQ6P2S7 1318 aa17.98■□□□□ 0.47
HDAC9-226ENST00000496026 ERC2O15083 957 aa17.97■□□□□ 0.47
HDAC9-226ENST00000496026 MMP14P50281 582 aa17.97■□□□□ 0.47
HDAC9-226ENST00000496026 ZNF280AP59817 542 aaPredicted RBP17.97■□□□□ 0.47
HDAC9-226ENST00000496026 GRIK5Q16478 980 aa17.97■□□□□ 0.47
HDAC9-226ENST00000496026 RBM26Q5T8P6 1007 aaKnown RBP17.97■□□□□ 0.47
HDAC9-226ENST00000496026 TBC1D9Q6ZT07 1266 aa17.97■□□□□ 0.47
HDAC9-226ENST00000496026 TAF1DQ9H5J8 278 aaPredicted RBP17.97■□□□□ 0.47
HDAC9-226ENST00000496026 ADARB2Q9NS39 739 aaKnown RBP17.97■□□□□ 0.47
HDAC9-226ENST00000496026 LRP2BPQ9P2M1 347 aa17.97■□□□□ 0.47
HDAC9-226ENST00000496026 NDUFB9Q9Y6M9 179 aa17.97■□□□□ 0.47
HDAC9-226ENST00000496026 MAST3O60307 1309 aa17.97■□□□□ 0.47
HDAC9-226ENST00000496026 PSME4Q14997 1843 aa17.96■□□□□ 0.47
HDAC9-226ENST00000496026 CYP2E1P05181 493 aaPredicted RBP17.96■□□□□ 0.47
HDAC9-226ENST00000496026 PRDX5P30044 214 aa17.96■□□□□ 0.47
HDAC9-226ENST00000496026 EAPPQ56P03 285 aaPredicted RBP17.96■□□□□ 0.47
HDAC9-226ENST00000496026 ERICH6Q7L0X2 663 aa17.96■□□□□ 0.47
HDAC9-226ENST00000496026 MYOZ2Q9NPC6 264 aa17.96■□□□□ 0.47
HDAC9-226ENST00000496026 SALL3Q9BXA9 1300 aa17.96■□□□□ 0.46
HDAC9-226ENST00000496026 GLRX3O76003 335 aaKnown RBP17.95■□□□□ 0.46
HDAC9-226ENST00000496026 RBM5P52756 815 aaKnown RBP eCLIP17.95■□□□□ 0.46
HDAC9-226ENST00000496026 PDE1AP54750 535 aa17.95■□□□□ 0.46
HDAC9-226ENST00000496026 TTF1Q15361 905 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms