RNA–Protein interactions for RNA: ENST00000495666.5

RFTN1-211, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-211ENST00000495666 CHAF1AQ13111 956 aaPredicted RBP13.5□□□□□ -0.25
RFTN1-211ENST00000495666 CERS5Q8N5B7 392 aa13.5□□□□□ -0.25
RFTN1-211ENST00000495666 ABHD8Q96I13 439 aa13.5□□□□□ -0.25
RFTN1-211ENST00000495666 HHIPL1Q96JK4 782 aa13.5□□□□□ -0.25
RFTN1-211ENST00000495666 ECM29Q5VYK3 1845 aa13.5□□□□□ -0.25
RFTN1-211ENST00000495666 FAM155AB1AL88 458 aaPredicted RBP13.49□□□□□ -0.25
RFTN1-211ENST00000495666 FRAT2O75474 233 aaPredicted RBP13.49□□□□□ -0.25
RFTN1-211ENST00000495666 NF2P35240 595 aa13.49□□□□□ -0.25
RFTN1-211ENST00000495666 DLGAP5Q15398 846 aa13.49□□□□□ -0.25
RFTN1-211ENST00000495666 RASAL3Q86YV0 1011 aa13.49□□□□□ -0.25
RFTN1-211ENST00000495666 ZNF609O15014 1411 aa13.48□□□□□ -0.25
RFTN1-211ENST00000495666 SLC10A3P09131 477 aa13.48□□□□□ -0.25
RFTN1-211ENST00000495666 DGKZQ13574 1117 aa13.48□□□□□ -0.25
RFTN1-211ENST00000495666 CFAP100Q494V2 611 aa13.48□□□□□ -0.25
RFTN1-211ENST00000495666 LRRC24Q50LG9 513 aa13.48□□□□□ -0.25
RFTN1-211ENST00000495666 METTL24Q5JXM2 366 aa13.48□□□□□ -0.25
RFTN1-211ENST00000495666 VPS37DQ86XT2 251 aa13.48□□□□□ -0.25
RFTN1-211ENST00000495666 CCDC102AQ96A19 550 aa13.48□□□□□ -0.25
RFTN1-211ENST00000495666 KAZALD1Q96I82 304 aa13.48□□□□□ -0.25
RFTN1-211ENST00000495666 MYH13Q9UKX3 1938 aa13.48□□□□□ -0.25
RFTN1-211ENST00000495666 AOX1Q06278 1338 aa13.47□□□□□ -0.25
RFTN1-211ENST00000495666 PITPNM2Q9BZ72 1349 aa13.47□□□□□ -0.25
RFTN1-211ENST00000495666 SLFN5Q08AF3 891 aa13.47□□□□□ -0.25
RFTN1-211ENST00000495666 MCOLN1Q9GZU1 580 aa13.47□□□□□ -0.25
RFTN1-211ENST00000495666 ANGEL1Q9UNK9 670 aaKnown RBP13.47□□□□□ -0.25
RFTN1-211ENST00000495666 MFSD14BQ5SR56 506 aa13.46□□□□□ -0.25
RFTN1-211ENST00000495666 APOBEC3FQ8IUX4 373 aaKnown RBP13.46□□□□□ -0.25
RFTN1-211ENST00000495666 SIL1Q9H173 461 aa13.46□□□□□ -0.25
RFTN1-211ENST00000495666 RNF186Q9NXI6 227 aa13.46□□□□□ -0.25
RFTN1-211ENST00000495666 ARAP2Q8WZ64 1704 aa13.46□□□□□ -0.25
RFTN1-211ENST00000495666 IRS2Q9Y4H2 1338 aa13.45□□□□□ -0.26
RFTN1-211ENST00000495666 CA12O43570 354 aa13.45□□□□□ -0.26
RFTN1-211ENST00000495666 MYO1BO43795 1136 aa13.45□□□□□ -0.26
RFTN1-211ENST00000495666 HIBADHP31937 336 aaKnown RBP13.45□□□□□ -0.26
RFTN1-211ENST00000495666 ANKRD44Q8N8A2 993 aa13.45□□□□□ -0.26
RFTN1-211ENST00000495666 CSRNP1Q96S65 589 aa13.45□□□□□ -0.26
RFTN1-211ENST00000495666 TTF2Q9UNY4 1162 aaKnown RBP13.45□□□□□ -0.26
RFTN1-211ENST00000495666 PTPRCP08575 1304 aa13.44□□□□□ -0.26
RFTN1-211ENST00000495666 TBC1D8O95759 1140 aa13.44□□□□□ -0.26
RFTN1-211ENST00000495666 IL1R1P14778 569 aa13.44□□□□□ -0.26
RFTN1-211ENST00000495666 PTPN12Q05209 780 aaKnown RBP13.44□□□□□ -0.26
RFTN1-211ENST00000495666 PRMT6Q96LA8 375 aaPredicted RBP13.44□□□□□ -0.26
RFTN1-211ENST00000495666 DEFB129Q9H1M3 183 aa13.44□□□□□ -0.26
RFTN1-211ENST00000495666 NOB1Q9ULX3 412 aaKnown RBP13.44□□□□□ -0.26
RFTN1-211ENST00000495666 TCP10L2B9ZVM9 353 aa13.43□□□□□ -0.26
RFTN1-211ENST00000495666 GRIK5Q16478 980 aa13.43□□□□□ -0.26
RFTN1-211ENST00000495666 ARMC9Q7Z3E5 817 aa13.43□□□□□ -0.26
RFTN1-211ENST00000495666 FAM84BQ96KN1 310 aaPredicted RBP13.43□□□□□ -0.26
RFTN1-211ENST00000495666 TDRD3Q9H7E2 651 aaKnown RBP13.43□□□□□ -0.26
RFTN1-211ENST00000495666 MROH5Q6ZUA9 1318 aa13.42□□□□□ -0.26
RFTN1-211ENST00000495666 OTOFQ9HC10 1997 aa13.42□□□□□ -0.26
RFTN1-211ENST00000495666 SPDYE2BA6NHP3 402 aa13.42□□□□□ -0.26
RFTN1-211ENST00000495666 UBTFL1P0CB47 393 aaPredicted RBP13.42□□□□□ -0.26
RFTN1-211ENST00000495666 SPDYE6P0CI01 402 aa13.42□□□□□ -0.26
RFTN1-211ENST00000495666 BCAMP50895 628 aa13.42□□□□□ -0.26
RFTN1-211ENST00000495666 CACNB3P54284 484 aa13.42□□□□□ -0.26
RFTN1-211ENST00000495666 FKBP1BP68106 108 aa13.42□□□□□ -0.26
RFTN1-211ENST00000495666 UBE4AQ14139 1066 aa13.42□□□□□ -0.26
RFTN1-211ENST00000495666 NBPF12Q5TAG4 269 aaPredicted RBP13.42□□□□□ -0.26
RFTN1-211ENST00000495666 CLMNQ96JQ2 1002 aa13.42□□□□□ -0.26
RFTN1-211ENST00000495666 USP44Q9H0E7 712 aa13.42□□□□□ -0.26
RFTN1-211ENST00000495666 RIPOR2Q9Y4F9 1068 aa13.42□□□□□ -0.26
RFTN1-211ENST00000495666 SSC5DA1L4H1 1573 aa13.41□□□□□ -0.26
RFTN1-211ENST00000495666 AK9Q5TCS8 1911 aa13.41□□□□□ -0.26
RFTN1-211ENST00000495666 CAVIN4Q5BKX8 364 aa13.41□□□□□ -0.26
RFTN1-211ENST00000495666 C15orf52Q6ZUT6 534 aaKnown RBP13.41□□□□□ -0.26
RFTN1-211ENST00000495666 CDAN1Q8IWY9 1227 aa13.41□□□□□ -0.26
RFTN1-211ENST00000495666 FRAT1Q92837 279 aaPredicted RBP13.41□□□□□ -0.26
RFTN1-211ENST00000495666 UTYO14607 1347 aa13.4□□□□□ -0.26
RFTN1-211ENST00000495666 RASA3Q14644 834 aa13.4□□□□□ -0.26
RFTN1-211ENST00000495666 TDRD7Q8NHU6 1098 aaKnown RBP13.4□□□□□ -0.26
RFTN1-211ENST00000495666 ZBED3Q96IU2 234 aaPredicted RBP13.4□□□□□ -0.26
RFTN1-211ENST00000495666 PA2G4Q9UQ80 394 aaKnown RBP13.4□□□□□ -0.26
RFTN1-211ENST00000495666 LRRFIP2Q9Y608 721 aaKnown RBP13.4□□□□□ -0.26
RFTN1-211ENST00000495666 CRKP46108 304 aa13.39□□□□□ -0.27
RFTN1-211ENST00000495666 SOX10P56693 466 aa13.39□□□□□ -0.27
RFTN1-211ENST00000495666 ALDH1L2Q3SY69 923 aa13.39□□□□□ -0.27
RFTN1-211ENST00000495666 RABL6Q3YEC7 729 aaPredicted RBP13.39□□□□□ -0.27
RFTN1-211ENST00000495666 SLC10A4Q96EP9 437 aa13.39□□□□□ -0.27
RFTN1-211ENST00000495666 ZNF70Q9UC06 446 aaPredicted RBP13.39□□□□□ -0.27
RFTN1-211ENST00000495666 TNNQ9UQP3 1299 aa13.39□□□□□ -0.27
RFTN1-211ENST00000495666 PPP1R12BO60237 982 aaPredicted RBP13.38□□□□□ -0.27
RFTN1-211ENST00000495666 PDE8BO95263 885 aa13.38□□□□□ -0.27
RFTN1-211ENST00000495666 IFIT1P09914 478 aaKnown RBP13.38□□□□□ -0.27
RFTN1-211ENST00000495666 SLC5A1P13866 664 aa13.38□□□□□ -0.27
RFTN1-211ENST00000495666 PUM3Q15397 648 aaKnown RBP13.38□□□□□ -0.27
RFTN1-211ENST00000495666 DZIP1LQ8IYY4 767 aaKnown RBP13.38□□□□□ -0.27
RFTN1-211ENST00000495666 CLUAP1Q96AJ1 413 aa13.38□□□□□ -0.27
RFTN1-211ENST00000495666 MEIS3Q99687 375 aa13.38□□□□□ -0.27
RFTN1-211ENST00000495666 TMEM39BQ9GZU3 492 aa13.38□□□□□ -0.27
RFTN1-211ENST00000495666 ELP3Q9H9T3 547 aa13.38□□□□□ -0.27
RFTN1-211ENST00000495666 SAGE1Q9NXZ1 904 aa13.38□□□□□ -0.27
RFTN1-211ENST00000495666 FAM205AQ6ZU69 1335 aa13.38□□□□□ -0.27
RFTN1-211ENST00000495666 COL1A1P02452 1464 aaPredicted RBP13.37□□□□□ -0.27
RFTN1-211ENST00000495666 EYA2O00167 538 aa13.37□□□□□ -0.27
RFTN1-211ENST00000495666 ECM2O94769 699 aaPredicted RBP13.37□□□□□ -0.27
RFTN1-211ENST00000495666 VGLL2Q8N8G2 317 aa13.37□□□□□ -0.27
RFTN1-211ENST00000495666 IREB2P48200 963 aaKnown RBP13.36□□□□□ -0.27
RFTN1-211ENST00000495666 FKBP1AP62942 108 aaKnown RBP13.36□□□□□ -0.27
RFTN1-211ENST00000495666 SREBF2Q12772 1141 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms