RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 LPIN2Q92539 896 aa21.94■■□□□ 1.1
HDAC4-211ENST00000494800 COPRSQ9NQ92 184 aa21.94■■□□□ 1.1
HDAC4-211ENST00000494800 PITPNM2Q9BZ72 1349 aa21.94■■□□□ 1.1
HDAC4-211ENST00000494800 RASSF10A6NK89 507 aa21.93■■□□□ 1.1
HDAC4-211ENST00000494800 MTX1Q13505 466 aa21.93■■□□□ 1.1
HDAC4-211ENST00000494800 CST9Q5W186 159 aa21.93■■□□□ 1.1
HDAC4-211ENST00000494800 FAM205AQ6ZU69 1335 aa21.92■■□□□ 1.1
HDAC4-211ENST00000494800 PAXIP1Q6ZW49 1069 aaPredicted RBP21.92■■□□□ 1.1
HDAC4-211ENST00000494800 ATG9AQ7Z3C6 839 aa21.92■■□□□ 1.1
HDAC4-211ENST00000494800 FBXO33Q7Z6M2 555 aa21.92■■□□□ 1.1
HDAC4-211ENST00000494800 ADM5C9JUS6 153 aa21.91■■□□□ 1.1
HDAC4-211ENST00000494800 DLGAP5Q15398 846 aa21.91■■□□□ 1.1
HDAC4-211ENST00000494800 MFSD14BQ5SR56 506 aa21.91■■□□□ 1.1
HDAC4-211ENST00000494800 JAG2Q9Y219 1238 aa21.91■■□□□ 1.1
HDAC4-211ENST00000494800 TLL2Q9Y6L7 1015 aa21.91■■□□□ 1.1
HDAC4-211ENST00000494800 F8W031 263 aaPredicted RBP21.9■■□□□ 1.1
HDAC4-211ENST00000494800 WNT10BO00744 389 aa21.9■■□□□ 1.1
HDAC4-211ENST00000494800 FGFR2P21802 821 aa21.9■■□□□ 1.1
HDAC4-211ENST00000494800 ECE1P42892 770 aa21.9■■□□□ 1.1
HDAC4-211ENST00000494800 ATP2B3Q16720 1220 aa21.9■■□□□ 1.1
HDAC4-211ENST00000494800 NBPF9Q3BBW0 867 aa21.9■■□□□ 1.1
HDAC4-211ENST00000494800 CERS5Q8N5B7 392 aa21.9■■□□□ 1.1
HDAC4-211ENST00000494800 TBC1D22AQ8WUA7 517 aa21.9■■□□□ 1.1
HDAC4-211ENST00000494800 PA2G4Q9UQ80 394 aaKnown RBP21.9■■□□□ 1.1
HDAC4-211ENST00000494800 ASTN2O75129 1339 aaPredicted RBP21.89■■□□□ 1.1
HDAC4-211ENST00000494800 MYO1BO43795 1136 aa21.89■■□□□ 1.09
HDAC4-211ENST00000494800 VEGFBP49765 207 aa21.89■■□□□ 1.09
HDAC4-211ENST00000494800 C2orf69Q8N8R5 385 aa21.89■■□□□ 1.09
HDAC4-211ENST00000494800 TRPM7Q96QT4 1865 aa21.89■■□□□ 1.09
HDAC4-211ENST00000494800 ZNF646O15015 1829 aaPredicted RBP21.88■■□□□ 1.09
HDAC4-211ENST00000494800 BCAMP50895 628 aa21.88■■□□□ 1.09
HDAC4-211ENST00000494800 CHAF1AQ13111 956 aaPredicted RBP21.88■■□□□ 1.09
HDAC4-211ENST00000494800 SAPCD2Q86UD0 394 aa21.88■■□□□ 1.09
HDAC4-211ENST00000494800 APOBEC3FQ8IUX4 373 aaKnown RBP21.88■■□□□ 1.09
HDAC4-211ENST00000494800 GNL3LQ9NVN8 582 aaKnown RBP21.88■■□□□ 1.09
HDAC4-211ENST00000494800 RCAN3Q9UKA8 241 aa21.88■■□□□ 1.09
HDAC4-211ENST00000494800 IQSEC3Q9UPP2 1182 aaPredicted RBP21.88■■□□□ 1.09
HDAC4-211ENST00000494800 RBM5P52756 815 aaKnown RBP eCLIP21.87■■□□□ 1.09
HDAC4-211ENST00000494800 MTMR14Q8NCE2 650 aa21.87■■□□□ 1.09
HDAC4-211ENST00000494800 CDCA5Q96FF9 252 aa21.87■■□□□ 1.09
HDAC4-211ENST00000494800 HHIPL1Q96JK4 782 aa21.87■■□□□ 1.09
HDAC4-211ENST00000494800 AKAP2Q9Y2D5 859 aa21.87■■□□□ 1.09
HDAC4-211ENST00000494800 WDR33Q9C0J8 1336 aaKnown RBP21.86■■□□□ 1.09
HDAC4-211ENST00000494800 GBA2Q9HCG7 927 aaPredicted RBP21.86■■□□□ 1.09
HDAC4-211ENST00000494800 TTF2Q9UNY4 1162 aaKnown RBP21.86■■□□□ 1.09
HDAC4-211ENST00000494800 RLBP1P12271 317 aa21.85■■□□□ 1.09
HDAC4-211ENST00000494800 G3BP1Q13283 466 aaKnown RBP eCLIP21.85■■□□□ 1.09
HDAC4-211ENST00000494800 CFAP100Q494V2 611 aa21.85■■□□□ 1.09
HDAC4-211ENST00000494800 CAPNS2Q96L46 248 aa21.85■■□□□ 1.09
HDAC4-211ENST00000494800 SERPINA10Q9UK55 444 aa21.85■■□□□ 1.09
HDAC4-211ENST00000494800 ZBTB7BO15156 539 aaPredicted RBP21.84■■□□□ 1.09
HDAC4-211ENST00000494800 NF2P35240 595 aa21.84■■□□□ 1.09
HDAC4-211ENST00000494800 HUNKP57058 714 aa21.84■■□□□ 1.09
HDAC4-211ENST00000494800 GRM1Q13255 1194 aa21.84■■□□□ 1.09
HDAC4-211ENST00000494800 DLK2Q6UY11 383 aa21.84■■□□□ 1.09
HDAC4-211ENST00000494800 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.84■■□□□ 1.09
HDAC4-211ENST00000494800 PNMA6EA0A0J9YXQ4 647 aa21.83■■□□□ 1.09
HDAC4-211ENST00000494800 SPDYE2BA6NHP3 402 aa21.83■■□□□ 1.09
HDAC4-211ENST00000494800 SPDYE6P0CI01 402 aa21.83■■□□□ 1.09
HDAC4-211ENST00000494800 CYP4F22Q6NT55 531 aa21.83■■□□□ 1.09
HDAC4-211ENST00000494800 WDR66Q8TBY9 1149 aa21.83■■□□□ 1.09
HDAC4-211ENST00000494800 PANK1Q8TE04 598 aa21.83■■□□□ 1.09
HDAC4-211ENST00000494800 ZBED3Q96IU2 234 aaPredicted RBP21.83■■□□□ 1.09
HDAC4-211ENST00000494800 CHMP4BQ9H444 224 aaKnown RBP21.83■■□□□ 1.09
HDAC4-211ENST00000494800 SUGT1Q9Y2Z0 365 aa21.83■■□□□ 1.09
HDAC4-211ENST00000494800 MAST3O60307 1309 aa21.82■■□□□ 1.08
HDAC4-211ENST00000494800 SEMA3EO15041 775 aa21.82■■□□□ 1.08
HDAC4-211ENST00000494800 HSPA1AP0DMV8 641 aaKnown RBP21.82■■□□□ 1.08
HDAC4-211ENST00000494800 HSPA1BP0DMV9 641 aaKnown RBP21.82■■□□□ 1.08
HDAC4-211ENST00000494800 FKBP1BP68106 108 aa21.82■■□□□ 1.08
HDAC4-211ENST00000494800 ATP8B2P98198 1209 aa21.82■■□□□ 1.08
HDAC4-211ENST00000494800 TFCP2Q12800 502 aa21.82■■□□□ 1.08
HDAC4-211ENST00000494800 AIDAQ96BJ3 306 aa21.82■■□□□ 1.08
HDAC4-211ENST00000494800 MAP2K1Q02750 393 aaPredicted RBP21.81■■□□□ 1.08
HDAC4-211ENST00000494800 OS9Q13438 667 aaPredicted RBP21.81■■□□□ 1.08
HDAC4-211ENST00000494800 C1orf115Q9H7X2 142 aa21.81■■□□□ 1.08
HDAC4-211ENST00000494800 COL1A1P02452 1464 aaPredicted RBP21.8■■□□□ 1.08
HDAC4-211ENST00000494800 HDLBPQ00341 1268 aaKnown RBP21.8■■□□□ 1.08
HDAC4-211ENST00000494800 MVPQ14764 893 aaKnown RBP21.8■■□□□ 1.08
HDAC4-211ENST00000494800 SSH3Q8TE77 659 aa21.8■■□□□ 1.08
HDAC4-211ENST00000494800 DENND2AQ9ULE3 1009 aa21.8■■□□□ 1.08
HDAC4-211ENST00000494800 DDX19BQ9UMR2 479 aa21.8■■□□□ 1.08
HDAC4-211ENST00000494800 SCAF8Q9UPN6 1271 aaKnown RBP21.8■■□□□ 1.08
HDAC4-211ENST00000494800 PPP2R3BQ9Y5P8 575 aa21.8■■□□□ 1.08
HDAC4-211ENST00000494800 A0A1B0GUL7 405 aa21.79■■□□□ 1.08
HDAC4-211ENST00000494800 CRKP46108 304 aa21.79■■□□□ 1.08
HDAC4-211ENST00000494800 TNFAIP1Q13829 316 aa21.79■■□□□ 1.08
HDAC4-211ENST00000494800 POLA2Q14181 598 aa21.79■■□□□ 1.08
HDAC4-211ENST00000494800 GORABQ5T7V8 394 aa21.79■■□□□ 1.08
HDAC4-211ENST00000494800 TEKT1Q969V4 418 aa21.79■■□□□ 1.08
HDAC4-211ENST00000494800 PRMT6Q96LA8 375 aaPredicted RBP21.79■■□□□ 1.08
HDAC4-211ENST00000494800 NEUROD6Q96NK8 337 aa21.79■■□□□ 1.08
HDAC4-211ENST00000494800 VEZTQ9HBM0 779 aa21.79■■□□□ 1.08
HDAC4-211ENST00000494800 ARAP2Q8WZ64 1704 aa21.78■■□□□ 1.08
HDAC4-211ENST00000494800 CLRN2A0PK11 232 aa21.78■■□□□ 1.08
HDAC4-211ENST00000494800 MAP2K2P36507 400 aa21.78■■□□□ 1.08
HDAC4-211ENST00000494800 TIMM10P62072 90 aa21.78■■□□□ 1.08
HDAC4-211ENST00000494800 TTLL12Q14166 644 aaPredicted RBP21.78■■□□□ 1.08
HDAC4-211ENST00000494800 CCDC102BQ68D86 513 aa21.78■■□□□ 1.08
HDAC4-211ENST00000494800 RGMBQ6NW40 437 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms